EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000007891 (Gene tree)
Gene ID: 13033
Gene Symbol: Ctsd
Alias: CD|CatD
Full Name: cathepsin D
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 12128
Position: chr7: 142375911-142388038
Accession: 88562
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000151120	-	2127	-	ENSMUSP00000121203	410 (aa)	-	P18242
ENSMUST00000153679	-	591	-	-	- (aa)	-	-
ENSMUST00000066401	-	1922	-	ENSMUSP00000063904	404 (aa)	-	F8WIR1

Gene Model

Click here to download ENSMUSG00000007891's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04071	Sphingolipid signaling pathway	KEGG
mmu04140	Autophagy - animal	KEGG
mmu04142	Lysosome	KEGG
mmu04210	Apoptosis	KEGG
mmu04915	Estrogen signaling pathway	KEGG
mmu05152	Tuberculosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000007891's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000045	autophagosome assembly	15452145.	IMP	Process
GO:0004175	endopeptidase activity	26467158.	IDA	Function
GO:0004175	endopeptidase activity	-	ISO	Function
GO:0004190	aspartic-type endopeptidase activity	21873635.	IBA	Function
GO:0004190	aspartic-type endopeptidase activity	19293336.	IDA	Function
GO:0005515	protein binding	28453791.	IPI	Function
GO:0005576	extracellular region	-	IEA	Component
GO:0005615	extracellular space	19710420.	IDA	Component
GO:0005739	mitochondrion	14651853.	HDA	Component
GO:0005764	lysosome	21873635.	IBA	Component
GO:0005764	lysosome	9034150.9645704.10591619.12676993.12775715.15452145.16242638.26370502.	IDA	Component
GO:0005764	lysosome	18337546.	ISO	Component
GO:0006508	proteolysis	21873635.	IBA	Process
GO:0006508	proteolysis	15588329.	IC	Process
GO:0006508	proteolysis	-	ISO	Process
GO:0008233	peptidase activity	15588329.16423528.	IDA	Function
GO:0016787	hydrolase activity	19710420.	IDA	Function
GO:0030163	protein catabolic process	21873635.	IBA	Process
GO:0042277	peptide binding	-	ISO	Function
GO:0045121	membrane raft	-	ISO	Component
GO:0060441	epithelial tube branching involved in lung morphogenesis	17500053.	IMP	Process
GO:0062023	collagen-containing extracellular matrix	28071719.	HDA	Component