EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000008575 (Gene tree)
Gene ID: 18028
Gene Symbol: Nfib
Alias: 6720429L07Rik|E030026I10Rik
Full Name: nuclear factor I/B
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 415578
Position: chr4: 82290173-82705750
Accession: 103188
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000155821	-	685	-	ENSMUSP00000123169	174 (aa)	-	A2ADI3
ENSMUST00000122918	-	2699	-	-	- (aa)	-	-
ENSMUST00000107248	-	3294	-	ENSMUSP00000102869	569 (aa)	-	A2BG77
ENSMUST00000064770	-	8429	XM_017320021	ENSMUSP00000067629	420 (aa)	XP_017175510	P97863
ENSMUST00000107247	-	3267	-	ENSMUSP00000102868	560 (aa)	-	A2BG75
ENSMUST00000107246	-	3075	-	ENSMUSP00000102866	486 (aa)	-	A2BG76
ENSMUST00000107245	-	9116	XM_006537654	ENSMUSP00000102865	493 (aa)	XP_006537717	I7HIP8
ENSMUST00000140874	-	3308	-	-	- (aa)	-	-
ENSMUST00000050872	-	8770	XM_006537653	ENSMUSP00000052863	570 (aa)	XP_006537716	P97863
ENSMUST00000148982	-	2281	-	-	- (aa)	-	-
ENSMUST00000152588	-	379	-	-	- (aa)	-	-
ENSMUST00000135024	-	3835	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000008575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000008575's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	21873635.	IBA	Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	-	ISO	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	21513708.	IDA	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	17904922.	IMP	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	-	ISO	Function
GO:0001650	fibrillar center	-	ISO	Component
GO:0002062	chondrocyte differentiation	17904922.	IMP	Process
GO:0003677	DNA binding	-	ISO	Function
GO:0003690	double-stranded DNA binding	-	ISO	Function
GO:0003700	DNA-binding transcription factor activity	-	IEA	Function
GO:0003714	transcription corepressor activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	21513708.25403566.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0006260	DNA replication	-	IEA	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0008285	negative regulation of cell proliferation	15632069.	IMP	Process
GO:0009617	response to bacterium	23012479.	IEP	Process
GO:0010001	glial cell differentiation	19961580.	IMP	Process
GO:0021740	principal sensory nucleus of trigeminal nerve development	19107796.	IMP	Process
GO:0021960	anterior commissure morphogenesis	19961580.	IMP	Process
GO:0030324	lung development	11850179.15632069.	IMP	Process
GO:0030900	forebrain development	15632069.	IMP	Process
GO:0030902	hindbrain development	15632069.	IMP	Process
GO:0043392	negative regulation of DNA binding	-	ISO	Process
GO:0044300	cerebellar mossy fiber	19107796.	IDA	Component
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	9056636.19706729.21513708.	IDA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	17904922.	IMP	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0060486	Clara cell differentiation	21513708.	IMP	Process
GO:0060509	type I pneumocyte differentiation	21513708.	IMP	Process
GO:0060510	type II pneumocyte differentiation	21513708.	IMP	Process
GO:0060662	salivary gland cavitation	25403566.	IMP	Process
GO:0060689	cell differentiation involved in salivary gland development	25403566.	IMP	Process
GO:0061141	lung ciliated cell differentiation	21513708.	IMP	Process
GO:0071679	commissural neuron axon guidance	19961580.	IMP	Process
GO:1902894	negative regulation of pri-miRNA transcription by RNA polymerase II	-	ISO	Process
GO:2000791	negative regulation of mesenchymal cell proliferation involved in lung development	21513708.	IMP	Process
GO:2000795	negative regulation of epithelial cell proliferation involved in lung morphogenesis	21513708.	IMP	Process