EuRBPDB

Description

Ensembl ID: ENSMUSG00000010095 (Gene tree)
Gene ID: 17254
Gene Symbol: Slc3a2
Alias: 4F2HC|Cd98|Ly-10|Ly-m10|Mdu1|Mgp-2hc
Full Name: solute carrier family 3 (activators of dibasic and neutral amino acid transport)%2C member 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 16488
Position: chr19: 8706882-8723369
Accession: 96955
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000170157	-	2813	-	ENSMUSP00000130194	565 (aa)	-	P10852
ENSMUST00000205377	-	378	-	ENSMUSP00000146080	126 (aa)	-	A0A0U1RPQ7
ENSMUST00000206895	-	812	-	-	- (aa)	-	-
ENSMUST00000206560	-	480	-	ENSMUSP00000145809	113 (aa)	-	A0A0U1RP32
ENSMUST00000206598	-	1393	XM_006526733	ENSMUSP00000146016	303 (aa)	XP_006526796	A0A0U1RPK4
ENSMUST00000010239	-	1819	XM_017318078	ENSMUSP00000010239	526 (aa)	XP_017173567	P10852
ENSMUST00000206797	-	814	-	ENSMUSP00000145892	231 (aa)	-	A0A0U1RP98
ENSMUST00000205463	-	239	-	ENSMUSP00000146036	80 (aa)	-	A0A0U1RPL8
ENSMUST00000205538	-	402	-	ENSMUSP00000145974	109 (aa)	-	A0A0U1RPG5

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu04150	mTOR signaling pathway	KEGG
mmu04216	Ferroptosis	KEGG
mmu04974	Protein digestion and absorption	KEGG

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000010095	Slc3a2	100	87.826	ENSG00000168003	SLC3A2	100	86.667	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003725	double-stranded RNA binding	21266579.	ISO	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0005515	protein binding	10734121.23055941.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005975	carbohydrate metabolic process	-	IEA	Process
GO:0006865	amino acid transport	-	IEA	Process
GO:0009986	cell surface	-	ISO	Component
GO:0015175	neutral amino acid transmembrane transporter activity	-	ISO	Function
GO:0015804	neutral amino acid transport	-	ISO	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0043330	response to exogenous dsRNA	21266579.	ISO	Process
GO:0045202	synapse	24534009.	EXP	Component
GO:0045202	synapse	24534009.	IDA	Component
GO:1903801	L-leucine import across plasma membrane	-	ISO	Process