EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000010362 (Gene tree)
Gene ID: 66599
Gene Symbol: Rdm1
Alias: 2410008M22Rik|Rad52b
Full Name: RAD52 motif 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 8906 bases
Position: chr11:101627195-101636100
Accession: 1913849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000010506	RRM_1	PF00076.22	3.6e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000155222	-	463	-	-	- (aa)	-	-
ENSMUST00000010506	-	1124	XM_006533945	ENSMUSP00000010506	281 (aa)	XP_006534008	Q9CQK3
ENSMUST00000139037	-	795	-	-	- (aa)	-	-
ENSMUST00000152484	-	434	-	-	- (aa)	-	-
ENSMUST00000133727	-	985	-	ENSMUSP00000118996	127 (aa)	-	F6W1D5

Gene Model

Click here to download ENSMUSG00000010362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000010362's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000010362	Rdm1	99	72.143	ENSG00000278023	RDM1	97	81.955	Homo_sapiens
ENSMUSG00000010362	Rdm1	88	33.597	ENSAPEG00000008929	zgc:103564	92	33.865	Amphiprion_percula
ENSMUSG00000010362	Rdm1	86	53.061	ENSAPLG00000004384	RDM1	94	53.061	Anas_platyrhynchos
ENSMUSG00000010362	Rdm1	97	46.786	ENSACAG00000012989	-	100	46.786	Anolis_carolinensis
ENSMUSG00000010362	Rdm1	99	72.500	ENSANAG00000032752	RDM1	96	81.203	Aotus_nancymaae
ENSMUSG00000010362	Rdm1	99	71.174	ENSBTAG00000000030	RDM1	99	71.174	Bos_taurus
ENSMUSG00000010362	Rdm1	89	74.603	ENSCJAG00000015031	RDM1	96	83.459	Callithrix_jacchus
ENSMUSG00000010362	Rdm1	88	65.234	ENSCAFG00000015160	-	99	65.098	Canis_familiaris
ENSMUSG00000010362	Rdm1	99	71.530	ENSCHIG00000020607	RDM1	99	71.530	Capra_hircus
ENSMUSG00000010362	Rdm1	99	67.730	ENSCPOG00000001495	-	98	67.730	Cavia_porcellus
ENSMUSG00000010362	Rdm1	96	72.059	ENSCCAG00000035763	RDM1	96	81.955	Cebus_capucinus
ENSMUSG00000010362	Rdm1	99	73.929	ENSCATG00000044451	RDM1	96	83.459	Cercocebus_atys
ENSMUSG00000010362	Rdm1	92	72.137	ENSCSAG00000006209	RDM1	98	72.137	Chlorocebus_sabaeus
ENSMUSG00000010362	Rdm1	80	51.965	ENSCPBG00000009105	RDM1	97	50.588	Chrysemys_picta_bellii
ENSMUSG00000010362	Rdm1	99	72.857	ENSCANG00000041322	RDM1	95	80.000	Colobus_angolensis_palliatus
ENSMUSG00000010362	Rdm1	96	84.758	ENSCGRG00001015927	Rdm1	99	84.838	Cricetulus_griseus_chok1gshd
ENSMUSG00000010362	Rdm1	89	33.202	ENSCVAG00000001956	zgc:103564	89	33.333	Cyprinodon_variegatus
ENSMUSG00000010362	Rdm1	87	75.403	ENSDNOG00000045224	-	92	75.403	Dasypus_novemcinctus
ENSMUSG00000010362	Rdm1	70	71.078	ENSEASG00005010554	RDM1	71	71.078	Equus_asinus_asinus
ENSMUSG00000010362	Rdm1	90	71.863	ENSECAG00000022182	RDM1	90	72.727	Equus_caballus
ENSMUSG00000010362	Rdm1	87	70.445	ENSEEUG00000006127	RDM1	98	70.445	Erinaceus_europaeus
ENSMUSG00000010362	Rdm1	80	75.330	ENSFCAG00000043429	RDM1	96	83.459	Felis_catus
ENSMUSG00000010362	Rdm1	97	53.261	ENSGALG00000000243	RDM1	97	53.261	Gallus_gallus
ENSMUSG00000010362	Rdm1	86	52.610	ENSGAGG00000000293	-	78	52.610	Gopherus_agassizii
ENSMUSG00000010362	Rdm1	99	72.857	ENSGGOG00000010584	RDM1	96	81.955	Gorilla_gorilla
ENSMUSG00000010362	Rdm1	98	34.050	ENSHCOG00000002518	-	89	35.743	Hippocampus_comes
ENSMUSG00000010362	Rdm1	98	74.194	ENSSTOG00000022491	RDM1	98	74.194	Ictidomys_tridecemlineatus
ENSMUSG00000010362	Rdm1	99	70.213	ENSLAFG00000029300	RDM1	99	70.213	Loxodonta_africana
ENSMUSG00000010362	Rdm1	99	73.571	ENSMFAG00000032968	RDM1	96	83.459	Macaca_fascicularis
ENSMUSG00000010362	Rdm1	99	73.929	ENSMMUG00000006847	RDM1	95	80.870	Macaca_mulatta
ENSMUSG00000010362	Rdm1	99	73.571	ENSMNEG00000039977	RDM1	96	83.459	Macaca_nemestrina
ENSMUSG00000010362	Rdm1	99	73.929	ENSMLEG00000041158	RDM1	95	80.870	Mandrillus_leucophaeus
ENSMUSG00000010362	Rdm1	91	51.163	ENSMGAG00000008774	RDM1	96	53.719	Meleagris_gallopavo
ENSMUSG00000010362	Rdm1	100	83.986	ENSMAUG00000018559	Rdm1	100	83.986	Mesocricetus_auratus
ENSMUSG00000010362	Rdm1	99	74.286	ENSMICG00000038651	RDM1	99	74.286	Microcebus_murinus
ENSMUSG00000010362	Rdm1	97	79.853	ENSMOCG00000015095	Rdm1	99	78.755	Microtus_ochrogaster
ENSMUSG00000010362	Rdm1	97	60.507	ENSMODG00000011101	RDM1	100	60.507	Monodelphis_domestica
ENSMUSG00000010362	Rdm1	100	95.730	MGP_CAROLIEiJ_G0017226	Rdm1	100	95.730	Mus_caroli
ENSMUSG00000010362	Rdm1	100	93.238	MGP_PahariEiJ_G0018356	Rdm1	100	93.238	Mus_pahari
ENSMUSG00000010362	Rdm1	100	97.153	MGP_SPRETEiJ_G0018069	Rdm1	100	97.153	Mus_spretus
ENSMUSG00000010362	Rdm1	98	75.445	ENSMPUG00000008363	RDM1	98	75.445	Mustela_putorius_furo
ENSMUSG00000010362	Rdm1	99	73.929	ENSNLEG00000014173	RDM1	91	83.333	Nomascus_leucogenys
ENSMUSG00000010362	Rdm1	88	61.355	ENSMEUG00000015826	RDM1	98	62.041	Notamacropus_eugenii
ENSMUSG00000010362	Rdm1	91	69.615	ENSOCUG00000022704	RDM1	97	70.518	Oryctolagus_cuniculus
ENSMUSG00000010362	Rdm1	99	72.500	ENSOGAG00000011332	RDM1	99	72.500	Otolemur_garnettii
ENSMUSG00000010362	Rdm1	99	73.214	ENSPPAG00000029969	RDM1	99	73.214	Pan_paniscus
ENSMUSG00000010362	Rdm1	99	73.571	ENSPTRG00000009031	RDM1	96	82.707	Pan_troglodytes
ENSMUSG00000010362	Rdm1	99	73.929	ENSPANG00000022933	RDM1	96	83.459	Papio_anubis
ENSMUSG00000010362	Rdm1	96	82.528	ENSPEMG00000018985	Rdm1	99	81.949	Peromyscus_maniculatus_bairdii
ENSMUSG00000010362	Rdm1	99	72.143	ENSPPYG00000008198	RDM1	99	72.143	Pongo_abelii
ENSMUSG00000010362	Rdm1	99	71.429	ENSPCOG00000017995	RDM1	96	78.947	Propithecus_coquereli
ENSMUSG00000010362	Rdm1	88	72.510	ENSPVAG00000001116	RDM1	99	72.400	Pteropus_vampyrus
ENSMUSG00000010362	Rdm1	100	92.171	ENSRNOG00000020751	Rdm1	100	92.171	Rattus_norvegicus
ENSMUSG00000010362	Rdm1	99	72.857	ENSRBIG00000030000	RDM1	96	83.459	Rhinopithecus_bieti
ENSMUSG00000010362	Rdm1	99	73.214	ENSRROG00000035242	RDM1	95	80.870	Rhinopithecus_roxellana
ENSMUSG00000010362	Rdm1	97	64.130	ENSSHAG00000013584	RDM1	100	64.130	Sarcophilus_harrisii
ENSMUSG00000010362	Rdm1	91	50.570	ENSSPUG00000010941	RDM1	89	50.598	Sphenodon_punctatus
ENSMUSG00000010362	Rdm1	90	32.685	ENSSPAG00000011690	-	86	33.613	Stegastes_partitus
ENSMUSG00000010362	Rdm1	87	60.246	ENSSSCG00000017574	-	93	65.158	Sus_scrofa
ENSMUSG00000010362	Rdm1	88	57.371	ENSTBEG00000010030	RDM1	99	57.371	Tupaia_belangeri
ENSMUSG00000010362	Rdm1	98	76.703	ENSUAMG00000027279	RDM1	98	76.703	Ursus_americanus
ENSMUSG00000010362	Rdm1	98	76.703	ENSUMAG00000015423	RDM1	96	76.703	Ursus_maritimus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008150	biological_process	-	ND	Process