EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000011306 (Gene tree)
Gene ID: 70616
Gene Symbol: Sugp1
Alias: Sf4
Full Name: SURP and G patch domain containing 1
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 29535 bases
Position: chr8:70042813-70072347
Accession: 1917866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000011450	Surp	PF01805.20	2.7e-29	1	2
ENSMUSP00000011450	Surp	PF01805.20	2.7e-29	2	2
ENSMUSP00000011450	G-patch	PF01585.23	4.7e-14	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000011450	-	2681	XM_006509738	ENSMUSP00000011450	643 (aa)	XP_006509801	Q8CH02
ENSMUST00000213035	-	2239	-	-	- (aa)	-	-
ENSMUST00000211808	-	2963	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000011306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000011306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000011306	Sugp1	100	88.099	ENSG00000105705	SUGP1	100	89.855	Homo_sapiens
ENSMUSG00000011306	Sugp1	98	60.247	ENSAPOG00000004189	SUGP1	99	60.401	Acanthochromis_polyacanthus
ENSMUSG00000011306	Sugp1	100	86.708	ENSAMEG00000011838	SUGP1	100	86.708	Ailuropoda_melanoleuca
ENSMUSG00000011306	Sugp1	99	58.788	ENSACIG00000018294	SUGP1	99	58.939	Amphilophus_citrinellus
ENSMUSG00000011306	Sugp1	98	60.000	ENSAOCG00000016128	SUGP1	99	60.154	Amphiprion_ocellaris
ENSMUSG00000011306	Sugp1	98	60.154	ENSAPEG00000012114	SUGP1	99	60.308	Amphiprion_percula
ENSMUSG00000011306	Sugp1	99	58.931	ENSATEG00000015089	SUGP1	100	58.626	Anabas_testudineus
ENSMUSG00000011306	Sugp1	98	74.259	ENSAPLG00000002500	SUGP1	98	75.078	Anas_platyrhynchos
ENSMUSG00000011306	Sugp1	70	73.196	ENSACAG00000008769	SUGP1	94	74.227	Anolis_carolinensis
ENSMUSG00000011306	Sugp1	100	88.099	ENSANAG00000028538	SUGP1	100	88.717	Aotus_nancymaae
ENSMUSG00000011306	Sugp1	97	59.813	ENSACLG00000002221	SUGP1	97	59.813	Astatotilapia_calliptera
ENSMUSG00000011306	Sugp1	96	60.000	ENSAMXG00000002872	SUGP1	98	60.127	Astyanax_mexicanus
ENSMUSG00000011306	Sugp1	100	86.314	ENSBTAG00000006116	SUGP1	100	86.314	Bos_taurus
ENSMUSG00000011306	Sugp1	100	88.253	ENSCJAG00000005755	SUGP1	100	88.253	Callithrix_jacchus
ENSMUSG00000011306	Sugp1	100	87.578	ENSCAFG00000014314	SUGP1	100	87.578	Canis_familiaris
ENSMUSG00000011306	Sugp1	100	87.017	ENSCAFG00020012508	SUGP1	100	87.017	Canis_lupus_dingo
ENSMUSG00000011306	Sugp1	100	86.090	ENSCHIG00000024169	SUGP1	100	87.132	Capra_hircus
ENSMUSG00000011306	Sugp1	100	85.100	ENSTSYG00000005329	SUGP1	100	86.883	Carlito_syrichta
ENSMUSG00000011306	Sugp1	98	84.891	ENSCAPG00000010672	SUGP1	100	85.358	Cavia_aperea
ENSMUSG00000011306	Sugp1	100	85.015	ENSCPOG00000007797	SUGP1	100	85.474	Cavia_porcellus
ENSMUSG00000011306	Sugp1	100	87.481	ENSCCAG00000024177	SUGP1	100	88.408	Cebus_capucinus
ENSMUSG00000011306	Sugp1	96	62.798	ENSCATG00000033580	-	98	62.480	Cercocebus_atys
ENSMUSG00000011306	Sugp1	100	87.481	ENSCATG00000033059	SUGP1	100	88.563	Cercocebus_atys
ENSMUSG00000011306	Sugp1	100	87.017	ENSCLAG00000003512	SUGP1	100	87.172	Chinchilla_lanigera
ENSMUSG00000011306	Sugp1	99	90.638	ENSCSAG00000005148	SUGP1	100	90.638	Chlorocebus_sabaeus
ENSMUSG00000011306	Sugp1	99	75.194	ENSCPBG00000012455	SUGP1	100	75.504	Chrysemys_picta_bellii
ENSMUSG00000011306	Sugp1	100	87.635	ENSCANG00000035428	SUGP1	100	88.717	Colobus_angolensis_palliatus
ENSMUSG00000011306	Sugp1	100	94.729	ENSCGRG00001021250	Sugp1	100	94.574	Cricetulus_griseus_chok1gshd
ENSMUSG00000011306	Sugp1	100	93.643	ENSCGRG00000014265	Sugp1	100	94.471	Cricetulus_griseus_crigri
ENSMUSG00000011306	Sugp1	97	58.954	ENSCSEG00000014421	SUGP1	97	59.494	Cynoglossus_semilaevis
ENSMUSG00000011306	Sugp1	97	59.168	ENSCVAG00000004765	SUGP1	98	58.706	Cyprinodon_variegatus
ENSMUSG00000011306	Sugp1	79	53.356	ENSEBUG00000016994	SUGP1	87	53.356	Eptatretus_burgeri
ENSMUSG00000011306	Sugp1	98	86.457	ENSEASG00005006593	SUGP1	95	86.635	Equus_asinus_asinus
ENSMUSG00000011306	Sugp1	100	86.667	ENSECAG00000013871	SUGP1	100	86.842	Equus_caballus
ENSMUSG00000011306	Sugp1	99	59.265	ENSELUG00000001358	SUGP1	99	59.697	Esox_lucius
ENSMUSG00000011306	Sugp1	100	87.326	ENSFCAG00000009779	SUGP1	100	87.326	Felis_catus
ENSMUSG00000011306	Sugp1	73	77.801	ENSFALG00000010583	-	100	79.036	Ficedula_albicollis
ENSMUSG00000011306	Sugp1	100	83.964	ENSFDAG00000014261	SUGP1	100	84.115	Fukomys_damarensis
ENSMUSG00000011306	Sugp1	97	57.543	ENSFHEG00000002556	SUGP1	98	58.009	Fundulus_heteroclitus
ENSMUSG00000011306	Sugp1	99	57.430	ENSGMOG00000012159	SUGP1	99	58.050	Gadus_morhua
ENSMUSG00000011306	Sugp1	99	75.000	ENSGALG00000042132	SUGP1	99	76.316	Gallus_gallus
ENSMUSG00000011306	Sugp1	98	58.282	ENSGAFG00000008550	SUGP1	99	57.975	Gambusia_affinis
ENSMUSG00000011306	Sugp1	99	57.935	ENSGACG00000015222	SUGP1	99	58.833	Gasterosteus_aculeatus
ENSMUSG00000011306	Sugp1	99	75.194	ENSGAGG00000022764	SUGP1	100	75.542	Gopherus_agassizii
ENSMUSG00000011306	Sugp1	100	87.944	ENSGGOG00000002984	SUGP1	100	89.181	Gorilla_gorilla
ENSMUSG00000011306	Sugp1	97	59.346	ENSHBUG00000022000	SUGP1	97	59.346	Haplochromis_burtoni
ENSMUSG00000011306	Sugp1	100	87.365	ENSHGLG00000004593	SUGP1	100	87.365	Heterocephalus_glaber_female
ENSMUSG00000011306	Sugp1	100	87.365	ENSHGLG00100006097	SUGP1	100	87.365	Heterocephalus_glaber_male
ENSMUSG00000011306	Sugp1	99	54.587	ENSHCOG00000001195	SUGP1	96	62.172	Hippocampus_comes
ENSMUSG00000011306	Sugp1	99	59.660	ENSIPUG00000006883	sugp1	99	59.872	Ictalurus_punctatus
ENSMUSG00000011306	Sugp1	100	88.117	ENSSTOG00000001020	SUGP1	100	89.506	Ictidomys_tridecemlineatus
ENSMUSG00000011306	Sugp1	100	88.700	ENSJJAG00000013477	Sugp1	100	88.700	Jaculus_jaculus
ENSMUSG00000011306	Sugp1	98	57.757	ENSKMAG00000006042	SUGP1	99	57.757	Kryptolebias_marmoratus
ENSMUSG00000011306	Sugp1	99	56.528	ENSLBEG00000000335	SUGP1	99	56.375	Labrus_bergylta
ENSMUSG00000011306	Sugp1	99	68.478	ENSLACG00000011311	SUGP1	100	68.789	Latimeria_chalumnae
ENSMUSG00000011306	Sugp1	88	63.714	ENSLOCG00000005094	SUGP1	99	63.959	Lepisosteus_oculatus
ENSMUSG00000011306	Sugp1	100	84.923	ENSLAFG00000017363	SUGP1	100	84.923	Loxodonta_africana
ENSMUSG00000011306	Sugp1	100	87.635	ENSMFAG00000031157	SUGP1	100	88.717	Macaca_fascicularis
ENSMUSG00000011306	Sugp1	96	87.419	ENSMMUG00000028834	SUGP1	100	88.548	Macaca_mulatta
ENSMUSG00000011306	Sugp1	98	61.562	ENSMNEG00000035574	-	100	62.090	Macaca_nemestrina
ENSMUSG00000011306	Sugp1	100	87.790	ENSMNEG00000042010	SUGP1	100	88.872	Macaca_nemestrina
ENSMUSG00000011306	Sugp1	100	84.564	ENSMLEG00000043364	SUGP1	100	86.913	Mandrillus_leucophaeus
ENSMUSG00000011306	Sugp1	97	59.341	ENSMAMG00000010022	SUGP1	98	59.027	Mastacembelus_armatus
ENSMUSG00000011306	Sugp1	97	59.657	ENSMZEG00005025588	SUGP1	97	59.657	Maylandia_zebra
ENSMUSG00000011306	Sugp1	97	71.860	ENSMAUG00000016683	Sugp1	95	89.073	Mesocricetus_auratus
ENSMUSG00000011306	Sugp1	100	94.884	ENSMOCG00000014670	Sugp1	100	95.194	Microtus_ochrogaster
ENSMUSG00000011306	Sugp1	98	58.114	ENSMMOG00000010675	SUGP1	98	57.960	Mola_mola
ENSMUSG00000011306	Sugp1	99	79.412	ENSMODG00000007089	SUGP1	99	79.567	Monodelphis_domestica
ENSMUSG00000011306	Sugp1	97	56.630	ENSMALG00000020217	SUGP1	97	57.009	Monopterus_albus
ENSMUSG00000011306	Sugp1	100	99.378	MGP_CAROLIEiJ_G0031126	Sugp1	100	99.378	Mus_caroli
ENSMUSG00000011306	Sugp1	100	99.222	MGP_PahariEiJ_G0021591	Sugp1	100	99.222	Mus_pahari
ENSMUSG00000011306	Sugp1	100	99.844	MGP_SPRETEiJ_G0032244	Sugp1	100	99.844	Mus_spretus
ENSMUSG00000011306	Sugp1	100	86.708	ENSMPUG00000015404	SUGP1	100	87.578	Mustela_putorius_furo
ENSMUSG00000011306	Sugp1	100	85.537	ENSMLUG00000017360	SUGP1	100	85.449	Myotis_lucifugus
ENSMUSG00000011306	Sugp1	89	91.986	ENSNGAG00000018965	Sugp1	99	91.986	Nannospalax_galili
ENSMUSG00000011306	Sugp1	100	82.972	ENSNLEG00000006236	SUGP1	100	82.972	Nomascus_leucogenys
ENSMUSG00000011306	Sugp1	88	76.190	ENSMEUG00000013320	SUGP1	81	76.190	Notamacropus_eugenii
ENSMUSG00000011306	Sugp1	100	76.758	ENSOPRG00000004247	SUGP1	100	78.000	Ochotona_princeps
ENSMUSG00000011306	Sugp1	100	86.862	ENSODEG00000011538	SUGP1	100	86.862	Octodon_degus
ENSMUSG00000011306	Sugp1	97	58.399	ENSONIG00000010178	SUGP1	97	58.556	Oreochromis_niloticus
ENSMUSG00000011306	Sugp1	99	58.824	ENSORLG00000015411	SUGP1	99	58.824	Oryzias_latipes
ENSMUSG00000011306	Sugp1	99	57.975	ENSORLG00020017049	SUGP1	98	58.750	Oryzias_latipes_hni
ENSMUSG00000011306	Sugp1	97	59.468	ENSORLG00015016798	SUGP1	98	58.594	Oryzias_latipes_hsok
ENSMUSG00000011306	Sugp1	97	59.098	ENSOMEG00000021298	SUGP1	98	59.098	Oryzias_melastigma
ENSMUSG00000011306	Sugp1	100	86.090	ENSOGAG00000009975	-	100	87.172	Otolemur_garnettii
ENSMUSG00000011306	Sugp1	100	82.716	ENSOARG00000008152	SUGP1	100	83.129	Ovis_aries
ENSMUSG00000011306	Sugp1	100	87.944	ENSPPAG00000037102	SUGP1	100	89.181	Pan_paniscus
ENSMUSG00000011306	Sugp1	100	87.326	ENSPPRG00000000880	SUGP1	100	87.326	Panthera_pardus
ENSMUSG00000011306	Sugp1	100	86.244	ENSPTIG00000013061	SUGP1	100	87.326	Panthera_tigris_altaica
ENSMUSG00000011306	Sugp1	100	87.944	ENSPTRG00000010737	SUGP1	100	89.181	Pan_troglodytes
ENSMUSG00000011306	Sugp1	96	63.158	ENSPANG00000008180	-	98	62.839	Papio_anubis
ENSMUSG00000011306	Sugp1	100	87.635	ENSPANG00000014398	SUGP1	100	88.563	Papio_anubis
ENSMUSG00000011306	Sugp1	96	62.205	ENSPKIG00000010747	SUGP1	97	62.362	Paramormyrops_kingsleyae
ENSMUSG00000011306	Sugp1	99	74.149	ENSPSIG00000016889	SUGP1	100	75.523	Pelodiscus_sinensis
ENSMUSG00000011306	Sugp1	100	55.673	ENSPMGG00000017278	SUGP1	100	56.127	Periophthalmus_magnuspinnatus
ENSMUSG00000011306	Sugp1	100	96.579	ENSPEMG00000009253	Sugp1	100	96.579	Peromyscus_maniculatus_bairdii
ENSMUSG00000011306	Sugp1	95	51.278	ENSPMAG00000009332	SUGP1	100	51.278	Petromyzon_marinus
ENSMUSG00000011306	Sugp1	98	57.831	ENSPFOG00000015785	SUGP1	99	57.530	Poecilia_formosa
ENSMUSG00000011306	Sugp1	100	57.078	ENSPLAG00000010995	SUGP1	99	57.919	Poecilia_latipinna
ENSMUSG00000011306	Sugp1	100	58.108	ENSPMEG00000000020	SUGP1	100	57.808	Poecilia_mexicana
ENSMUSG00000011306	Sugp1	99	57.704	ENSPREG00000017966	SUGP1	99	57.402	Poecilia_reticulata
ENSMUSG00000011306	Sugp1	100	83.359	ENSPPYG00000009766	SUGP1	100	84.603	Pongo_abelii
ENSMUSG00000011306	Sugp1	58	94.030	ENSPCAG00000014760	SUGP1	57	94.030	Procavia_capensis
ENSMUSG00000011306	Sugp1	100	87.635	ENSPCOG00000017524	SUGP1	100	88.563	Propithecus_coquereli
ENSMUSG00000011306	Sugp1	100	84.496	ENSPVAG00000017451	SUGP1	100	84.496	Pteropus_vampyrus
ENSMUSG00000011306	Sugp1	96	61.146	ENSPNAG00000004723	SUGP1	96	61.085	Pygocentrus_nattereri
ENSMUSG00000011306	Sugp1	100	97.050	ENSRNOG00000052111	Sugp1	100	97.050	Rattus_norvegicus
ENSMUSG00000011306	Sugp1	98	64.511	ENSRBIG00000037600	-	97	64.038	Rhinopithecus_bieti
ENSMUSG00000011306	Sugp1	100	77.761	ENSRBIG00000035555	SUGP1	100	78.834	Rhinopithecus_bieti
ENSMUSG00000011306	Sugp1	100	87.790	ENSRROG00000030048	SUGP1	100	88.872	Rhinopithecus_roxellana
ENSMUSG00000011306	Sugp1	98	62.871	ENSRROG00000031017	-	100	62.246	Rhinopithecus_roxellana
ENSMUSG00000011306	Sugp1	100	87.481	ENSSBOG00000020160	SUGP1	100	88.408	Saimiri_boliviensis_boliviensis
ENSMUSG00000011306	Sugp1	99	78.727	ENSSHAG00000012361	SUGP1	100	79.037	Sarcophilus_harrisii
ENSMUSG00000011306	Sugp1	98	60.433	ENSSFOG00015010075	sugp1	100	61.587	Scleropages_formosus
ENSMUSG00000011306	Sugp1	97	59.720	ENSSMAG00000002495	SUGP1	97	59.906	Scophthalmus_maximus
ENSMUSG00000011306	Sugp1	97	60.000	ENSSDUG00000016002	SUGP1	98	60.781	Seriola_dumerili
ENSMUSG00000011306	Sugp1	97	60.000	ENSSLDG00000011109	SUGP1	98	60.625	Seriola_lalandi_dorsalis
ENSMUSG00000011306	Sugp1	98	76.145	ENSSPUG00000007840	SUGP1	99	77.251	Sphenodon_punctatus
ENSMUSG00000011306	Sugp1	98	59.322	ENSSPAG00000023010	SUGP1	99	59.476	Stegastes_partitus
ENSMUSG00000011306	Sugp1	100	83.926	ENSSSCG00000036970	SUGP1	100	84.759	Sus_scrofa
ENSMUSG00000011306	Sugp1	97	58.610	ENSTRUG00000009724	SUGP1	98	59.148	Takifugu_rubripes
ENSMUSG00000011306	Sugp1	97	58.610	ENSTNIG00000015312	SUGP1	100	59.429	Tetraodon_nigroviridis
ENSMUSG00000011306	Sugp1	73	97.037	ENSTBEG00000016501	-	73	97.037	Tupaia_belangeri
ENSMUSG00000011306	Sugp1	100	86.047	ENSTTRG00000009868	SUGP1	100	86.047	Tursiops_truncatus
ENSMUSG00000011306	Sugp1	100	83.951	ENSUAMG00000000010	-	100	83.951	Ursus_americanus
ENSMUSG00000011306	Sugp1	92	86.074	ENSUMAG00000006358	SUGP1	100	86.074	Ursus_maritimus
ENSMUSG00000011306	Sugp1	80	89.216	ENSVPAG00000002122	SUGP1	87	89.216	Vicugna_pacos
ENSMUSG00000011306	Sugp1	100	86.687	ENSVVUG00000007569	SUGP1	100	86.687	Vulpes_vulpes
ENSMUSG00000011306	Sugp1	99	65.319	ENSXETG00000013044	sugp1	100	65.630	Xenopus_tropicalis
ENSMUSG00000011306	Sugp1	97	59.119	ENSXCOG00000008238	SUGP1	97	58.805	Xiphophorus_couchianus
ENSMUSG00000011306	Sugp1	98	57.622	ENSXMAG00000019331	SUGP1	99	57.317	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0006396	RNA processing	-	IEA	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process