EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000011837 (Gene tree)
Gene ID: 102209
Gene Symbol: Snapc2
Alias: 0610007H10Rik
Full Name: small nuclear RNA activating complex%2C polypeptide 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 3141 bases
Position: chr8:4253080-4256220
Accession: 1914861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000011981	SnAPC_2_like	PF11035.8	1.7e-137	1	1
ENSMUSP00000146771	SnAPC_2_like	PF11035.8	4.3e-101	1	2
ENSMUSP00000146771	SnAPC_2_like	PF11035.8	4.3e-101	2	2
ENSMUSP00000146560	SnAPC_2_like	PF11035.8	8.5e-78	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000011981	-	1536	-	ENSMUSP00000011981	359 (aa)	-	Q91XA5
ENSMUST00000208459	-	956	XM_006508683	ENSMUSP00000146560	222 (aa)	XP_006508746	A0A140LHV3
ENSMUST00000208110	-	428	-	ENSMUSP00000146378	55 (aa)	-	A0A140LHE1
ENSMUST00000208316	-	1190	-	ENSMUSP00000146771	249 (aa)	-	A0A140LID1

Gene Model

Click here to download ENSMUSG00000011837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000011837's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000011837	Snapc2	95	66.964	ENSG00000104976	SNAPC2	100	60.446	Homo_sapiens
ENSMUSG00000011837	Snapc2	98	60.305	ENSAMEG00000008622	SNAPC2	99	57.143	Ailuropoda_melanoleuca
ENSMUSG00000011837	Snapc2	75	33.113	ENSAPEG00000010950	-	61	33.113	Amphiprion_percula
ENSMUSG00000011837	Snapc2	74	34.194	ENSATEG00000003573	-	63	32.323	Anabas_testudineus
ENSMUSG00000011837	Snapc2	97	43.860	ENSACAG00000026540	-	98	38.360	Anolis_carolinensis
ENSMUSG00000011837	Snapc2	100	60.167	ENSANAG00000029939	SNAPC2	100	60.167	Aotus_nancymaae
ENSMUSG00000011837	Snapc2	70	31.169	ENSACLG00000013092	-	58	32.680	Astatotilapia_calliptera
ENSMUSG00000011837	Snapc2	54	30.120	ENSAMXG00000038205	snapc2	57	30.204	Astyanax_mexicanus
ENSMUSG00000011837	Snapc2	98	64.800	ENSBTAG00000014926	SNAPC2	99	59.270	Bos_taurus
ENSMUSG00000011837	Snapc2	95	69.643	ENSCJAG00000006117	SNAPC2	100	60.724	Callithrix_jacchus
ENSMUSG00000011837	Snapc2	100	65.600	ENSCAFG00000031676	SNAPC2	100	59.116	Canis_familiaris
ENSMUSG00000011837	Snapc2	100	65.600	ENSCAFG00020022851	SNAPC2	100	59.116	Canis_lupus_dingo
ENSMUSG00000011837	Snapc2	99	59.641	ENSTSYG00000037088	SNAPC2	99	63.722	Carlito_syrichta
ENSMUSG00000011837	Snapc2	54	62.319	ENSCAPG00000013921	-	99	62.319	Cavia_aperea
ENSMUSG00000011837	Snapc2	100	61.702	ENSCPOG00000034229	SNAPC2	100	56.743	Cavia_porcellus
ENSMUSG00000011837	Snapc2	95	67.857	ENSCCAG00000034172	SNAPC2	100	60.724	Cebus_capucinus
ENSMUSG00000011837	Snapc2	95	67.857	ENSCATG00000037131	SNAPC2	100	61.838	Cercocebus_atys
ENSMUSG00000011837	Snapc2	100	64.000	ENSCLAG00000006885	SNAPC2	100	61.186	Chinchilla_lanigera
ENSMUSG00000011837	Snapc2	95	66.964	ENSCSAG00000008167	SNAPC2	100	61.281	Chlorocebus_sabaeus
ENSMUSG00000011837	Snapc2	96	46.281	ENSCPBG00000002277	SNAPC2	76	46.281	Chrysemys_picta_bellii
ENSMUSG00000011837	Snapc2	95	66.964	ENSCANG00000040525	SNAPC2	100	61.003	Colobus_angolensis_palliatus
ENSMUSG00000011837	Snapc2	100	80.800	ENSCGRG00001006223	Snapc2	100	79.666	Cricetulus_griseus_chok1gshd
ENSMUSG00000011837	Snapc2	100	76.577	ENSCGRG00000005622	Snapc2	98	76.510	Cricetulus_griseus_crigri
ENSMUSG00000011837	Snapc2	78	33.108	ENSCSEG00000014882	-	61	33.108	Cynoglossus_semilaevis
ENSMUSG00000011837	Snapc2	83	32.057	ENSCVAG00000011360	-	89	31.741	Cyprinodon_variegatus
ENSMUSG00000011837	Snapc2	75	38.281	ENSDARG00000036473	snapc2	58	30.400	Danio_rerio
ENSMUSG00000011837	Snapc2	99	64.800	ENSDNOG00000036458	SNAPC2	98	57.618	Dasypus_novemcinctus
ENSMUSG00000011837	Snapc2	96	58.960	ENSDORG00000009155	Snapc2	100	68.367	Dipodomys_ordii
ENSMUSG00000011837	Snapc2	99	57.618	ENSETEG00000012986	SNAPC2	99	57.618	Echinops_telfairi
ENSMUSG00000011837	Snapc2	100	72.000	ENSEASG00005003809	SNAPC2	100	65.470	Equus_asinus_asinus
ENSMUSG00000011837	Snapc2	100	61.456	ENSECAG00000011011	SNAPC2	100	64.641	Equus_caballus
ENSMUSG00000011837	Snapc2	100	70.400	ENSFCAG00000014945	SNAPC2	100	61.602	Felis_catus
ENSMUSG00000011837	Snapc2	94	60.577	ENSFDAG00000001564	SNAPC2	100	63.889	Fukomys_damarensis
ENSMUSG00000011837	Snapc2	51	37.762	ENSGACG00000000727	-	97	37.762	Gasterosteus_aculeatus
ENSMUSG00000011837	Snapc2	97	47.458	ENSGAGG00000015845	SNAPC2	99	38.771	Gopherus_agassizii
ENSMUSG00000011837	Snapc2	95	71.910	ENSGGOG00000022392	SNAPC2	100	60.167	Gorilla_gorilla
ENSMUSG00000011837	Snapc2	98	63.158	ENSHGLG00000011707	SNAPC2	98	62.079	Heterocephalus_glaber_female
ENSMUSG00000011837	Snapc2	98	63.158	ENSHGLG00100003422	SNAPC2	98	57.641	Heterocephalus_glaber_male
ENSMUSG00000011837	Snapc2	85	33.333	ENSHCOG00000002795	-	97	31.383	Hippocampus_comes
ENSMUSG00000011837	Snapc2	100	61.878	ENSSTOG00000009102	SNAPC2	100	61.878	Ictidomys_tridecemlineatus
ENSMUSG00000011837	Snapc2	100	73.494	ENSJJAG00000003060	Snapc2	100	73.494	Jaculus_jaculus
ENSMUSG00000011837	Snapc2	98	39.286	ENSLOCG00000014065	snapc2	100	35.561	Lepisosteus_oculatus
ENSMUSG00000011837	Snapc2	100	62.590	ENSLAFG00000023323	SNAPC2	100	56.948	Loxodonta_africana
ENSMUSG00000011837	Snapc2	92	71.910	ENSMFAG00000034273	SNAPC2	100	61.560	Macaca_fascicularis
ENSMUSG00000011837	Snapc2	95	67.857	ENSMMUG00000006540	SNAPC2	100	61.560	Macaca_mulatta
ENSMUSG00000011837	Snapc2	92	71.910	ENSMNEG00000039547	SNAPC2	100	61.003	Macaca_nemestrina
ENSMUSG00000011837	Snapc2	95	67.857	ENSMLEG00000031059	SNAPC2	100	61.838	Mandrillus_leucophaeus
ENSMUSG00000011837	Snapc2	74	35.659	ENSMAMG00000018195	-	56	35.659	Mastacembelus_armatus
ENSMUSG00000011837	Snapc2	70	31.169	ENSMZEG00005009488	-	58	32.680	Maylandia_zebra
ENSMUSG00000011837	Snapc2	100	83.133	ENSMAUG00000015015	Snapc2	100	83.133	Mesocricetus_auratus
ENSMUSG00000011837	Snapc2	100	68.000	ENSMICG00000035695	SNAPC2	100	64.917	Microcebus_murinus
ENSMUSG00000011837	Snapc2	100	77.716	ENSMOCG00000019080	Snapc2	100	77.716	Microtus_ochrogaster
ENSMUSG00000011837	Snapc2	95	47.867	ENSMODG00000005069	-	99	46.702	Monodelphis_domestica
ENSMUSG00000011837	Snapc2	100	97.493	MGP_CAROLIEiJ_G0030795	Snapc2	100	97.493	Mus_caroli
ENSMUSG00000011837	Snapc2	100	99.550	MGP_SPRETEiJ_G0031903	Snapc2	100	99.164	Mus_spretus
ENSMUSG00000011837	Snapc2	100	70.400	ENSMPUG00000008010	SNAPC2	91	70.400	Mustela_putorius_furo
ENSMUSG00000011837	Snapc2	95	51.415	ENSMLUG00000002738	-	90	50.676	Myotis_lucifugus
ENSMUSG00000011837	Snapc2	95	51.415	ENSMLUG00000013735	-	89	45.833	Myotis_lucifugus
ENSMUSG00000011837	Snapc2	96	49.533	ENSMLUG00000001710	-	96	49.857	Myotis_lucifugus
ENSMUSG00000011837	Snapc2	95	63.121	ENSMLUG00000013689	-	100	57.182	Myotis_lucifugus
ENSMUSG00000011837	Snapc2	94	50.718	ENSMLUG00000006427	-	89	49.673	Myotis_lucifugus
ENSMUSG00000011837	Snapc2	100	62.613	ENSNGAG00000014201	Snapc2	95	61.967	Nannospalax_galili
ENSMUSG00000011837	Snapc2	86	30.208	ENSNBRG00000003764	-	53	30.208	Neolamprologus_brichardi
ENSMUSG00000011837	Snapc2	95	68.750	ENSNLEG00000001250	SNAPC2	100	61.560	Nomascus_leucogenys
ENSMUSG00000011837	Snapc2	99	51.493	ENSMEUG00000014367	SNAPC2	99	51.493	Notamacropus_eugenii
ENSMUSG00000011837	Snapc2	99	60.484	ENSODEG00000011415	SNAPC2	99	60.000	Octodon_degus
ENSMUSG00000011837	Snapc2	90	32.000	ENSONIG00000002078	-	93	32.028	Oreochromis_niloticus
ENSMUSG00000011837	Snapc2	100	69.369	ENSOCUG00000027536	SNAPC2	77	55.041	Oryctolagus_cuniculus
ENSMUSG00000011837	Snapc2	86	30.568	ENSORLG00020015071	-	55	30.568	Oryzias_latipes_hni
ENSMUSG00000011837	Snapc2	54	33.108	ENSORLG00015016075	-	54	30.568	Oryzias_latipes_hsok
ENSMUSG00000011837	Snapc2	99	30.637	ENSOMEG00000003040	snapc2	97	31.127	Oryzias_melastigma
ENSMUSG00000011837	Snapc2	99	57.263	ENSOGAG00000012870	SNAPC2	99	57.263	Otolemur_garnettii
ENSMUSG00000011837	Snapc2	96	58.216	ENSOARG00000003045	SNAPC2	100	56.393	Ovis_aries
ENSMUSG00000011837	Snapc2	95	58.772	ENSPPAG00000032460	SNAPC2	100	57.576	Pan_paniscus
ENSMUSG00000011837	Snapc2	100	70.400	ENSPPRG00000003265	SNAPC2	100	61.560	Panthera_pardus
ENSMUSG00000011837	Snapc2	94	57.416	ENSPTIG00000016014	SNAPC2	89	51.792	Panthera_tigris_altaica
ENSMUSG00000011837	Snapc2	95	67.857	ENSPTRG00000042034	SNAPC2	100	60.724	Pan_troglodytes
ENSMUSG00000011837	Snapc2	92	71.910	ENSPANG00000025882	SNAPC2	100	61.560	Papio_anubis
ENSMUSG00000011837	Snapc2	86	36.082	ENSPKIG00000000084	snapc2	62	34.564	Paramormyrops_kingsleyae
ENSMUSG00000011837	Snapc2	95	41.204	ENSPSIG00000016099	SNAPC2	99	39.247	Pelodiscus_sinensis
ENSMUSG00000011837	Snapc2	100	79.200	ENSPEMG00000009767	Snapc2	100	78.830	Peromyscus_maniculatus_bairdii
ENSMUSG00000011837	Snapc2	75	46.231	ENSPCIG00000024986	-	79	46.231	Phascolarctos_cinereus
ENSMUSG00000011837	Snapc2	98	30.495	ENSPFOG00000012045	-	97	30.495	Poecilia_formosa
ENSMUSG00000011837	Snapc2	69	36.879	ENSPLAG00000018873	-	98	30.000	Poecilia_latipinna
ENSMUSG00000011837	Snapc2	65	36.879	ENSPMEG00000002270	-	98	30.000	Poecilia_mexicana
ENSMUSG00000011837	Snapc2	65	35.664	ENSPREG00000003140	-	64	35.664	Poecilia_reticulata
ENSMUSG00000011837	Snapc2	95	66.071	ENSPPYG00000009494	SNAPC2	100	61.003	Pongo_abelii
ENSMUSG00000011837	Snapc2	79	78.689	ENSPCAG00000015864	-	59	78.689	Procavia_capensis
ENSMUSG00000011837	Snapc2	100	69.600	ENSPCOG00000026672	SNAPC2	100	62.707	Propithecus_coquereli
ENSMUSG00000011837	Snapc2	69	67.200	ENSPVAG00000002296	SNAPC2	68	61.753	Pteropus_vampyrus
ENSMUSG00000011837	Snapc2	95	33.333	ENSPNAG00000020947	snapc2	64	37.838	Pygocentrus_nattereri
ENSMUSG00000011837	Snapc2	100	84.958	ENSRNOG00000001056	Snapc2	100	84.958	Rattus_norvegicus
ENSMUSG00000011837	Snapc2	95	66.964	ENSRBIG00000044314	SNAPC2	100	60.167	Rhinopithecus_bieti
ENSMUSG00000011837	Snapc2	95	66.964	ENSRROG00000043480	SNAPC2	100	60.167	Rhinopithecus_roxellana
ENSMUSG00000011837	Snapc2	95	69.643	ENSSBOG00000011587	SNAPC2	100	59.889	Saimiri_boliviensis_boliviensis
ENSMUSG00000011837	Snapc2	91	48.344	ENSSHAG00000009002	-	99	48.344	Sarcophilus_harrisii
ENSMUSG00000011837	Snapc2	97	32.370	ENSSMAG00000009095	-	56	34.194	Scophthalmus_maximus
ENSMUSG00000011837	Snapc2	74	31.847	ENSSDUG00000016949	-	55	31.847	Seriola_dumerili
ENSMUSG00000011837	Snapc2	100	52.258	ENSSARG00000012954	SNAPC2	99	45.682	Sorex_araneus
ENSMUSG00000011837	Snapc2	89	42.132	ENSSPUG00000014836	-	60	38.298	Sphenodon_punctatus
ENSMUSG00000011837	Snapc2	100	67.200	ENSSSCG00000013589	SNAPC2	100	60.497	Sus_scrofa
ENSMUSG00000011837	Snapc2	85	35.204	ENSTRUG00000005122	-	62	35.204	Takifugu_rubripes
ENSMUSG00000011837	Snapc2	100	66.400	ENSTTRG00000010165	SNAPC2	100	60.773	Tursiops_truncatus
ENSMUSG00000011837	Snapc2	100	70.400	ENSUAMG00000021489	SNAPC2	100	60.278	Ursus_americanus
ENSMUSG00000011837	Snapc2	95	55.714	ENSUMAG00000014809	SNAPC2	86	53.846	Ursus_maritimus
ENSMUSG00000011837	Snapc2	100	66.400	ENSVVUG00000026998	SNAPC2	100	59.116	Vulpes_vulpes
ENSMUSG00000011837	Snapc2	77	33.582	ENSXMAG00000027683	-	70	30.097	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0016604	nuclear body	21873635.	IBA	Component
GO:0016604	nuclear body	-	ISO	Component