EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000013736 (Gene tree)
Gene ID: 70047
Gene Symbol: Trnt1
Alias: 2410043H24Rik|2610044E04Rik|CGI-47
Full Name: tRNA nucleotidyl transferase%2C CCA-adding%2C 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 13355 bases
Position: chr6:106769120-106782474
Accession: 1917297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000108873	PolyA_pol	PF01743.20	6e-34	1	1
ENSMUSP00000060900	PolyA_pol	PF01743.20	2.4e-33	1	1
ENSMUSP00000108874	PolyA_pol	PF01743.20	2.4e-33	1	1
ENSMUSP00000108875	PolyA_pol	PF01743.20	2.4e-33	1	1
ENSMUSP00000144850	PolyA_pol	PF01743.20	9.3e-17	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000204782	-	476	-	ENSMUSP00000144850	134 (aa)	-	A0A0N4SUW4
ENSMUST00000205163	-	785	-	ENSMUSP00000144943	71 (aa)	-	A0A0N4SV41
ENSMUST00000154026	-	369	-	-	- (aa)	-	-
ENSMUST00000057578	-	2283	XM_006506581	ENSMUSP00000060900	434 (aa)	XP_006506644	Q8K1J6
ENSMUST00000147084	-	357	-	-	- (aa)	-	-
ENSMUST00000113248	-	1398	-	ENSMUSP00000108874	434 (aa)	-	Q8K1J6
ENSMUST00000113249	-	1614	-	ENSMUSP00000108875	434 (aa)	-	Q8K1J6
ENSMUST00000113247	-	1934	-	ENSMUSP00000108873	215 (aa)	-	Q8K1J6

Gene Model

Click here to download ENSMUSG00000013736's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000013736's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000013736	Trnt1	100	92.627	ENSG00000072756	TRNT1	100	92.627	Homo_sapiens
ENSMUSG00000013736	Trnt1	83	81.564	ENSAPOG00000013687	trnt1	95	68.305	Acanthochromis_polyacanthus
ENSMUSG00000013736	Trnt1	100	90.138	ENSAMEG00000014520	TRNT1	100	90.138	Ailuropoda_melanoleuca
ENSMUSG00000013736	Trnt1	91	76.531	ENSACIG00000021706	trnt1	99	67.453	Amphilophus_citrinellus
ENSMUSG00000013736	Trnt1	91	76.020	ENSAOCG00000024612	trnt1	99	66.824	Amphiprion_ocellaris
ENSMUSG00000013736	Trnt1	96	60.192	ENSAPEG00000022627	trnt1	97	60.192	Amphiprion_percula
ENSMUSG00000013736	Trnt1	93	69.975	ENSATEG00000008928	trnt1	99	69.975	Anabas_testudineus
ENSMUSG00000013736	Trnt1	89	75.194	ENSAPLG00000004258	TRNT1	96	75.194	Anas_platyrhynchos
ENSMUSG00000013736	Trnt1	99	74.654	ENSACAG00000005657	TRNT1	99	74.654	Anolis_carolinensis
ENSMUSG00000013736	Trnt1	100	92.166	ENSANAG00000024802	TRNT1	100	92.166	Aotus_nancymaae
ENSMUSG00000013736	Trnt1	91	75.510	ENSACLG00000022227	trnt1	99	66.588	Astatotilapia_calliptera
ENSMUSG00000013736	Trnt1	97	68.884	ENSAMXG00000003960	trnt1	97	68.720	Astyanax_mexicanus
ENSMUSG00000013736	Trnt1	100	91.475	ENSBTAG00000019534	TRNT1	100	91.475	Bos_taurus
ENSMUSG00000013736	Trnt1	81	63.636	WBGene00010089	hpo-31	94	44.181	Caenorhabditis_elegans
ENSMUSG00000013736	Trnt1	100	92.166	ENSCJAG00000015466	TRNT1	100	92.166	Callithrix_jacchus
ENSMUSG00000013736	Trnt1	100	89.631	ENSCAFG00000005985	TRNT1	99	89.631	Canis_familiaris
ENSMUSG00000013736	Trnt1	100	89.631	ENSCAFG00020014746	TRNT1	99	89.631	Canis_lupus_dingo
ENSMUSG00000013736	Trnt1	100	91.475	ENSCHIG00000007030	TRNT1	99	91.475	Capra_hircus
ENSMUSG00000013736	Trnt1	100	92.857	ENSTSYG00000013390	TRNT1	100	92.857	Carlito_syrichta
ENSMUSG00000013736	Trnt1	87	75.132	ENSCAPG00000006891	TRNT1	100	75.132	Cavia_aperea
ENSMUSG00000013736	Trnt1	99	91.375	ENSCPOG00000007849	TRNT1	99	91.375	Cavia_porcellus
ENSMUSG00000013736	Trnt1	95	89.423	ENSCCAG00000002919	TRNT1	100	91.521	Cebus_capucinus
ENSMUSG00000013736	Trnt1	99	93.072	ENSCATG00000031985	TRNT1	99	93.072	Cercocebus_atys
ENSMUSG00000013736	Trnt1	99	92.541	ENSCLAG00000005186	TRNT1	99	92.541	Chinchilla_lanigera
ENSMUSG00000013736	Trnt1	100	93.548	ENSCSAG00000011052	TRNT1	100	93.548	Chlorocebus_sabaeus
ENSMUSG00000013736	Trnt1	100	87.313	ENSCHOG00000005712	TRNT1	85	90.964	Choloepus_hoffmanni
ENSMUSG00000013736	Trnt1	94	80.976	ENSCPBG00000017636	TRNT1	94	80.976	Chrysemys_picta_bellii
ENSMUSG00000013736	Trnt1	81	62.644	ENSCING00000007069	-	99	44.526	Ciona_intestinalis
ENSMUSG00000013736	Trnt1	89	58.854	ENSCSAVG00000007494	-	99	44.575	Ciona_savignyi
ENSMUSG00000013736	Trnt1	100	93.088	ENSCANG00000039030	TRNT1	100	93.088	Colobus_angolensis_palliatus
ENSMUSG00000013736	Trnt1	100	96.774	ENSCGRG00001009998	Trnt1	100	96.774	Cricetulus_griseus_chok1gshd
ENSMUSG00000013736	Trnt1	100	96.774	ENSCGRG00000013410	Trnt1	100	96.774	Cricetulus_griseus_crigri
ENSMUSG00000013736	Trnt1	83	80.447	ENSCSEG00000008157	trnt1	96	68.382	Cynoglossus_semilaevis
ENSMUSG00000013736	Trnt1	83	80.447	ENSCVAG00000019770	trnt1	96	69.118	Cyprinodon_variegatus
ENSMUSG00000013736	Trnt1	91	74.874	ENSDARG00000075297	trnt1	99	67.442	Danio_rerio
ENSMUSG00000013736	Trnt1	100	90.092	ENSDNOG00000008837	TRNT1	100	90.092	Dasypus_novemcinctus
ENSMUSG00000013736	Trnt1	100	90.092	ENSDORG00000014035	Trnt1	100	90.092	Dipodomys_ordii
ENSMUSG00000013736	Trnt1	80	67.816	FBgn0037369	CG2100	83	48.762	Drosophila_melanogaster
ENSMUSG00000013736	Trnt1	86	91.892	ENSETEG00000018177	TRNT1	100	88.353	Echinops_telfairi
ENSMUSG00000013736	Trnt1	85	70.109	ENSEBUG00000012779	-	95	62.035	Eptatretus_burgeri
ENSMUSG00000013736	Trnt1	100	91.244	ENSEASG00005003577	TRNT1	100	91.244	Equus_asinus_asinus
ENSMUSG00000013736	Trnt1	100	91.475	ENSECAG00000014420	TRNT1	100	91.475	Equus_caballus
ENSMUSG00000013736	Trnt1	99	88.837	ENSEEUG00000009567	TRNT1	99	88.837	Erinaceus_europaeus
ENSMUSG00000013736	Trnt1	99	67.517	ENSELUG00000003802	trnt1	99	67.517	Esox_lucius
ENSMUSG00000013736	Trnt1	100	89.862	ENSFCAG00000026805	TRNT1	99	89.862	Felis_catus
ENSMUSG00000013736	Trnt1	89	74.805	ENSFALG00000013539	TRNT1	100	74.805	Ficedula_albicollis
ENSMUSG00000013736	Trnt1	99	93.240	ENSFDAG00000018412	TRNT1	99	93.240	Fukomys_damarensis
ENSMUSG00000013736	Trnt1	87	77.835	ENSFHEG00000019294	trnt1	99	67.376	Fundulus_heteroclitus
ENSMUSG00000013736	Trnt1	83	79.330	ENSGMOG00000007460	trnt1	96	67.322	Gadus_morhua
ENSMUSG00000013736	Trnt1	96	73.012	ENSGALG00000017368	TRNT1	96	73.012	Gallus_gallus
ENSMUSG00000013736	Trnt1	83	80.447	ENSGAFG00000008647	trnt1	96	68.627	Gambusia_affinis
ENSMUSG00000013736	Trnt1	83	80.447	ENSGACG00000011903	trnt1	96	68.063	Gasterosteus_aculeatus
ENSMUSG00000013736	Trnt1	96	80.288	ENSGAGG00000020942	TRNT1	95	80.288	Gopherus_agassizii
ENSMUSG00000013736	Trnt1	100	92.857	ENSGGOG00000015286	TRNT1	100	92.857	Gorilla_gorilla
ENSMUSG00000013736	Trnt1	91	75.510	ENSHBUG00000002797	trnt1	99	66.588	Haplochromis_burtoni
ENSMUSG00000013736	Trnt1	99	87.209	ENSHGLG00000000221	-	99	87.209	Heterocephalus_glaber_female
ENSMUSG00000013736	Trnt1	99	92.774	ENSHGLG00000003649	TRNT1	99	92.774	Heterocephalus_glaber_female
ENSMUSG00000013736	Trnt1	99	91.608	ENSHGLG00100016421	TRNT1	99	91.608	Heterocephalus_glaber_male
ENSMUSG00000013736	Trnt1	83	81.564	ENSHCOG00000010618	trnt1	96	67.647	Hippocampus_comes
ENSMUSG00000013736	Trnt1	93	73.367	ENSIPUG00000000971	trnt1	99	66.512	Ictalurus_punctatus
ENSMUSG00000013736	Trnt1	99	90.465	ENSSTOG00000000150	TRNT1	99	92.647	Ictidomys_tridecemlineatus
ENSMUSG00000013736	Trnt1	99	93.721	ENSJJAG00000018561	Trnt1	99	93.721	Jaculus_jaculus
ENSMUSG00000013736	Trnt1	87	76.923	ENSKMAG00000011307	trnt1	99	67.217	Kryptolebias_marmoratus
ENSMUSG00000013736	Trnt1	91	74.490	ENSLBEG00000019457	trnt1	96	63.300	Labrus_bergylta
ENSMUSG00000013736	Trnt1	96	73.735	ENSLACG00000013227	TRNT1	96	73.735	Latimeria_chalumnae
ENSMUSG00000013736	Trnt1	96	71.053	ENSLOCG00000011105	trnt1	94	71.053	Lepisosteus_oculatus
ENSMUSG00000013736	Trnt1	100	92.396	ENSLAFG00000023191	TRNT1	100	92.396	Loxodonta_africana
ENSMUSG00000013736	Trnt1	99	93.303	ENSMFAG00000045113	TRNT1	99	93.303	Macaca_fascicularis
ENSMUSG00000013736	Trnt1	99	93.303	ENSMMUG00000017983	TRNT1	99	93.303	Macaca_mulatta
ENSMUSG00000013736	Trnt1	99	93.303	ENSMNEG00000037805	TRNT1	99	93.303	Macaca_nemestrina
ENSMUSG00000013736	Trnt1	88	95.026	ENSMLEG00000033671	TRNT1	99	95.026	Mandrillus_leucophaeus
ENSMUSG00000013736	Trnt1	91	77.551	ENSMAMG00000023401	trnt1	99	68.000	Mastacembelus_armatus
ENSMUSG00000013736	Trnt1	91	75.510	ENSMZEG00005009141	trnt1	99	66.588	Maylandia_zebra
ENSMUSG00000013736	Trnt1	74	74.455	ENSMGAG00000009971	TRNT1	100	74.455	Meleagris_gallopavo
ENSMUSG00000013736	Trnt1	100	96.544	ENSMAUG00000020707	Trnt1	100	96.544	Mesocricetus_auratus
ENSMUSG00000013736	Trnt1	99	93.256	ENSMICG00000016615	TRNT1	99	93.256	Microcebus_murinus
ENSMUSG00000013736	Trnt1	100	95.622	ENSMOCG00000004539	Trnt1	100	95.622	Microtus_ochrogaster
ENSMUSG00000013736	Trnt1	86	79.348	ENSMMOG00000010742	trnt1	97	67.797	Mola_mola
ENSMUSG00000013736	Trnt1	99	83.953	ENSMODG00000004368	TRNT1	99	83.953	Monodelphis_domestica
ENSMUSG00000013736	Trnt1	91	75.000	ENSMALG00000008376	trnt1	99	65.647	Monopterus_albus
ENSMUSG00000013736	Trnt1	100	100.000	MGP_CAROLIEiJ_G0028698	Trnt1	100	100.000	Mus_caroli
ENSMUSG00000013736	Trnt1	100	98.157	MGP_PahariEiJ_G0022449	Trnt1	100	98.522	Mus_pahari
ENSMUSG00000013736	Trnt1	100	100.000	MGP_SPRETEiJ_G0029726	Trnt1	100	100.000	Mus_spretus
ENSMUSG00000013736	Trnt1	100	91.014	ENSMPUG00000017017	TRNT1	99	91.014	Mustela_putorius_furo
ENSMUSG00000013736	Trnt1	89	88.083	ENSMLUG00000011864	TRNT1	100	88.083	Myotis_lucifugus
ENSMUSG00000013736	Trnt1	99	94.419	ENSNGAG00000000537	Trnt1	99	94.419	Nannospalax_galili
ENSMUSG00000013736	Trnt1	91	75.510	ENSNBRG00000023606	trnt1	99	66.377	Neolamprologus_brichardi
ENSMUSG00000013736	Trnt1	100	93.318	ENSNLEG00000003226	TRNT1	100	93.318	Nomascus_leucogenys
ENSMUSG00000013736	Trnt1	99	83.256	ENSMEUG00000004684	TRNT1	99	83.256	Notamacropus_eugenii
ENSMUSG00000013736	Trnt1	88	80.157	ENSOPRG00000015067	TRNT1	99	80.157	Ochotona_princeps
ENSMUSG00000013736	Trnt1	99	91.455	ENSODEG00000007597	TRNT1	99	91.455	Octodon_degus
ENSMUSG00000013736	Trnt1	91	75.510	ENSONIG00000020273	trnt1	98	66.824	Oreochromis_niloticus
ENSMUSG00000013736	Trnt1	99	73.832	ENSOANG00000007514	TRNT1	99	73.832	Ornithorhynchus_anatinus
ENSMUSG00000013736	Trnt1	100	85.484	ENSOCUG00000008580	TRNT1	99	85.484	Oryctolagus_cuniculus
ENSMUSG00000013736	Trnt1	88	77.368	ENSORLG00000003165	trnt1	99	65.871	Oryzias_latipes
ENSMUSG00000013736	Trnt1	88	77.368	ENSORLG00020022060	trnt1	99	66.348	Oryzias_latipes_hni
ENSMUSG00000013736	Trnt1	87	74.359	ENSORLG00015018915	trnt1	99	64.623	Oryzias_latipes_hsok
ENSMUSG00000013736	Trnt1	91	77.041	ENSOMEG00000003331	trnt1	99	64.235	Oryzias_melastigma
ENSMUSG00000013736	Trnt1	100	91.244	ENSOARG00000008631	TRNT1	99	91.244	Ovis_aries
ENSMUSG00000013736	Trnt1	100	92.857	ENSPPAG00000043566	TRNT1	100	92.857	Pan_paniscus
ENSMUSG00000013736	Trnt1	99	90.531	ENSPPRG00000001327	TRNT1	99	90.531	Panthera_pardus
ENSMUSG00000013736	Trnt1	100	90.323	ENSPTIG00000011448	TRNT1	99	90.323	Panthera_tigris_altaica
ENSMUSG00000013736	Trnt1	100	92.857	ENSPTRG00000014564	TRNT1	100	92.857	Pan_troglodytes
ENSMUSG00000013736	Trnt1	99	93.072	ENSPANG00000025944	TRNT1	99	93.072	Papio_anubis
ENSMUSG00000013736	Trnt1	98	68.837	ENSPKIG00000020015	trnt1	99	68.837	Paramormyrops_kingsleyae
ENSMUSG00000013736	Trnt1	91	80.101	ENSPSIG00000017356	TRNT1	99	81.667	Pelodiscus_sinensis
ENSMUSG00000013736	Trnt1	91	74.490	ENSPMGG00000008888	trnt1	98	66.118	Periophthalmus_magnuspinnatus
ENSMUSG00000013736	Trnt1	100	98.157	ENSPEMG00000019845	Trnt1	100	98.157	Peromyscus_maniculatus_bairdii
ENSMUSG00000013736	Trnt1	100	83.641	ENSPCIG00000030436	TRNT1	100	83.641	Phascolarctos_cinereus
ENSMUSG00000013736	Trnt1	83	80.447	ENSPFOG00000006194	trnt1	96	68.627	Poecilia_formosa
ENSMUSG00000013736	Trnt1	83	80.447	ENSPLAG00000015623	trnt1	99	68.486	Poecilia_latipinna
ENSMUSG00000013736	Trnt1	83	80.447	ENSPMEG00000012216	trnt1	99	68.486	Poecilia_mexicana
ENSMUSG00000013736	Trnt1	84	79.006	ENSPREG00000021470	trnt1	96	68.537	Poecilia_reticulata
ENSMUSG00000013736	Trnt1	100	93.548	ENSPPYG00000013702	TRNT1	100	93.548	Pongo_abelii
ENSMUSG00000013736	Trnt1	88	91.384	ENSPCAG00000001951	TRNT1	100	91.384	Procavia_capensis
ENSMUSG00000013736	Trnt1	100	92.627	ENSPCOG00000022228	TRNT1	100	92.627	Propithecus_coquereli
ENSMUSG00000013736	Trnt1	88	91.146	ENSPVAG00000008784	TRNT1	100	91.146	Pteropus_vampyrus
ENSMUSG00000013736	Trnt1	91	75.510	ENSPNYG00000003120	trnt1	99	66.588	Pundamilia_nyererei
ENSMUSG00000013736	Trnt1	89	75.916	ENSPNAG00000000565	trnt1	97	67.773	Pygocentrus_nattereri
ENSMUSG00000013736	Trnt1	100	97.235	ENSRNOG00000006432	Trnt1	100	97.235	Rattus_norvegicus
ENSMUSG00000013736	Trnt1	100	91.045	ENSRBIG00000042632	TRNT1	100	90.553	Rhinopithecus_bieti
ENSMUSG00000013736	Trnt1	100	92.857	ENSRROG00000036866	TRNT1	100	92.857	Rhinopithecus_roxellana
ENSMUSG00000013736	Trnt1	100	92.627	ENSSBOG00000021208	TRNT1	100	92.627	Saimiri_boliviensis_boliviensis
ENSMUSG00000013736	Trnt1	99	83.488	ENSSHAG00000018861	TRNT1	99	83.488	Sarcophilus_harrisii
ENSMUSG00000013736	Trnt1	94	71.007	ENSSFOG00015020844	trnt1	94	71.007	Scleropages_formosus
ENSMUSG00000013736	Trnt1	91	76.020	ENSSMAG00000015432	trnt1	97	66.588	Scophthalmus_maximus
ENSMUSG00000013736	Trnt1	91	75.510	ENSSDUG00000012320	trnt1	99	65.882	Seriola_dumerili
ENSMUSG00000013736	Trnt1	56	63.071	ENSSLDG00000016463	-	91	63.180	Seriola_lalandi_dorsalis
ENSMUSG00000013736	Trnt1	91	75.510	ENSSLDG00000009325	trnt1	99	65.882	Seriola_lalandi_dorsalis
ENSMUSG00000013736	Trnt1	88	80.208	ENSSPUG00000014153	TRNT1	100	80.208	Sphenodon_punctatus
ENSMUSG00000013736	Trnt1	91	75.510	ENSSPAG00000021005	trnt1	99	66.118	Stegastes_partitus
ENSMUSG00000013736	Trnt1	100	91.244	ENSSSCG00000011529	TRNT1	100	91.244	Sus_scrofa
ENSMUSG00000013736	Trnt1	93	74.321	ENSTGUG00000010192	TRNT1	99	74.321	Taeniopygia_guttata
ENSMUSG00000013736	Trnt1	83	81.564	ENSTRUG00000001088	trnt1	96	69.363	Takifugu_rubripes
ENSMUSG00000013736	Trnt1	83	81.564	ENSTNIG00000007363	trnt1	94	69.363	Tetraodon_nigroviridis
ENSMUSG00000013736	Trnt1	100	86.567	ENSTBEG00000006367	TRNT1	100	72.973	Tupaia_belangeri
ENSMUSG00000013736	Trnt1	100	91.705	ENSTTRG00000007803	TRNT1	100	91.705	Tursiops_truncatus
ENSMUSG00000013736	Trnt1	100	90.092	ENSUAMG00000022574	TRNT1	99	90.092	Ursus_americanus
ENSMUSG00000013736	Trnt1	100	90.323	ENSUMAG00000024092	TRNT1	99	90.323	Ursus_maritimus
ENSMUSG00000013736	Trnt1	100	89.862	ENSVVUG00000012810	TRNT1	99	89.862	Vulpes_vulpes
ENSMUSG00000013736	Trnt1	98	64.802	ENSXETG00000025091	trnt1	99	66.915	Xenopus_tropicalis
ENSMUSG00000013736	Trnt1	83	80.447	ENSXCOG00000010150	trnt1	96	68.382	Xiphophorus_couchianus
ENSMUSG00000013736	Trnt1	83	79.888	ENSXMAG00000002227	trnt1	96	67.892	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	ISO	Function
GO:0000166	nucleotide binding	-	IEA	Function
GO:0001680	tRNA 3'-terminal CCA addition	-	ISO	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	11504732.	ISA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006396	RNA processing	-	IEA	Process
GO:0008033	tRNA processing	11504732.	ISO	Process
GO:0009022	tRNA nucleotidyltransferase activity	11504732.	ISO	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0016779	nucleotidyltransferase activity	-	IEA	Function
GO:0052927	CTP:tRNA cytidylyltransferase activity	-	IEA	Function
GO:0052928	CTP:3'-cytidine-tRNA cytidylyltransferase activity	-	IEA	Function
GO:0052929	ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity	-	ISO	Function
GO:1990180	mitochondrial tRNA 3'-end processing	-	ISO	Process