EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000016181 (Gene tree)
Gene ID: 215193
Gene Symbol: Diexf
Alias: AA408296
Full Name: digestive organ expansion factor homolog (zebrafish)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 39169
Position: chr1: 193091104-193130272
Accession: 2138080
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000194412	-	336	-	ENSMUSP00000142099	93 (aa)	-	A0A0A6YXR2
ENSMUST00000194335	-	487	-	-	- (aa)	-	-
ENSMUST00000195291	-	5504	-	ENSMUSP00000141676	640 (aa)	-	A0A0A6YWS6
ENSMUST00000194124	-	290	-	-	- (aa)	-	-
ENSMUST00000195848	-	428	-	ENSMUSP00000141950	52 (aa)	-	A0A0A6YXE1
ENSMUST00000191928	-	709	-	-	- (aa)	-	-
ENSMUST00000193460	-	731	-	ENSMUSP00000142059	225 (aa)	-	A0A0A6YXM9
ENSMUST00000085555	-	5570	XM_006497250	ENSMUSP00000082691	768 (aa)	XP_006497313	A0A0R4J114
ENSMUST00000193070	-	687	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000016181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000016181's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000016181	Diexf	100	86.736	ENSG00000117597	UTP25	100	86.606	Homo_sapiens
ENSMUSG00000016181	Diexf	89	34.597	YIL091C		80	34.114	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0007275	multicellular organism development	-	IEA	Process
GO:0019843	rRNA binding	21873635.	IBA	Function
GO:0030163	protein catabolic process	-	ISO	Process
GO:0031648	protein destabilization	-	ISO	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0034511	U3 snoRNA binding	21873635.	IBA	Function
GO:0040019	positive regulation of embryonic development	29262616.	IMP	Process