EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000016833 (Gene tree)
Gene ID
68735
Gene Symbol
Mrps18c
Alias
1110037D14Rik
Full Name
mitochondrial ribosomal protein S18C
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
5845 bases
Position
chr5:100798627-100804471
Accession
1915985
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000016977Ribosomal_S18PF01084.204.4e-2311
ENSMUSP00000108522Ribosomal_S18PF01084.201.2e-2111
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000143477-258--- (aa)--
ENSMUST00000016977-638-ENSMUSP00000016977143 (aa)-Q8R2L5
ENSMUST00000112898-460-ENSMUSP0000010851988 (aa)-D3Z3D3
ENSMUST00000140296-256--- (aa)--
ENSMUST00000198453-457-ENSMUSP0000014316642 (aa)-A0A0G2JFG7
ENSMUST00000112901-820-ENSMUSP00000108522128 (aa)-Q8BTZ9
Gene Model
Click here to download ENSMUSG00000016833's gene model file
Pathways
Pathway IDPathway NameSource
mmu03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000016833's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000016833Mrps18c9331.343ENSMUSG00000023967Mrps18a8731.618
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000016833Mrps18c10078.082ENSG00000163319MRPS18C10078.082Homo_sapiens
ENSMUSG00000016833Mrps18c10073.288ENSAMEG00000004915MRPS18C10073.288Ailuropoda_melanoleuca
ENSMUSG00000016833Mrps18c10065.753ENSANAG00000028055-10065.753Aotus_nancymaae
ENSMUSG00000016833Mrps18c9964.474ENSANAG00000025323-9564.474Aotus_nancymaae
ENSMUSG00000016833Mrps18c10078.767ENSBTAG00000018155MRPS18C10078.767Bos_taurus
ENSMUSG00000016833Mrps18c10052.740ENSBTAG00000049836-10052.740Bos_taurus
ENSMUSG00000016833Mrps18c10076.712ENSCJAG00000042247MRPS18C9776.712Callithrix_jacchus
ENSMUSG00000016833Mrps18c10079.452ENSCAFG00020010491MRPS18C10079.452Canis_lupus_dingo
ENSMUSG00000016833Mrps18c10047.945ENSCHIG00000016551-10047.945Capra_hircus
ENSMUSG00000016833Mrps18c9961.644ENSCHIG00000018805-9961.644Capra_hircus
ENSMUSG00000016833Mrps18c8883.333ENSCHIG00000004461-8683.333Capra_hircus
ENSMUSG00000016833Mrps18c8467.290ENSCHIG00000019359-9867.290Capra_hircus
ENSMUSG00000016833Mrps18c10067.808ENSCHIG00000022740-10067.808Capra_hircus
ENSMUSG00000016833Mrps18c10077.397ENSTSYG00000012924MRPS18C10077.397Carlito_syrichta
ENSMUSG00000016833Mrps18c10074.658ENSCPOG00000009198MRPS18C10074.658Cavia_porcellus
ENSMUSG00000016833Mrps18c10074.658ENSCCAG00000019347-10074.658Cebus_capucinus
ENSMUSG00000016833Mrps18c10068.531ENSCCAG00000028283-10068.531Cebus_capucinus
ENSMUSG00000016833Mrps18c10076.712ENSCCAG00000026577-10076.712Cebus_capucinus
ENSMUSG00000016833Mrps18c9965.517ENSCCAG00000025155-9565.517Cebus_capucinus
ENSMUSG00000016833Mrps18c10078.082ENSCATG00000040697MRPS18C10078.082Cercocebus_atys
ENSMUSG00000016833Mrps18c10078.767ENSCLAG00000008205-10078.767Chinchilla_lanigera
ENSMUSG00000016833Mrps18c10077.397ENSCLAG00000017397-10077.397Chinchilla_lanigera
ENSMUSG00000016833Mrps18c10078.082ENSCANG00000038907MRPS18C10078.082Colobus_angolensis_palliatus
ENSMUSG00000016833Mrps18c9956.944ENSCANG00000037347-10054.545Colobus_angolensis_palliatus
ENSMUSG00000016833Mrps18c10067.123ENSCANG00000041165-10067.123Colobus_angolensis_palliatus
ENSMUSG00000016833Mrps18c10082.517ENSCGRG00001000103Mrps18c10082.517Cricetulus_griseus_chok1gshd
ENSMUSG00000016833Mrps18c10082.517ENSCGRG00000002192Mrps18c10082.517Cricetulus_griseus_crigri
ENSMUSG00000016833Mrps18c9976.389ENSDORG00000012749Mrps18c10076.389Dipodomys_ordii
ENSMUSG00000016833Mrps18c10052.740ENSETEG00000012223-10052.740Echinops_telfairi
ENSMUSG00000016833Mrps18c10080.690ENSEASG00005013234MRPS18C10080.690Equus_asinus_asinus
ENSMUSG00000016833Mrps18c10081.379ENSECAG00000020387MRPS18C10081.379Equus_caballus
ENSMUSG00000016833Mrps18c10057.143ENSEEUG00000003504MRPS18C9957.143Erinaceus_europaeus
ENSMUSG00000016833Mrps18c10078.767ENSFCAG00000042464MRPS18C10078.767Felis_catus
ENSMUSG00000016833Mrps18c10077.397ENSFDAG00000000250-10077.397Fukomys_damarensis
ENSMUSG00000016833Mrps18c10065.068ENSFDAG00000008778-10065.068Fukomys_damarensis
ENSMUSG00000016833Mrps18c10057.534ENSGGOG00000040785-10057.534Gorilla_gorilla
ENSMUSG00000016833Mrps18c10065.068ENSGGOG00000008603MRPS18C10065.068Gorilla_gorilla
ENSMUSG00000016833Mrps18c10052.055ENSGGOG00000037903-10052.055Gorilla_gorilla
ENSMUSG00000016833Mrps18c10071.918ENSHGLG00000020134-10071.918Heterocephalus_glaber_female
ENSMUSG00000016833Mrps18c10070.629ENSHGLG00000012671-9870.629Heterocephalus_glaber_female
ENSMUSG00000016833Mrps18c10078.767ENSHGLG00000002953-10078.767Heterocephalus_glaber_female
ENSMUSG00000016833Mrps18c10071.918ENSHGLG00100019678-10071.918Heterocephalus_glaber_male
ENSMUSG00000016833Mrps18c10078.767ENSHGLG00100016235-10078.767Heterocephalus_glaber_male
ENSMUSG00000016833Mrps18c10070.629ENSHGLG00100015568-9870.629Heterocephalus_glaber_male
ENSMUSG00000016833Mrps18c10077.931ENSSTOG00000007989MRPS18C10077.931Ictidomys_tridecemlineatus
ENSMUSG00000016833Mrps18c5086.111ENSJJAG00000022437Mrps18c7486.111Jaculus_jaculus
ENSMUSG00000016833Mrps18c10074.658ENSLAFG00000001059MRPS18C10074.658Loxodonta_africana
ENSMUSG00000016833Mrps18c10062.329ENSMFAG00000041276-10062.329Macaca_fascicularis
ENSMUSG00000016833Mrps18c10078.767ENSMFAG00000003991MRPS18C10078.767Macaca_fascicularis
ENSMUSG00000016833Mrps18c10067.808ENSMMUG00000039146-10067.808Macaca_mulatta
ENSMUSG00000016833Mrps18c10062.329ENSMMUG00000015353MRPS18C10062.329Macaca_mulatta
ENSMUSG00000016833Mrps18c10068.493ENSMMUG00000048717-10068.493Macaca_mulatta
ENSMUSG00000016833Mrps18c10059.589ENSMNEG00000018700-10059.589Macaca_nemestrina
ENSMUSG00000016833Mrps18c10078.767ENSMNEG00000043663MRPS18C10078.767Macaca_nemestrina
ENSMUSG00000016833Mrps18c10078.082ENSMLEG00000038884MRPS18C10078.082Mandrillus_leucophaeus
ENSMUSG00000016833Mrps18c10060.959ENSMICG00000037615-10060.959Microcebus_murinus
ENSMUSG00000016833Mrps18c10078.767ENSMICG00000032609-10078.767Microcebus_murinus
ENSMUSG00000016833Mrps18c10083.916ENSMOCG00000015591-10083.916Microtus_ochrogaster
ENSMUSG00000016833Mrps18c10081.818ENSMOCG00000009898-10081.818Microtus_ochrogaster
ENSMUSG00000016833Mrps18c9770.629ENSMODG00000020773MRPS18C9970.629Monodelphis_domestica
ENSMUSG00000016833Mrps18c10095.105MGP_CAROLIEiJ_G0027458Mrps18c10095.105Mus_caroli
ENSMUSG00000016833Mrps18c10096.503MGP_PahariEiJ_G0017236Mrps18c10096.503Mus_pahari
ENSMUSG00000016833Mrps18c10096.875MGP_SPRETEiJ_G0028455Mrps18c10096.875Mus_spretus
ENSMUSG00000016833Mrps18c10078.767ENSMLUG00000017057MRPS18C10078.767Myotis_lucifugus
ENSMUSG00000016833Mrps18c9182.308ENSNGAG00000015980Mrps18c10080.420Nannospalax_galili
ENSMUSG00000016833Mrps18c10071.233ENSNLEG00000018188-10071.233Nomascus_leucogenys
ENSMUSG00000016833Mrps18c10077.397ENSNLEG00000009119MRPS18C10077.397Nomascus_leucogenys
ENSMUSG00000016833Mrps18c7773.000ENSOPRG00000004113MRPS18C6873.000Ochotona_princeps
ENSMUSG00000016833Mrps18c10075.342ENSODEG00000007599-10075.342Octodon_degus
ENSMUSG00000016833Mrps18c10076.027ENSODEG00000020349-10076.027Octodon_degus
ENSMUSG00000016833Mrps18c10076.027ENSOARG00000002770MRPS18C10076.027Ovis_aries
ENSMUSG00000016833Mrps18c10053.425ENSPPAG00000037400-10053.425Pan_paniscus
ENSMUSG00000016833Mrps18c10078.082ENSPPAG00000037122MRPS18C10078.082Pan_paniscus
ENSMUSG00000016833Mrps18c10078.082ENSPPRG00000011089MRPS18C10078.082Panthera_pardus
ENSMUSG00000016833Mrps18c10077.397ENSPTIG00000021242MRPS18C10077.397Panthera_tigris_altaica
ENSMUSG00000016833Mrps18c10051.370ENSPTRG00000047058-10051.370Pan_troglodytes
ENSMUSG00000016833Mrps18c10078.082ENSPTRG00000016233MRPS18C10078.082Pan_troglodytes
ENSMUSG00000016833Mrps18c10077.397ENSPANG00000033931MRPS18C10077.397Papio_anubis
ENSMUSG00000016833Mrps18c10067.808ENSPANG00000034202-10067.808Papio_anubis
ENSMUSG00000016833Mrps18c10081.119ENSPEMG00000008390Mrps18c10081.119Peromyscus_maniculatus_bairdii
ENSMUSG00000016833Mrps18c7185.294ENSPCIG00000019737-10085.294Phascolarctos_cinereus
ENSMUSG00000016833Mrps18c9858.503ENSPCIG00000000097-9958.503Phascolarctos_cinereus
ENSMUSG00000016833Mrps18c9968.310ENSPCIG00000005376-10068.310Phascolarctos_cinereus
ENSMUSG00000016833Mrps18c9974.306ENSPPYG00000025835-9974.306Pongo_abelii
ENSMUSG00000016833Mrps18c10078.767ENSPPYG00000025867MRPS18C10078.767Pongo_abelii
ENSMUSG00000016833Mrps18c10076.712ENSPCAG00000004975MRPS18C10076.712Procavia_capensis
ENSMUSG00000016833Mrps18c10080.822ENSPCOG00000017634MRPS18C10080.822Propithecus_coquereli
ENSMUSG00000016833Mrps18c7775.248ENSPVAG00000006439MRPS18C10075.248Pteropus_vampyrus
ENSMUSG00000016833Mrps18c10090.909ENSRNOG00000002178Mrps18c10090.909Rattus_norvegicus
ENSMUSG00000016833Mrps18c10071.918ENSRBIG00000035023-10071.918Rhinopithecus_bieti
ENSMUSG00000016833Mrps18c10078.082ENSRBIG00000041685MRPS18C10078.082Rhinopithecus_bieti
ENSMUSG00000016833Mrps18c10053.425ENSRBIG00000031637-10053.425Rhinopithecus_bieti
ENSMUSG00000016833Mrps18c10053.425ENSRROG00000030722-10053.425Rhinopithecus_roxellana
ENSMUSG00000016833Mrps18c10071.918ENSRROG00000033834-10071.918Rhinopithecus_roxellana
ENSMUSG00000016833Mrps18c10078.082ENSRROG00000044334MRPS18C10078.082Rhinopithecus_roxellana
ENSMUSG00000016833Mrps18c9961.268ENSSBOG00000032292-10061.268Saimiri_boliviensis_boliviensis
ENSMUSG00000016833Mrps18c10060.959ENSSBOG00000029234-10060.959Saimiri_boliviensis_boliviensis
ENSMUSG00000016833Mrps18c10077.397ENSSBOG00000027568-10077.397Saimiri_boliviensis_boliviensis
ENSMUSG00000016833Mrps18c9969.655ENSSBOG00000022205-9269.655Saimiri_boliviensis_boliviensis
ENSMUSG00000016833Mrps18c8184.483ENSSHAG00000007084MRPS18C8084.483Sarcophilus_harrisii
ENSMUSG00000016833Mrps18c10078.767ENSSSCG00000038042MRPS18C10078.767Sus_scrofa
ENSMUSG00000016833Mrps18c10078.767ENSTBEG00000012505MRPS18C10078.767Tupaia_belangeri
ENSMUSG00000016833Mrps18c10082.192ENSTTRG00000004897MRPS18C10082.192Tursiops_truncatus
ENSMUSG00000016833Mrps18c10080.822ENSUAMG00000012878MRPS18C10080.822Ursus_americanus
ENSMUSG00000016833Mrps18c10080.822ENSUMAG00000008829MRPS18C10080.822Ursus_maritimus
ENSMUSG00000016833Mrps18c10082.192ENSVPAG00000011358MRPS18C10082.192Vicugna_pacos
ENSMUSG00000016833Mrps18c10078.767ENSVVUG00000015672MRPS18C10078.767Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0005739mitochondrion18614015.HDAComponent
GO:0005763mitochondrial small ribosomal subunit21873635.IBAComponent
GO:0005763mitochondrial small ribosomal subunit-ISOComponent
GO:0005840ribosome-IEAComponent
GO:0006412translation-IEAProcess
GO:0070181small ribosomal subunit rRNA binding21873635.IBAFunction

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