EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000017264 (Gene tree)
Gene ID
50912
Gene Symbol
Exosc10
Alias
PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4
Full Name
exosome component 10
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
23973 bases
Position
chr4:148558429-148582401
Accession
1355322
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000075401HRDCPF00570.239.5e-1411
ENSMUSP00000017408HRDCPF00570.231e-1311
ENSMUSP00000075401PMC2NTPF08066.122.8e-2211
ENSMUSP00000017408PMC2NTPF08066.122.9e-2211
ENSMUSP00000075401DNA_pol_A_exo1PF01612.203.9e-4811
ENSMUSP00000017408DNA_pol_A_exo1PF01612.204e-4811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000173892-401--- (aa)--
ENSMUST00000173154-2773--- (aa)--
ENSMUST00000097781-2816-ENSMUSP00000095388618 (aa)-F6VYQ6
ENSMUST00000173767-1188--- (aa)--
ENSMUST00000150723-306-ENSMUSP0000013333631 (aa)-G3UWL4
ENSMUST00000126897-1195--- (aa)--
ENSMUST00000076022-2682-ENSMUSP00000075401862 (aa)-Q8K366
ENSMUST00000017408-2790XM_006539023ENSMUSP00000017408887 (aa)XP_006539086P56960
Gene Model
Click here to download ENSMUSG00000017264's gene model file
Pathways
Pathway IDPathway NameSource
mmu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000017264's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000017264Exosc109792.833ENSG00000171824EXOSC1010091.935Homo_sapiens
ENSMUSG00000017264Exosc109470.740ENSAPOG00000013304exosc109762.329Acanthochromis_polyacanthus
ENSMUSG00000017264Exosc109793.000ENSAMEG00000009546EXOSC1010085.811Ailuropoda_melanoleuca
ENSMUSG00000017264Exosc109368.522ENSACIG00000020455exosc109659.150Amphilophus_citrinellus
ENSMUSG00000017264Exosc109568.447ENSAOCG00000018823exosc109761.111Amphiprion_ocellaris
ENSMUSG00000017264Exosc109470.172ENSAPEG00000017786exosc109661.872Amphiprion_percula
ENSMUSG00000017264Exosc109470.517ENSATEG00000017271exosc109762.215Anabas_testudineus
ENSMUSG00000017264Exosc109479.793ENSAPLG00000006652EXOSC1010071.183Anas_platyrhynchos
ENSMUSG00000017264Exosc105479.341ENSACAG00000002545-10079.341Anolis_carolinensis
ENSMUSG00000017264Exosc109785.333ENSANAG00000031112EXOSC1010081.285Aotus_nancymaae
ENSMUSG00000017264Exosc109867.162ENSACLG00000025226exosc109958.969Astatotilapia_calliptera
ENSMUSG00000017264Exosc109667.169ENSAMXG00000014510exosc1010057.424Astyanax_mexicanus
ENSMUSG00000017264Exosc109793.000ENSBTAG00000002590EXOSC109989.209Bos_taurus
ENSMUSG00000017264Exosc108936.332WBGene00000796crn-37733.621Caenorhabditis_elegans
ENSMUSG00000017264Exosc109792.333ENSCJAG00000002327EXOSC1010086.079Callithrix_jacchus
ENSMUSG00000017264Exosc109793.500ENSCAFG00000016721EXOSC109887.613Canis_familiaris
ENSMUSG00000017264Exosc109793.500ENSCAFG00020002481EXOSC109887.613Canis_lupus_dingo
ENSMUSG00000017264Exosc109793.333ENSCHIG00000020022EXOSC1010083.449Capra_hircus
ENSMUSG00000017264Exosc109786.000ENSTSYG00000006937EXOSC1010081.787Carlito_syrichta
ENSMUSG00000017264Exosc109293.993ENSCAPG00000006494EXOSC1010086.424Cavia_aperea
ENSMUSG00000017264Exosc109793.167ENSCPOG00000011628EXOSC1010085.963Cavia_porcellus
ENSMUSG00000017264Exosc109585.378ENSCCAG00000023223EXOSC1010086.194Cebus_capucinus
ENSMUSG00000017264Exosc109793.333ENSCATG00000039000EXOSC1010087.239Cercocebus_atys
ENSMUSG00000017264Exosc109792.667ENSCLAG00000005283EXOSC1010087.373Chinchilla_lanigera
ENSMUSG00000017264Exosc109793.333ENSCSAG00000000788EXOSC1010086.697Chlorocebus_sabaeus
ENSMUSG00000017264Exosc109592.164ENSCHOG00000012713EXOSC1010081.186Choloepus_hoffmanni
ENSMUSG00000017264Exosc109481.693ENSCPBG00000022004EXOSC109672.905Chrysemys_picta_bellii
ENSMUSG00000017264Exosc109248.097ENSCSAVG00000009049-10047.731Ciona_savignyi
ENSMUSG00000017264Exosc109792.833ENSCANG00000042813EXOSC1010086.427Colobus_angolensis_palliatus
ENSMUSG00000017264Exosc109796.000ENSCGRG00001018469Exosc1010092.897Cricetulus_griseus_chok1gshd
ENSMUSG00000017264Exosc1010092.672ENSCGRG00000002278Exosc1010092.672Cricetulus_griseus_crigri
ENSMUSG00000017264Exosc109668.297ENSCSEG00000005346exosc109759.888Cynoglossus_semilaevis
ENSMUSG00000017264Exosc109470.517ENSCVAG00000016429exosc109960.603Cyprinodon_variegatus
ENSMUSG00000017264Exosc109269.665ENSDARG00000037708exosc109958.453Danio_rerio
ENSMUSG00000017264Exosc109791.667ENSDNOG00000011301EXOSC1010085.135Dasypus_novemcinctus
ENSMUSG00000017264Exosc109792.667ENSDORG00000003769Exosc1010083.065Dipodomys_ordii
ENSMUSG00000017264Exosc109342.017FBgn0038269Rrp67240.087Drosophila_melanogaster
ENSMUSG00000017264Exosc109490.223ENSETEG00000000830EXOSC1010082.105Echinops_telfairi
ENSMUSG00000017264Exosc107234.342ENSEBUG00000004395exosc109935.047Eptatretus_burgeri
ENSMUSG00000017264Exosc109792.333ENSEASG00005018716EXOSC109692.110Equus_asinus_asinus
ENSMUSG00000017264Exosc109792.333ENSECAG00000011639EXOSC1010087.162Equus_caballus
ENSMUSG00000017264Exosc109183.808ENSEEUG00000001166EXOSC108680.800Erinaceus_europaeus
ENSMUSG00000017264Exosc109469.310ENSELUG00000012870exosc109561.034Esox_lucius
ENSMUSG00000017264Exosc109793.500ENSFCAG00000000052EXOSC1010085.908Felis_catus
ENSMUSG00000017264Exosc109379.167ENSFALG00000010287EXOSC109768.807Ficedula_albicollis
ENSMUSG00000017264Exosc109793.500ENSFDAG00000002942EXOSC1010088.851Fukomys_damarensis
ENSMUSG00000017264Exosc109668.074ENSFHEG00000010678exosc109859.209Fundulus_heteroclitus
ENSMUSG00000017264Exosc108566.286ENSGMOG00000006131exosc108766.286Gadus_morhua
ENSMUSG00000017264Exosc109480.895ENSGALG00000003086EXOSC109670.629Gallus_gallus
ENSMUSG00000017264Exosc109767.828ENSGAFG00000019222exosc109859.932Gambusia_affinis
ENSMUSG00000017264Exosc109668.000ENSGACG00000007037exosc109959.732Gasterosteus_aculeatus
ENSMUSG00000017264Exosc109579.933ENSGAGG00000000251EXOSC1010072.806Gopherus_agassizii
ENSMUSG00000017264Exosc109792.667ENSGGOG00000010572EXOSC1010087.007Gorilla_gorilla
ENSMUSG00000017264Exosc109569.205ENSHBUG00000020328exosc109757.758Haplochromis_burtoni
ENSMUSG00000017264Exosc109793.333ENSHGLG00000011944EXOSC1010088.275Heterocephalus_glaber_female
ENSMUSG00000017264Exosc109793.333ENSHGLG00100014444EXOSC1010088.275Heterocephalus_glaber_male
ENSMUSG00000017264Exosc109567.508ENSHCOG00000016164exosc109860.271Hippocampus_comes
ENSMUSG00000017264Exosc109268.783ENSIPUG00000021971exosc109659.050Ictalurus_punctatus
ENSMUSG00000017264Exosc109794.500ENSSTOG00000005459EXOSC1010089.095Ictidomys_tridecemlineatus
ENSMUSG00000017264Exosc109792.167ENSJJAG00000013716Exosc1010087.599Jaculus_jaculus
ENSMUSG00000017264Exosc109469.072ENSKMAG00000015540exosc109760.000Kryptolebias_marmoratus
ENSMUSG00000017264Exosc109668.519ENSLBEG00000022229exosc109760.388Labrus_bergylta
ENSMUSG00000017264Exosc109773.964ENSLACG00000016691EXOSC1010065.778Latimeria_chalumnae
ENSMUSG00000017264Exosc109474.017ENSLOCG00000006443exosc109864.414Lepisosteus_oculatus
ENSMUSG00000017264Exosc109792.667ENSLAFG00000016894EXOSC1010086.502Loxodonta_africana
ENSMUSG00000017264Exosc109793.333ENSMFAG00000038874EXOSC1010087.239Macaca_fascicularis
ENSMUSG00000017264Exosc109793.167ENSMMUG00000019322EXOSC1010087.123Macaca_mulatta
ENSMUSG00000017264Exosc109793.333ENSMNEG00000035812EXOSC1010087.239Macaca_nemestrina
ENSMUSG00000017264Exosc109793.333ENSMLEG00000025160EXOSC1010087.239Mandrillus_leucophaeus
ENSMUSG00000017264Exosc109470.345ENSMAMG00000019375exosc109761.111Mastacembelus_armatus
ENSMUSG00000017264Exosc109569.625ENSMZEG00005013730exosc109760.658Maylandia_zebra
ENSMUSG00000017264Exosc109280.565ENSMGAG00000004665EXOSC109970.349Meleagris_gallopavo
ENSMUSG00000017264Exosc1010096.926ENSMAUG00000019261Exosc1010096.926Mesocricetus_auratus
ENSMUSG00000017264Exosc109792.167ENSMICG00000003858EXOSC1010087.471Microcebus_murinus
ENSMUSG00000017264Exosc1010095.793ENSMOCG00000016509Exosc1010095.793Microtus_ochrogaster
ENSMUSG00000017264Exosc109468.557ENSMMOG00000009265exosc109858.409Mola_mola
ENSMUSG00000017264Exosc109384.055ENSMODG00000011194EXOSC1010076.345Monodelphis_domestica
ENSMUSG00000017264Exosc109668.687ENSMALG00000021322exosc109760.544Monopterus_albus
ENSMUSG00000017264Exosc1010099.353MGP_CAROLIEiJ_G0026802Exosc1010099.353Mus_caroli
ENSMUSG00000017264Exosc1010098.382MGP_PahariEiJ_G0029150Exosc1010098.382Mus_pahari
ENSMUSG00000017264Exosc1010099.838MGP_SPRETEiJ_G0027795Exosc1010099.838Mus_spretus
ENSMUSG00000017264Exosc109794.000ENSMPUG00000016434EXOSC109786.809Mustela_putorius_furo
ENSMUSG00000017264Exosc109791.667ENSMLUG00000004276EXOSC1010086.374Myotis_lucifugus
ENSMUSG00000017264Exosc109794.000ENSNGAG00000023829Exosc1010089.741Nannospalax_galili
ENSMUSG00000017264Exosc109171.150ENSNBRG00000006256exosc109758.830Neolamprologus_brichardi
ENSMUSG00000017264Exosc109793.333ENSNLEG00000009539EXOSC1010087.324Nomascus_leucogenys
ENSMUSG00000017264Exosc1073100.000ENSMEUG00000007020-73100.000Notamacropus_eugenii
ENSMUSG00000017264Exosc109790.849ENSOPRG00000012091EXOSC1010083.933Ochotona_princeps
ENSMUSG00000017264Exosc109792.833ENSODEG00000013285EXOSC1010087.148Octodon_degus
ENSMUSG00000017264Exosc109570.187ENSONIG00000002322exosc109663.625Oreochromis_niloticus
ENSMUSG00000017264Exosc109578.114ENSOANG00000013322EXOSC109973.274Ornithorhynchus_anatinus
ENSMUSG00000017264Exosc109791.514ENSOCUG00000013039EXOSC1010086.614Oryctolagus_cuniculus
ENSMUSG00000017264Exosc109668.074ENSORLG00000005117exosc1010060.684Oryzias_latipes
ENSMUSG00000017264Exosc109668.074ENSORLG00020013529exosc109662.869Oryzias_latipes_hni
ENSMUSG00000017264Exosc109668.243ENSORLG00015005525exosc109760.751Oryzias_latipes_hsok
ENSMUSG00000017264Exosc109467.993ENSOMEG00000003337exosc109859.752Oryzias_melastigma
ENSMUSG00000017264Exosc1010078.853ENSOGAG00000013662EXOSC1010078.628Otolemur_garnettii
ENSMUSG00000017264Exosc109792.869ENSOARG00000003668EXOSC1010086.869Ovis_aries
ENSMUSG00000017264Exosc109793.000ENSPPAG00000038356EXOSC1010087.239Pan_paniscus
ENSMUSG00000017264Exosc109793.333ENSPPRG00000022976EXOSC1010085.908Panthera_pardus
ENSMUSG00000017264Exosc109593.209ENSPTIG00000012735EXOSC109984.994Panthera_tigris_altaica
ENSMUSG00000017264Exosc109787.667ENSPTRG00000000140EXOSC1010083.411Pan_troglodytes
ENSMUSG00000017264Exosc109791.333ENSPANG00000026088EXOSC1010085.847Papio_anubis
ENSMUSG00000017264Exosc109566.894ENSPKIG00000013098exosc109659.112Paramormyrops_kingsleyae
ENSMUSG00000017264Exosc109481.315ENSPSIG00000005078EXOSC109672.529Pelodiscus_sinensis
ENSMUSG00000017264Exosc109270.526ENSPMGG00000022241exosc109670.526Periophthalmus_magnuspinnatus
ENSMUSG00000017264Exosc109397.054ENSPEMG00000007753Exosc109895.279Peromyscus_maniculatus_bairdii
ENSMUSG00000017264Exosc108053.131ENSPMAG00000006909exosc1010053.131Petromyzon_marinus
ENSMUSG00000017264Exosc109980.196ENSPCIG00000004840EXOSC109482.203Phascolarctos_cinereus
ENSMUSG00000017264Exosc109569.153ENSPFOG00000004744exosc109860.520Poecilia_formosa
ENSMUSG00000017264Exosc109867.267ENSPLAG00000010253exosc109860.294Poecilia_latipinna
ENSMUSG00000017264Exosc109568.983ENSPMEG00000005740exosc109860.520Poecilia_mexicana
ENSMUSG00000017264Exosc109569.205ENSPREG00000016285exosc109860.452Poecilia_reticulata
ENSMUSG00000017264Exosc109792.167ENSPPYG00000001891EXOSC109786.471Pongo_abelii
ENSMUSG00000017264Exosc109483.133ENSPCAG00000001583EXOSC109382.588Procavia_capensis
ENSMUSG00000017264Exosc109792.333ENSPCOG00000013742EXOSC1010087.471Propithecus_coquereli
ENSMUSG00000017264Exosc109793.667ENSPVAG00000014780EXOSC1010086.277Pteropus_vampyrus
ENSMUSG00000017264Exosc109569.795ENSPNYG00000007387exosc109760.771Pundamilia_nyererei
ENSMUSG00000017264Exosc109370.139ENSPNAG00000028864exosc109858.954Pygocentrus_nattereri
ENSMUSG00000017264Exosc1010094.927ENSRNOG00000010719Exosc1010095.265Rattus_norvegicus
ENSMUSG00000017264Exosc1010076.798ENSRBIG00000039772EXOSC1010076.798Rhinopithecus_bieti
ENSMUSG00000017264Exosc109792.833ENSRROG00000036700EXOSC1010086.891Rhinopithecus_roxellana
ENSMUSG00000017264Exosc109232.203YOR001W-7232.203Saccharomyces_cerevisiae
ENSMUSG00000017264Exosc109879.561ENSSBOG00000020768EXOSC1010079.792Saimiri_boliviensis_boliviensis
ENSMUSG00000017264Exosc109184.574ENSSHAG00000013572EXOSC1010076.291Sarcophilus_harrisii
ENSMUSG00000017264Exosc109569.322ENSSFOG00015004512exosc109860.279Scleropages_formosus
ENSMUSG00000017264Exosc109470.447ENSSMAG00000017318exosc109762.215Scophthalmus_maximus
ENSMUSG00000017264Exosc109668.855ENSSDUG00000006646exosc109860.494Seriola_dumerili
ENSMUSG00000017264Exosc109668.114ENSSLDG00000025554exosc109960.582Seriola_lalandi_dorsalis
ENSMUSG00000017264Exosc109466.951ENSSARG00000013171EXOSC109664.739Sorex_araneus
ENSMUSG00000017264Exosc109680.034ENSSPUG00000006844EXOSC109980.034Sphenodon_punctatus
ENSMUSG00000017264Exosc109769.064ENSSPAG00000007053exosc109961.547Stegastes_partitus
ENSMUSG00000017264Exosc108493.810ENSSSCG00000003412EXOSC1010086.443Sus_scrofa
ENSMUSG00000017264Exosc109378.510ENSTGUG00000002231EXOSC1010069.240Taeniopygia_guttata
ENSMUSG00000017264Exosc109270.599ENSTRUG00000012484exosc109757.773Takifugu_rubripes
ENSMUSG00000017264Exosc109469.416ENSTNIG00000015181exosc1010059.909Tetraodon_nigroviridis
ENSMUSG00000017264Exosc107296.241ENSTBEG00000017471-7296.241Tupaia_belangeri
ENSMUSG00000017264Exosc109792.333ENSTTRG00000001320EXOSC1010086.599Tursiops_truncatus
ENSMUSG00000017264Exosc109793.833ENSUAMG00000014404EXOSC109886.753Ursus_americanus
ENSMUSG00000017264Exosc109689.597ENSUMAG00000023413EXOSC109986.020Ursus_maritimus
ENSMUSG00000017264Exosc108895.238ENSVPAG00000004629EXOSC106295.238Vicugna_pacos
ENSMUSG00000017264Exosc109187.578ENSVVUG00000027116EXOSC1010087.578Vulpes_vulpes
ENSMUSG00000017264Exosc109367.652ENSXETG00000006318exosc1010060.367Xenopus_tropicalis
ENSMUSG00000017264Exosc109768.325ENSXCOG00000004665exosc109761.494Xiphophorus_couchianus
ENSMUSG00000017264Exosc109966.559ENSXMAG00000011246exosc1010059.624Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:00001753'-5'-exoribonuclease activity-ISOFunction
GO:0000176nuclear exosome (RNase complex)-ISOComponent
GO:0000178exosome (RNase complex)-ISOComponent
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay-IEAProcess
GO:0000460maturation of 5.8S rRNA-ISOProcess
GO:0000956nuclear-transcribed mRNA catabolic process-ISOProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0003824catalytic activity-IEAFunction
GO:0004518nuclease activity-IEAFunction
GO:0004527exonuclease activity-IEAFunction
GO:0004532exoribonuclease activity-ISOFunction
GO:0005634nucleus-ISOComponent
GO:0005730nucleolus-ISOComponent
GO:0005730nucleolus10708524.TASComponent
GO:0005737cytoplasm-ISOComponent
GO:0005829cytosol-ISOComponent
GO:0006139nucleobase-containing compound metabolic process-IEAProcess
GO:0006364rRNA processing-IEAProcess
GO:0006396RNA processing-IEAProcess
GO:00084083'-5' exonuclease activity-IEAFunction
GO:0009048dosage compensation by inactivation of X chromosome16789828.IMPProcess
GO:0016787hydrolase activity-IEAFunction
GO:0032211negative regulation of telomere maintenance via telomerase-ISOProcess
GO:0035327transcriptionally active chromatin-ISOComponent
GO:0044237cellular metabolic process-IEAProcess
GO:0071028nuclear mRNA surveillance-ISOProcess
GO:0071034CUT catabolic process-ISOProcess
GO:0071035nuclear polyadenylation-dependent rRNA catabolic process-ISOProcess
GO:0071044histone mRNA catabolic process-ISOProcess
GO:0071048nuclear retention of unspliced pre-mRNA at the site of transcription-ISOProcess
GO:1904872regulation of telomerase RNA localization to Cajal body-ISOProcess

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