EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000162178	-	2547	-	ENSMUSP00000125636	313 (aa)	-	F2Z456
ENSMUST00000162834	-	1982	XM_006520283	ENSMUSP00000124062	278 (aa)	XP_006520346	Q9DCN2
ENSMUST00000018186	-	2422	XM_006520282	ENSMUSP00000018186	301 (aa)	XP_006520345	Q9DCN2

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu00520	Amino sugar and nucleotide sugar metabolism	KEGG

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000018042	Cyb5r3	100	88.129	ENSG00000100243	CYB5R3	100	89.796	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004128	cytochrome-b5 reductase activity, acting on NAD(P)H	-	ISO	Function
GO:0005515	protein binding	23055941.	IPI	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0005741	mitochondrial outer membrane	-	IEA	Component
GO:0005743	mitochondrial inner membrane	12865426.	HDA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0005789	endoplasmic reticulum membrane	-	ISO	Component
GO:0006629	lipid metabolic process	-	IEA	Process
GO:0006694	steroid biosynthetic process	-	IEA	Process
GO:0006695	cholesterol biosynthetic process	-	IEA	Process
GO:0008202	steroid metabolic process	-	IEA	Process
GO:0008203	cholesterol metabolic process	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016126	sterol biosynthetic process	-	IEA	Process
GO:0016208	AMP binding	-	ISO	Function
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0043531	ADP binding	-	ISO	Function
GO:0050660	flavin adenine dinucleotide binding	-	ISO	Function
GO:0051287	NAD binding	-	ISO	Function
GO:0055114	oxidation-reduction process	-	IEA	Process
GO:0071949	FAD binding	21873635.	IBA	Function