EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000018102 (Gene tree)
Gene ID: 68024
Gene Symbol: Hist1h2bc
Alias: 2610022J01Rik|H2bfs
Full Name: histone cluster 1%2C H2bc
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 8710
Position: chr13: 23684199-23692908
Accession: 1915274
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000018246	-	1156	-	ENSMUSP00000018246	126 (aa)	-	Q6ZWY9

Gene Model

Click here to download ENSMUSG00000018102's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05034	Alcoholism	KEGG
mmu05203	Viral carcinogenesis	KEGG
mmu05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000018102's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000018102	Hist1h2bc	100	98.413	ENSMUSG00000062727	Hist1h2bk	100	98.413	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002227	innate immune response in mucosa	-	ISO	Process
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0005615	extracellular space	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006334	nucleosome assembly	21873635.	IBA	Process
GO:0019731	antibacterial humoral response	-	ISO	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0050830	defense response to Gram-positive bacterium	-	ISO	Process
GO:0061844	antimicrobial humoral immune response mediated by antimicrobial peptide	-	ISO	Process