EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000018199 (Gene tree)
Gene ID: 20822
Gene Symbol: Trove2
Alias: 1810007I17Rik|A530054J02Rik|SS-A/Ro|Ssa|Ssa2
Full Name: TROVE domain family%2C member 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 26279 bases
Position: chr1:143750790-143777068
Accession: 106652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000125623	TROVE	PF05731.11	8.9e-59	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000018343	-	4335	-	-	- (aa)	-	-
ENSMUST00000159879	-	8738	XM_017319451	ENSMUSP00000125623	538 (aa)	XP_017174940	O08848

Gene Model

Click here to download ENSMUSG00000018199's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000018199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000018199	Trove2	100	89.777	ENSG00000116747	RO60	100	89.777	Homo_sapiens
ENSMUSG00000018199	Trove2	96	53.269	ENSAPOG00000015903	trove2	97	53.269	Acanthochromis_polyacanthus
ENSMUSG00000018199	Trove2	100	89.963	ENSAMEG00000015881	TROVE2	100	89.963	Ailuropoda_melanoleuca
ENSMUSG00000018199	Trove2	100	37.454	ENSACIG00000002080	-	100	37.454	Amphilophus_citrinellus
ENSMUSG00000018199	Trove2	99	47.201	ENSACIG00000010149	trove2	99	47.637	Amphilophus_citrinellus
ENSMUSG00000018199	Trove2	96	53.077	ENSAOCG00000000143	trove2	97	53.077	Amphiprion_ocellaris
ENSMUSG00000018199	Trove2	96	52.885	ENSAPEG00000003310	trove2	97	52.885	Amphiprion_percula
ENSMUSG00000018199	Trove2	97	52.941	ENSATEG00000021195	trove2	100	52.311	Anabas_testudineus
ENSMUSG00000018199	Trove2	100	80.483	ENSAPLG00000003121	TROVE2	100	80.483	Anas_platyrhynchos
ENSMUSG00000018199	Trove2	100	78.996	ENSACAG00000008263	TROVE2	100	78.996	Anolis_carolinensis
ENSMUSG00000018199	Trove2	100	89.405	ENSANAG00000027305	TROVE2	100	89.405	Aotus_nancymaae
ENSMUSG00000018199	Trove2	98	45.788	ENSACLG00000012217	trove2	98	45.788	Astatotilapia_calliptera
ENSMUSG00000018199	Trove2	99	55.140	ENSAMXG00000002118	trove2	99	55.140	Astyanax_mexicanus
ENSMUSG00000018199	Trove2	100	90.706	ENSBTAG00000013812	TROVE2	63	90.706	Bos_taurus
ENSMUSG00000018199	Trove2	98	35.775	WBGene00004405	rop-1	91	35.775	Caenorhabditis_elegans
ENSMUSG00000018199	Trove2	100	89.033	ENSCJAG00000008566	TROVE2	100	89.033	Callithrix_jacchus
ENSMUSG00000018199	Trove2	100	90.520	ENSCAFG00000010552	TROVE2	97	90.520	Canis_familiaris
ENSMUSG00000018199	Trove2	99	90.772	ENSCAFG00020004457	TROVE2	100	90.772	Canis_lupus_dingo
ENSMUSG00000018199	Trove2	100	90.892	ENSCHIG00000018260	TROVE2	100	90.892	Capra_hircus
ENSMUSG00000018199	Trove2	100	88.848	ENSTSYG00000004227	TROVE2	100	88.848	Carlito_syrichta
ENSMUSG00000018199	Trove2	100	60.223	ENSCAPG00000009733	TROVE2	100	60.223	Cavia_aperea
ENSMUSG00000018199	Trove2	100	86.245	ENSCPOG00000000669	TROVE2	100	86.245	Cavia_porcellus
ENSMUSG00000018199	Trove2	87	91.000	ENSCCAG00000027978	TROVE2	100	91.000	Cebus_capucinus
ENSMUSG00000018199	Trove2	100	89.591	ENSCATG00000027732	TROVE2	100	89.591	Cercocebus_atys
ENSMUSG00000018199	Trove2	100	90.335	ENSCLAG00000016391	TROVE2	100	90.335	Chinchilla_lanigera
ENSMUSG00000018199	Trove2	100	89.591	ENSCSAG00000013402	TROVE2	100	89.591	Chlorocebus_sabaeus
ENSMUSG00000018199	Trove2	86	89.119	ENSCHOG00000009571	TROVE2	86	89.119	Choloepus_hoffmanni
ENSMUSG00000018199	Trove2	100	83.271	ENSCPBG00000010558	TROVE2	100	83.271	Chrysemys_picta_bellii
ENSMUSG00000018199	Trove2	69	32.895	ENSCING00000013754	-	93	32.895	Ciona_intestinalis
ENSMUSG00000018199	Trove2	58	33.758	ENSCSAVG00000008738	-	99	33.758	Ciona_savignyi
ENSMUSG00000018199	Trove2	100	89.405	ENSCANG00000041293	TROVE2	100	89.405	Colobus_angolensis_palliatus
ENSMUSG00000018199	Trove2	100	93.866	ENSCGRG00001016925	Trove2	100	93.866	Cricetulus_griseus_chok1gshd
ENSMUSG00000018199	Trove2	100	93.866	ENSCGRG00000003396	Trove2	100	93.866	Cricetulus_griseus_crigri
ENSMUSG00000018199	Trove2	100	52.037	ENSCSEG00000009989	trove2	100	52.037	Cynoglossus_semilaevis
ENSMUSG00000018199	Trove2	100	49.908	ENSCVAG00000008160	trove2	100	49.908	Cyprinodon_variegatus
ENSMUSG00000018199	Trove2	99	53.283	ENSDARG00000089225	trove2	99	53.283	Danio_rerio
ENSMUSG00000018199	Trove2	100	88.104	ENSDNOG00000002157	TROVE2	100	88.104	Dasypus_novemcinctus
ENSMUSG00000018199	Trove2	100	90.706	ENSDORG00000006152	Trove2	100	90.706	Dipodomys_ordii
ENSMUSG00000018199	Trove2	64	86.337	ENSETEG00000018261	TROVE2	100	86.337	Echinops_telfairi
ENSMUSG00000018199	Trove2	100	88.662	ENSEASG00005003388	TROVE2	100	88.662	Equus_asinus_asinus
ENSMUSG00000018199	Trove2	100	89.033	ENSECAG00000018653	TROVE2	100	89.033	Equus_caballus
ENSMUSG00000018199	Trove2	100	87.199	ENSEEUG00000014190	TROVE2	100	87.199	Erinaceus_europaeus
ENSMUSG00000018199	Trove2	97	53.640	ENSELUG00000004473	trove2	97	53.640	Esox_lucius
ENSMUSG00000018199	Trove2	100	90.892	ENSFCAG00000010161	TROVE2	100	90.892	Felis_catus
ENSMUSG00000018199	Trove2	100	77.138	ENSFALG00000002913	TROVE2	100	77.138	Ficedula_albicollis
ENSMUSG00000018199	Trove2	100	90.520	ENSFDAG00000015923	TROVE2	100	90.520	Fukomys_damarensis
ENSMUSG00000018199	Trove2	100	50.832	ENSFHEG00000016128	trove2	100	50.832	Fundulus_heteroclitus
ENSMUSG00000018199	Trove2	100	79.182	ENSGALG00000002504	TROVE2	100	79.182	Gallus_gallus
ENSMUSG00000018199	Trove2	97	51.233	ENSGAFG00000011806	trove2	98	51.233	Gambusia_affinis
ENSMUSG00000018199	Trove2	100	81.970	ENSGAGG00000017742	TROVE2	100	81.970	Gopherus_agassizii
ENSMUSG00000018199	Trove2	100	89.777	ENSGGOG00000034815	TROVE2	100	89.777	Gorilla_gorilla
ENSMUSG00000018199	Trove2	98	47.259	ENSHBUG00000014208	trove2	99	47.259	Haplochromis_burtoni
ENSMUSG00000018199	Trove2	100	90.706	ENSHGLG00000003152	TROVE2	100	90.706	Heterocephalus_glaber_female
ENSMUSG00000018199	Trove2	100	90.706	ENSHGLG00100010586	TROVE2	100	90.706	Heterocephalus_glaber_male
ENSMUSG00000018199	Trove2	100	49.634	ENSHCOG00000004153	trove2	100	49.634	Hippocampus_comes
ENSMUSG00000018199	Trove2	98	50.094	ENSIPUG00000011780	trove2	99	50.094	Ictalurus_punctatus
ENSMUSG00000018199	Trove2	100	81.970	ENSSTOG00000012307	TROVE2	100	81.970	Ictidomys_tridecemlineatus
ENSMUSG00000018199	Trove2	100	90.335	ENSJJAG00000019489	Trove2	100	90.335	Jaculus_jaculus
ENSMUSG00000018199	Trove2	96	51.154	ENSKMAG00000004951	trove2	97	51.154	Kryptolebias_marmoratus
ENSMUSG00000018199	Trove2	100	52.952	ENSLBEG00000009672	trove2	100	52.952	Labrus_bergylta
ENSMUSG00000018199	Trove2	100	75.279	ENSLACG00000007822	TROVE2	99	75.279	Latimeria_chalumnae
ENSMUSG00000018199	Trove2	99	70.974	ENSLOCG00000007384	trove2	99	70.974	Lepisosteus_oculatus
ENSMUSG00000018199	Trove2	100	89.033	ENSLAFG00000014808	TROVE2	100	89.033	Loxodonta_africana
ENSMUSG00000018199	Trove2	100	89.777	ENSMFAG00000016020	TROVE2	100	89.777	Macaca_fascicularis
ENSMUSG00000018199	Trove2	98	89.564	ENSMMUG00000022643	TROVE2	100	88.593	Macaca_mulatta
ENSMUSG00000018199	Trove2	100	89.591	ENSMNEG00000039348	TROVE2	100	89.591	Macaca_nemestrina
ENSMUSG00000018199	Trove2	100	89.591	ENSMLEG00000040042	TROVE2	100	89.591	Mandrillus_leucophaeus
ENSMUSG00000018199	Trove2	96	50.962	ENSMAMG00000002004	trove2	100	50.092	Mastacembelus_armatus
ENSMUSG00000018199	Trove2	98	45.971	ENSMZEG00005008107	trove2	98	45.971	Maylandia_zebra
ENSMUSG00000018199	Trove2	100	79.368	ENSMGAG00000005429	TROVE2	100	79.368	Meleagris_gallopavo
ENSMUSG00000018199	Trove2	100	94.052	ENSMAUG00000008125	Trove2	100	94.052	Mesocricetus_auratus
ENSMUSG00000018199	Trove2	100	90.706	ENSMICG00000011506	TROVE2	100	90.706	Microcebus_murinus
ENSMUSG00000018199	Trove2	100	91.636	ENSMOCG00000021175	Trove2	100	91.636	Microtus_ochrogaster
ENSMUSG00000018199	Trove2	100	51.756	ENSMMOG00000017049	trove2	100	51.756	Mola_mola
ENSMUSG00000018199	Trove2	100	84.015	ENSMODG00000012203	TROVE2	100	84.015	Monodelphis_domestica
ENSMUSG00000018199	Trove2	100	52.126	ENSMALG00000007367	trove2	100	52.126	Monopterus_albus
ENSMUSG00000018199	Trove2	100	97.212	MGP_CAROLIEiJ_G0014676	Trove2	100	97.212	Mus_caroli
ENSMUSG00000018199	Trove2	100	95.725	MGP_PahariEiJ_G0027912	Trove2	91	95.725	Mus_pahari
ENSMUSG00000018199	Trove2	100	98.141	MGP_SPRETEiJ_G0015483	Trove2	100	98.141	Mus_spretus
ENSMUSG00000018199	Trove2	100	90.149	ENSMPUG00000004631	TROVE2	100	90.149	Mustela_putorius_furo
ENSMUSG00000018199	Trove2	99	88.972	ENSMLUG00000001442	TROVE2	99	88.972	Myotis_lucifugus
ENSMUSG00000018199	Trove2	100	90.335	ENSNGAG00000015898	Trove2	100	90.335	Nannospalax_galili
ENSMUSG00000018199	Trove2	98	47.826	ENSNBRG00000005311	trove2	97	47.826	Neolamprologus_brichardi
ENSMUSG00000018199	Trove2	100	89.405	ENSNLEG00000018048	TROVE2	100	89.405	Nomascus_leucogenys
ENSMUSG00000018199	Trove2	75	94.000	ENSMEUG00000005618	-	76	94.000	Notamacropus_eugenii
ENSMUSG00000018199	Trove2	75	73.317	ENSOPRG00000017247	TROVE2	100	73.317	Ochotona_princeps
ENSMUSG00000018199	Trove2	100	90.520	ENSODEG00000010468	TROVE2	100	90.520	Octodon_degus
ENSMUSG00000018199	Trove2	98	46.886	ENSONIG00000018579	trove2	99	46.886	Oreochromis_niloticus
ENSMUSG00000018199	Trove2	99	84.358	ENSOANG00000002961	TROVE2	99	84.358	Ornithorhynchus_anatinus
ENSMUSG00000018199	Trove2	100	88.290	ENSOCUG00000012814	TROVE2	100	88.290	Oryctolagus_cuniculus
ENSMUSG00000018199	Trove2	96	50.677	ENSORLG00000010951	trove2	97	51.257	Oryzias_latipes
ENSMUSG00000018199	Trove2	96	50.870	ENSORLG00020009759	trove2	97	51.451	Oryzias_latipes_hni
ENSMUSG00000018199	Trove2	96	50.870	ENSORLG00015004497	trove2	97	51.451	Oryzias_latipes_hsok
ENSMUSG00000018199	Trove2	100	48.727	ENSOMEG00000010440	trove2	100	48.727	Oryzias_melastigma
ENSMUSG00000018199	Trove2	98	90.152	ENSOGAG00000032047	TROVE2	99	90.152	Otolemur_garnettii
ENSMUSG00000018199	Trove2	100	90.892	ENSOARG00000009462	TROVE2	96	90.892	Ovis_aries
ENSMUSG00000018199	Trove2	100	89.591	ENSPPAG00000043846	TROVE2	100	89.591	Pan_paniscus
ENSMUSG00000018199	Trove2	100	90.520	ENSPPRG00000017233	TROVE2	100	90.520	Panthera_pardus
ENSMUSG00000018199	Trove2	100	90.335	ENSPTIG00000015535	TROVE2	100	90.335	Panthera_tigris_altaica
ENSMUSG00000018199	Trove2	100	89.963	ENSPTRG00000001794	TROVE2	100	89.963	Pan_troglodytes
ENSMUSG00000018199	Trove2	100	89.591	ENSPANG00000000341	TROVE2	100	89.591	Papio_anubis
ENSMUSG00000018199	Trove2	95	57.895	ENSPKIG00000018217	trove2	98	57.895	Paramormyrops_kingsleyae
ENSMUSG00000018199	Trove2	100	81.784	ENSPSIG00000009877	TROVE2	100	81.784	Pelodiscus_sinensis
ENSMUSG00000018199	Trove2	100	92.937	ENSPEMG00000001419	Trove2	100	92.937	Peromyscus_maniculatus_bairdii
ENSMUSG00000018199	Trove2	100	84.015	ENSPCIG00000028632	TROVE2	100	84.015	Phascolarctos_cinereus
ENSMUSG00000018199	Trove2	100	49.908	ENSPFOG00000006974	trove2	100	49.908	Poecilia_formosa
ENSMUSG00000018199	Trove2	100	50.277	ENSPLAG00000009027	trove2	100	50.277	Poecilia_latipinna
ENSMUSG00000018199	Trove2	100	50.092	ENSPMEG00000015081	trove2	99	50.092	Poecilia_mexicana
ENSMUSG00000018199	Trove2	100	50.277	ENSPREG00000005674	trove2	100	50.277	Poecilia_reticulata
ENSMUSG00000018199	Trove2	100	89.591	ENSPPYG00000000397	TROVE2	100	89.591	Pongo_abelii
ENSMUSG00000018199	Trove2	100	88.104	ENSPCAG00000003959	TROVE2	100	88.104	Procavia_capensis
ENSMUSG00000018199	Trove2	100	90.149	ENSPCOG00000015951	-	100	90.149	Propithecus_coquereli
ENSMUSG00000018199	Trove2	91	85.832	ENSPVAG00000001182	TROVE2	100	85.832	Pteropus_vampyrus
ENSMUSG00000018199	Trove2	98	46.154	ENSPNYG00000020148	trove2	98	46.154	Pundamilia_nyererei
ENSMUSG00000018199	Trove2	96	55.192	ENSPNAG00000024223	trove2	96	55.192	Pygocentrus_nattereri
ENSMUSG00000018199	Trove2	100	93.494	ENSRNOG00000003434	Trove2	100	93.494	Rattus_norvegicus
ENSMUSG00000018199	Trove2	100	89.591	ENSRBIG00000030073	TROVE2	100	89.591	Rhinopithecus_bieti
ENSMUSG00000018199	Trove2	100	89.591	ENSRROG00000034428	TROVE2	100	89.591	Rhinopithecus_roxellana
ENSMUSG00000018199	Trove2	100	89.591	ENSSBOG00000024070	TROVE2	100	89.591	Saimiri_boliviensis_boliviensis
ENSMUSG00000018199	Trove2	100	83.829	ENSSHAG00000013205	TROVE2	100	83.829	Sarcophilus_harrisii
ENSMUSG00000018199	Trove2	98	62.500	ENSSFOG00015011990	trove2	97	62.500	Scleropages_formosus
ENSMUSG00000018199	Trove2	96	52.308	ENSSMAG00000009058	trove2	96	52.308	Scophthalmus_maximus
ENSMUSG00000018199	Trove2	100	52.030	ENSSDUG00000009083	trove2	100	52.030	Seriola_dumerili
ENSMUSG00000018199	Trove2	100	52.030	ENSSLDG00000019857	trove2	100	52.030	Seriola_lalandi_dorsalis
ENSMUSG00000018199	Trove2	100	87.546	ENSSARG00000009347	TROVE2	100	87.546	Sorex_araneus
ENSMUSG00000018199	Trove2	100	83.086	ENSSPUG00000014304	TROVE2	100	83.086	Sphenodon_punctatus
ENSMUSG00000018199	Trove2	96	53.269	ENSSPAG00000003171	trove2	97	53.269	Stegastes_partitus
ENSMUSG00000018199	Trove2	100	87.732	ENSSSCG00000032055	TROVE2	100	87.732	Sus_scrofa
ENSMUSG00000018199	Trove2	96	80.934	ENSTGUG00000004126	TROVE2	100	80.934	Taeniopygia_guttata
ENSMUSG00000018199	Trove2	100	50.556	ENSTRUG00000009656	trove2	100	50.556	Takifugu_rubripes
ENSMUSG00000018199	Trove2	100	52.778	ENSTNIG00000007802	trove2	100	52.778	Tetraodon_nigroviridis
ENSMUSG00000018199	Trove2	75	88.776	ENSTBEG00000006806	TROVE2	83	88.776	Tupaia_belangeri
ENSMUSG00000018199	Trove2	99	90.056	ENSTTRG00000009291	TROVE2	99	90.056	Tursiops_truncatus
ENSMUSG00000018199	Trove2	100	90.706	ENSUAMG00000013365	TROVE2	100	90.706	Ursus_americanus
ENSMUSG00000018199	Trove2	100	90.520	ENSUMAG00000020464	TROVE2	100	90.520	Ursus_maritimus
ENSMUSG00000018199	Trove2	85	98.000	ENSVPAG00000010303	TROVE2	85	98.000	Vicugna_pacos
ENSMUSG00000018199	Trove2	96	90.272	ENSVVUG00000013405	TROVE2	72	90.272	Vulpes_vulpes
ENSMUSG00000018199	Trove2	100	76.022	ENSXETG00000017224	trove2	100	76.022	Xenopus_tropicalis
ENSMUSG00000018199	Trove2	100	45.985	ENSXCOG00000007527	trove2	98	46.792	Xiphophorus_couchianus
ENSMUSG00000018199	Trove2	100	50.462	ENSXMAG00000004825	trove2	100	50.462	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002520	immune system development	12788971.	IMP	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	14680639.	IDA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0005634	nucleus	14680639.	IDA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	14680639.	IDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0007224	smoothened signaling pathway	21289087.	IMP	Process
GO:0009411	response to UV	14680639.	IDA	Process
GO:0009411	response to UV	12788971.	IMP	Process
GO:0010468	regulation of gene expression	-	ISO	Process
GO:0030030	cell projection organization	-	IEA	Process
GO:0030620	U2 snRNA binding	14680639.	IDA	Function
GO:0034336	misfolded RNA binding	14680639.	ISO	Function
GO:0035457	cellular response to interferon-alpha	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0060271	cilium assembly	21289087.	IMP	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component
GO:1990904	ribonucleoprotein complex	14680639.	IDA	Component
GO:1990904	ribonucleoprotein complex	-	ISO	Component