EuRBPDB

Description

Ensembl ID: ENSMUSG00000018326 (Gene tree)
Gene ID: 54401
Gene Symbol: Ywhab
Alias: 1300003C17Rik|14-3-3 beta|14-3-3b
Full Name: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein%2C beta polypeptide
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 23629
Position: chr2: 163994960-164018588
Accession: 1891917
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000131288	-	849	-	ENSMUSP00000117125	159 (aa)	-	A2A5N1
ENSMUST00000018470	-	3013	XM_006499909	ENSMUSP00000018470	246 (aa)	XP_006499972	Q9CQV8

Gene Model

Pathways

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000018326	Ywhab	99	78.367	WBGene00001502	ftt-2	99	78.367	Caenorhabditis_elegans
ENSMUSG00000018326	Ywhab	99	78.189	FBgn0004907	14-3-3zeta	98	78.189	Drosophila_melanogaster
ENSMUSG00000018326	Ywhab	100	98.780	ENSG00000166913	YWHAB	100	100.000	Homo_sapiens
ENSMUSG00000018326	Ywhab	98	87.190	ENSG00000164924	YWHAZ	100	92.157	Homo_sapiens
ENSMUSG00000018326	Ywhab	98	80.992	ENSG00000134308	YWHAQ	99	80.992	Homo_sapiens
ENSMUSG00000018326	Ywhab	98	86.777	ENSMUSG00000022285	Ywhaz	100	92.308	Mus_musculus
ENSMUSG00000018326	Ywhab	98	80.992	ENSMUSG00000076432	Ywhaq	99	80.992	Mus_musculus
ENSMUSG00000018326	Ywhab	94	68.376	ENSMUSG00000047281	Sfn	96	68.201	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	12937170.15883195.16099986.16635246.18237277.18604201.19429675.19915011.21390248.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006605	protein targeting	12446771.	IDA	Process
GO:0008022	protein C-terminus binding	-	ISO	Function
GO:0017053	transcriptional repressor complex	-	ISO	Component
GO:0019899	enzyme binding	-	ISO	Function
GO:0019904	protein domain specific binding	12446771.	IDA	Function
GO:0019904	protein domain specific binding	-	ISO	Function
GO:0032991	protein-containing complex	-	ISO	Component
GO:0035308	negative regulation of protein dephosphorylation	-	ISO	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0042826	histone deacetylase binding	-	ISO	Function
GO:0043085	positive regulation of catalytic activity	-	ISO	Process
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0045744	negative regulation of G protein-coupled receptor signaling pathway	-	ISO	Process
GO:0045892	negative regulation of transcription, DNA-templated	-	ISO	Process
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0050815	phosphoserine residue binding	-	ISO	Function
GO:0051219	phosphoprotein binding	-	ISO	Function
GO:0051220	cytoplasmic sequestering of protein	-	ISO	Process
GO:0051291	protein heterooligomerization	-	ISO	Process