EuRBPDB

Description

Ensembl ID: ENSMUSG00000018362 (Gene tree)
Gene ID: 16647
Gene Symbol: Kpna2
Alias: 2410044B12Rik|Importin alpha|Rch1|importin alpha 1|m-importin|m-importin-alpha-P1|pendulin
Full Name: karyopherin (importin) alpha 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 10913
Position: chr11: 106988629-106999541
Accession: 103561
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000156495	-	534	-	-	- (aa)	-	-
ENSMUST00000145331	-	1843	-	ENSMUSP00000122983	75 (aa)	-	F2Z431
ENSMUST00000018506	-	2054	-	ENSMUSP00000018506	529 (aa)	-	P52293
ENSMUST00000124541	-	659	-	ENSMUSP00000114636	170 (aa)	-	A2A601
ENSMUST00000144834	-	732	-	ENSMUSP00000121655	163 (aa)	-	A2A600
ENSMUST00000140362	-	568	-	ENSMUSP00000118679	189 (aa)	-	A6PW68
ENSMUST00000106768	-	541	-	ENSMUSP00000102379	80 (aa)	-	A2A602

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000018362	Kpna2	95	37.765	WBGene00002073	ima-2	97	37.765	Caenorhabditis_elegans
ENSMUSG00000018362	Kpna2	100	95.294	ENSG00000182481	KPNA2	100	94.518	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	10764582.12695505.12941609.18405666.19324890.20699224.20965181.25283549.25599645.26420826.	IPI	Function
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006606	protein import into nucleus	15689618.15719015.	IDA	Process
GO:0006607	NLS-bearing protein import into nucleus	-	ISO	Process
GO:0008139	nuclear localization sequence binding	-	ISO	Function
GO:0008565	protein transporter activity	15689618.15719015.	IDA	Function
GO:0010494	cytoplasmic stress granule	27430620.	IDA	Component
GO:0042826	histone deacetylase binding	-	ISO	Function
GO:0070491	repressing transcription factor binding	12695505.	IPI	Function
GO:0075506	entry of viral genome into host nucleus through nuclear pore complex via importin	28189564.	IMP	Process
GO:0075506	entry of viral genome into host nucleus through nuclear pore complex via importin	28189564.	ISO	Process
GO:0098892	extrinsic component of postsynaptic specialization membrane	-	ISO	Component
GO:0098978	glutamatergic synapse	-	ISO	Component
GO:0099527	postsynapse to nucleus signaling pathway	-	ISO	Process
GO:1903902	positive regulation of viral life cycle	28189564.	IMP	Process
GO:1903902	positive regulation of viral life cycle	28189564.	ISO	Process