EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000018433 (Gene tree)
Gene ID: 68979
Gene Symbol: Nol11
Alias: 1500002M01Rik
Full Name: nucleolar protein 11
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 22719 bases
Position: chr11:107166663-107189381
Accession: 1916229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000102368	NUC205	PF08168.11	1.7e-22	1	1
ENSMUSP00000018577	NUC205	PF08168.11	1.7e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000136917	-	2704	-	-	- (aa)	-	-
ENSMUST00000106757	-	3098	-	ENSMUSP00000102368	703 (aa)	-	Q8BJW5
ENSMUST00000139168	-	619	-	-	- (aa)	-	-
ENSMUST00000018577	-	3158	XM_017314734	ENSMUSP00000018577	723 (aa)	-	Q8BJW5
ENSMUST00000122966	-	434	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000018433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000018433's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000018433	Nol11	100	76.033	ENSG00000130935	NOL11	100	76.033	Homo_sapiens
ENSMUSG00000018433	Nol11	90	73.476	ENSAMEG00000018406	NOL11	100	73.476	Ailuropoda_melanoleuca
ENSMUSG00000018433	Nol11	93	52.299	ENSAPLG00000006588	NOL11	100	52.299	Anas_platyrhynchos
ENSMUSG00000018433	Nol11	99	50.746	ENSACAG00000000253	NOL11	99	50.746	Anolis_carolinensis
ENSMUSG00000018433	Nol11	100	74.207	ENSANAG00000032675	NOL11	100	74.207	Aotus_nancymaae
ENSMUSG00000018433	Nol11	100	75.310	ENSBTAG00000015951	NOL11	100	75.310	Bos_taurus
ENSMUSG00000018433	Nol11	100	74.207	ENSCJAG00000008775	NOL11	100	74.207	Callithrix_jacchus
ENSMUSG00000018433	Nol11	100	75.586	ENSCAFG00000011500	NOL11	100	75.586	Canis_familiaris
ENSMUSG00000018433	Nol11	100	75.724	ENSCAFG00020026235	NOL11	100	75.724	Canis_lupus_dingo
ENSMUSG00000018433	Nol11	100	75.034	ENSCHIG00000025602	NOL11	100	75.034	Capra_hircus
ENSMUSG00000018433	Nol11	100	71.310	ENSTSYG00000004693	NOL11	100	71.310	Carlito_syrichta
ENSMUSG00000018433	Nol11	93	61.280	ENSCAPG00000009765	NOL11	100	61.280	Cavia_aperea
ENSMUSG00000018433	Nol11	100	72.977	ENSCPOG00000011415	NOL11	100	72.977	Cavia_porcellus
ENSMUSG00000018433	Nol11	100	73.931	ENSCCAG00000021153	NOL11	100	73.931	Cebus_capucinus
ENSMUSG00000018433	Nol11	100	67.127	ENSCATG00000036259	-	100	67.127	Cercocebus_atys
ENSMUSG00000018433	Nol11	100	73.655	ENSCATG00000026067	NOL11	100	73.655	Cercocebus_atys
ENSMUSG00000018433	Nol11	100	71.271	ENSCLAG00000002744	NOL11	100	71.271	Chinchilla_lanigera
ENSMUSG00000018433	Nol11	100	75.862	ENSCSAG00000004179	NOL11	100	75.862	Chlorocebus_sabaeus
ENSMUSG00000018433	Nol11	76	72.340	ENSCHOG00000011318	NOL11	76	72.340	Choloepus_hoffmanni
ENSMUSG00000018433	Nol11	99	56.640	ENSCPBG00000009509	NOL11	99	56.911	Chrysemys_picta_bellii
ENSMUSG00000018433	Nol11	100	59.530	ENSCANG00000031851	-	100	59.530	Colobus_angolensis_palliatus
ENSMUSG00000018433	Nol11	100	71.034	ENSCANG00000028145	NOL11	100	71.034	Colobus_angolensis_palliatus
ENSMUSG00000018433	Nol11	100	87.967	ENSCGRG00001024010	Nol11	100	87.967	Cricetulus_griseus_chok1gshd
ENSMUSG00000018433	Nol11	100	87.967	ENSCGRG00000012819	Nol11	100	87.967	Cricetulus_griseus_crigri
ENSMUSG00000018433	Nol11	100	71.331	ENSDNOG00000013861	NOL11	100	71.331	Dasypus_novemcinctus
ENSMUSG00000018433	Nol11	67	68.116	ENSETEG00000009762	-	80	68.116	Echinops_telfairi
ENSMUSG00000018433	Nol11	96	74.462	ENSEASG00005015876	NOL11	98	74.462	Equus_asinus_asinus
ENSMUSG00000018433	Nol11	100	74.207	ENSECAG00000008252	NOL11	100	74.207	Equus_caballus
ENSMUSG00000018433	Nol11	74	81.579	ENSEEUG00000000522	-	73	81.579	Erinaceus_europaeus
ENSMUSG00000018433	Nol11	100	73.967	ENSFCAG00000026399	NOL11	100	73.967	Felis_catus
ENSMUSG00000018433	Nol11	100	74.965	ENSFDAG00000005726	NOL11	100	74.965	Fukomys_damarensis
ENSMUSG00000018433	Nol11	100	52.554	ENSGALG00000003650	NOL11	100	52.767	Gallus_gallus
ENSMUSG00000018433	Nol11	100	76.000	ENSGGOG00000011155	NOL11	100	76.000	Gorilla_gorilla
ENSMUSG00000018433	Nol11	100	63.862	ENSGGOG00000022151	-	100	63.862	Gorilla_gorilla
ENSMUSG00000018433	Nol11	100	75.242	ENSHGLG00000003039	NOL11	100	75.242	Heterocephalus_glaber_female
ENSMUSG00000018433	Nol11	100	75.242	ENSHGLG00100002623	NOL11	100	75.242	Heterocephalus_glaber_male
ENSMUSG00000018433	Nol11	100	76.000	ENSSTOG00000003704	NOL11	100	76.000	Ictidomys_tridecemlineatus
ENSMUSG00000018433	Nol11	100	75.242	ENSJJAG00000019386	Nol11	100	75.242	Jaculus_jaculus
ENSMUSG00000018433	Nol11	100	45.626	ENSLACG00000013558	NOL11	100	45.895	Latimeria_chalumnae
ENSMUSG00000018433	Nol11	100	72.790	ENSLAFG00000002021	NOL11	100	72.790	Loxodonta_africana
ENSMUSG00000018433	Nol11	100	76.276	ENSMFAG00000030117	NOL11	100	76.276	Macaca_fascicularis
ENSMUSG00000018433	Nol11	100	74.069	ENSMMUG00000002414	NOL11	100	74.069	Macaca_mulatta
ENSMUSG00000018433	Nol11	100	74.621	ENSMNEG00000029864	NOL11	100	74.621	Macaca_nemestrina
ENSMUSG00000018433	Nol11	100	67.541	ENSMNEG00000032718	-	100	67.541	Macaca_nemestrina
ENSMUSG00000018433	Nol11	100	67.265	ENSMLEG00000028816	-	100	67.265	Mandrillus_leucophaeus
ENSMUSG00000018433	Nol11	100	72.503	ENSMLEG00000024403	NOL11	100	72.503	Mandrillus_leucophaeus
ENSMUSG00000018433	Nol11	93	53.188	ENSMGAG00000007511	NOL11	100	53.188	Meleagris_gallopavo
ENSMUSG00000018433	Nol11	100	87.690	ENSMAUG00000009375	Nol11	100	87.690	Mesocricetus_auratus
ENSMUSG00000018433	Nol11	99	75.419	ENSMICG00000017576	NOL11	96	75.419	Microcebus_murinus
ENSMUSG00000018433	Nol11	100	86.629	ENSMOCG00000012117	Nol11	100	86.629	Microtus_ochrogaster
ENSMUSG00000018433	Nol11	100	61.224	ENSMODG00000003956	NOL11	100	61.224	Monodelphis_domestica
ENSMUSG00000018433	Nol11	100	96.404	MGP_CAROLIEiJ_G0017334	Nol11	100	96.404	Mus_caroli
ENSMUSG00000018433	Nol11	100	98.893	MGP_SPRETEiJ_G0018178	Nol11	100	98.893	Mus_spretus
ENSMUSG00000018433	Nol11	100	74.345	ENSMPUG00000014685	NOL11	100	74.345	Mustela_putorius_furo
ENSMUSG00000018433	Nol11	67	63.158	ENSMLUG00000024296	-	99	63.360	Myotis_lucifugus
ENSMUSG00000018433	Nol11	100	74.415	ENSMLUG00000013484	-	100	74.415	Myotis_lucifugus
ENSMUSG00000018433	Nol11	100	79.261	ENSNGAG00000016886	Nol11	100	79.261	Nannospalax_galili
ENSMUSG00000018433	Nol11	100	75.724	ENSNLEG00000001436	NOL11	100	75.724	Nomascus_leucogenys
ENSMUSG00000018433	Nol11	100	68.828	ENSNLEG00000013566	-	100	68.828	Nomascus_leucogenys
ENSMUSG00000018433	Nol11	51	57.082	ENSMEUG00000003244	-	66	57.082	Notamacropus_eugenii
ENSMUSG00000018433	Nol11	76	79.389	ENSOPRG00000008767	NOL11	75	79.389	Ochotona_princeps
ENSMUSG00000018433	Nol11	100	60.719	ENSODEG00000007922	NOL11	100	60.719	Octodon_degus
ENSMUSG00000018433	Nol11	93	55.900	ENSOANG00000008052	NOL11	100	55.900	Ornithorhynchus_anatinus
ENSMUSG00000018433	Nol11	100	76.000	ENSOCUG00000015612	NOL11	100	76.000	Oryctolagus_cuniculus
ENSMUSG00000018433	Nol11	95	73.478	ENSOGAG00000000668	NOL11	100	73.478	Otolemur_garnettii
ENSMUSG00000018433	Nol11	100	74.897	ENSOARG00000015771	NOL11	100	74.897	Ovis_aries
ENSMUSG00000018433	Nol11	100	64.276	ENSPPAG00000043892	-	100	64.276	Pan_paniscus
ENSMUSG00000018433	Nol11	100	75.620	ENSPPAG00000032763	NOL11	100	75.620	Pan_paniscus
ENSMUSG00000018433	Nol11	100	74.105	ENSPPRG00000025048	NOL11	100	74.105	Panthera_pardus
ENSMUSG00000018433	Nol11	100	73.967	ENSPTIG00000018044	NOL11	100	73.967	Panthera_tigris_altaica
ENSMUSG00000018433	Nol11	100	64.138	ENSPTRG00000043276	-	100	64.138	Pan_troglodytes
ENSMUSG00000018433	Nol11	100	75.895	ENSPTRG00000009566	NOL11	100	75.895	Pan_troglodytes
ENSMUSG00000018433	Nol11	100	75.862	ENSPANG00000020519	NOL11	100	75.862	Papio_anubis
ENSMUSG00000018433	Nol11	99	55.345	ENSPSIG00000007198	NOL11	99	55.345	Pelodiscus_sinensis
ENSMUSG00000018433	Nol11	100	88.762	ENSPEMG00000006648	-	100	88.762	Peromyscus_maniculatus_bairdii
ENSMUSG00000018433	Nol11	100	76.381	ENSPEMG00000014781	-	100	76.381	Peromyscus_maniculatus_bairdii
ENSMUSG00000018433	Nol11	100	60.544	ENSPCIG00000019293	NOL11	100	60.544	Phascolarctos_cinereus
ENSMUSG00000018433	Nol11	100	75.172	ENSPPYG00000008567	NOL11	100	75.172	Pongo_abelii
ENSMUSG00000018433	Nol11	85	74.468	ENSPCAG00000009216	NOL11	85	74.468	Procavia_capensis
ENSMUSG00000018433	Nol11	84	78.857	ENSPVAG00000016037	NOL11	84	78.857	Pteropus_vampyrus
ENSMUSG00000018433	Nol11	100	87.707	ENSRNOG00000052934	Nol11	100	87.707	Rattus_norvegicus
ENSMUSG00000018433	Nol11	95	65.497	ENSRBIG00000039495	-	94	65.497	Rhinopithecus_bieti
ENSMUSG00000018433	Nol11	100	75.586	ENSRROG00000002781	NOL11	100	75.586	Rhinopithecus_roxellana
ENSMUSG00000018433	Nol11	100	73.793	ENSSBOG00000036070	NOL11	100	73.793	Saimiri_boliviensis_boliviensis
ENSMUSG00000018433	Nol11	100	60.952	ENSSHAG00000008470	NOL11	100	61.264	Sarcophilus_harrisii
ENSMUSG00000018433	Nol11	100	74.621	ENSSSCG00000017275	NOL11	100	74.621	Sus_scrofa
ENSMUSG00000018433	Nol11	82	72.959	ENSTBEG00000007114	-	82	71.628	Tupaia_belangeri
ENSMUSG00000018433	Nol11	100	74.621	ENSTTRG00000013960	NOL11	100	74.621	Tursiops_truncatus
ENSMUSG00000018433	Nol11	100	75.448	ENSUAMG00000028064	NOL11	100	75.448	Ursus_americanus
ENSMUSG00000018433	Nol11	100	75.586	ENSUMAG00000018710	NOL11	100	75.586	Ursus_maritimus
ENSMUSG00000018433	Nol11	100	72.138	ENSVPAG00000001852	NOL11	100	72.138	Vicugna_pacos
ENSMUSG00000018433	Nol11	100	72.138	ENSVVUG00000006471	NOL11	100	72.138	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0030490	maturation of SSU-rRNA	-	ISO	Process
GO:0034455	t-UTP complex	-	ISO	Component
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:1901838	positive regulation of transcription of nucleolar large rRNA by RNA polymerase I	-	ISO	Process