EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000018965 (Gene tree)
Gene ID: 22629
Gene Symbol: Ywhah
Alias: 14-3-3 eta
Full Name: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein%2C eta polypeptide
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 9151
Position: chr5: 33018816-33027966
Accession: 109194
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000019109	-	1764	-	ENSMUSP00000019109	246 (aa)	-	P68510
ENSMUST00000199651	-	2181	-	-	- (aa)	-	-
ENSMUST00000138261	-	904	-	-	- (aa)	-	-
ENSMUST00000136667	-	481	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000018965's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04110	Cell cycle	KEGG
mmu04114	Oocyte meiosis	KEGG
mmu04151	PI3K-Akt signaling pathway	KEGG
mmu04390	Hippo signaling pathway	KEGG
mmu05160	Hepatitis C	KEGG
mmu05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000018965's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000018965	Ywhah	100	99.187	ENSG00000128245	YWHAH	100	99.187	Homo_sapiens
ENSMUSG00000018965	Ywhah	100	86.992	ENSG00000170027	YWHAG	99	86.992	Homo_sapiens
ENSMUSG00000018965	Ywhah	99	63.265	ENSG00000108953	YWHAE	100	69.565	Homo_sapiens
ENSMUSG00000018965	Ywhah	100	86.992	ENSMUSG00000051391	Ywhag	99	86.992	Mus_musculus
ENSMUSG00000018965	Ywhah	99	63.265	ENSMUSG00000020849	Ywhae	94	63.265	Mus_musculus
ENSMUSG00000018965	Ywhah	95	63.248	YDR099W	BMH2	85	63.248	Saccharomyces_cerevisiae
ENSMUSG00000018965	Ywhah	98	61.728	YER177W	BMH1	87	63.248	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002028	regulation of sodium ion transport	-	ISO	Process
GO:0002028	regulation of sodium ion transport	16728661.	ISS	Process
GO:0003779	actin binding	12176032.	IDA	Function
GO:0005515	protein binding	9299557.9738002.16096643.21390248.	IPI	Function
GO:0005737	cytoplasm	9738002.	IDA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006713	glucocorticoid catabolic process	-	ISO	Process
GO:0006886	intracellular protein transport	12446771.	IDA	Process
GO:0007010	cytoskeleton organization	12176032.	NAS	Process
GO:0007088	regulation of mitotic nuclear division	12176032.	NAS	Process
GO:0014704	intercalated disc	16728661.	IC	Component
GO:0017080	sodium channel regulator activity	-	ISO	Function
GO:0017080	sodium channel regulator activity	16728661.	ISS	Function
GO:0019899	enzyme binding	-	ISO	Function
GO:0019904	protein domain specific binding	12446771.	IDA	Function
GO:0035259	glucocorticoid receptor binding	-	ISO	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0042921	glucocorticoid receptor signaling pathway	-	ISO	Process
GO:0043066	negative regulation of apoptotic process	12176032.	NAS	Process
GO:0044325	ion channel binding	16728661.	IPI	Function
GO:0044325	ion channel binding	-	ISO	Function
GO:0045202	synapse	-	ISO	Component
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0046982	protein heterodimerization activity	-	ISO	Function
GO:0050774	negative regulation of dendrite morphogenesis	9738002.	IDA	Process
GO:0086010	membrane depolarization during action potential	-	ISO	Process
GO:0086010	membrane depolarization during action potential	16728661.	ISS	Process
GO:0098793	presynapse	15543142.	IDA	Component
GO:0098978	glutamatergic synapse	15543142.	IDA	Component
GO:2000649	regulation of sodium ion transmembrane transporter activity	-	ISO	Process
GO:2000649	regulation of sodium ion transmembrane transporter activity	16728661.	ISS	Process