EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000019173 (Gene tree)
Gene ID
19345
Gene Symbol
Rab5c
Alias
-
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
23207 bases
Position
chr11:100715009-100738215
Accession
105306
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000102987MMR_HSR1PF01926.230.0002711
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000107364-1915-ENSMUSP00000102987216 (aa)-P35278
ENSMUST00000155843-412-ENSMUSP0000012358183 (aa)-A2A5F5
ENSMUST00000155500-441-ENSMUSP0000011765634 (aa)-A2A5F6
ENSMUST00000019317-1967-ENSMUSP00000019317234 (aa)-Q8C266
Gene Model
Click here to download ENSMUSG00000019173's gene model file
Pathways
Pathway IDPathway NameSource
mmu04014Ras signaling pathwayKEGG
mmu04144EndocytosisKEGG
mmu04145PhagosomeKEGG
mmu04962Vasopressin-regulated water reabsorptionKEGG
mmu05146AmoebiasisKEGG
mmu05152TuberculosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000019173's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000019173Rab5c8941.089ENSMUSG00000008601Rab259341.089
ENSMUSG00000019173Rab5c8638.806ENSMUSG00000023460Rab129036.000
ENSMUSG00000019173Rab5c5531.967ENSMUSG00000030105Arl8b6231.967
ENSMUSG00000019173Rab5c7545.062ENSMUSG00000073639Rab187845.062
ENSMUSG00000019173Rab5c8934.848ENSMUSG00000079316Rab99734.848
ENSMUSG00000019173Rab5c7548.447ENSMUSG00000077450Rab11b8949.624
ENSMUSG00000019173Rab5c7842.012ENSMUSG00000030643Rab309246.939
ENSMUSG00000019173Rab5c7335.625ENSMUSG00000020175Rab366035.625
ENSMUSG00000019173Rab5c8944.330ENSMUSG00000024870Rab1b9644.330
ENSMUSG00000019173Rab5c8935.784ENSMUSG00000021062Rab159535.784
ENSMUSG00000019173Rab5c7832.544ENSMUSG00000083649Rasl2-97732.544
ENSMUSG00000019173Rab5c8940.206ENSMUSG00000022159Rab2b9040.206
ENSMUSG00000019173Rab5c8131.250ENSMUSG00000028945Rheb9331.250
ENSMUSG00000019173Rab5c9337.379ENSMUSG00000027739Rab33b8937.379
ENSMUSG00000019173Rab5c9441.379ENSMUSG00000032549Rab6b9841.379
ENSMUSG00000019173Rab5c7632.121ENSMUSG00000064147Rab446332.121
ENSMUSG00000019173Rab5c9840.845ENSMUSG00000020732Rab379540.845
ENSMUSG00000019173Rab5c7742.442ENSMUSG00000079477Rab79047.727
ENSMUSG00000019173Rab5c8937.113ENSMUSG00000029518Rab359637.436
ENSMUSG00000019173Rab5c7536.585ENSMUSG00000031202Rab39b7736.585
ENSMUSG00000019173Rab5c9038.974ENSMUSG00000047187Rab2a9238.974
ENSMUSG00000019173Rab5c8936.979ENSMUSG00000027935Rab139536.979
ENSMUSG00000019173Rab5c7135.948ENSMUSG00000022621Rabl26735.948
ENSMUSG00000019173Rab5c10087.500ENSMUSG00000017831Rab5a10087.500
ENSMUSG00000019173Rab5c9047.423ENSMUSG00000027519Rab22a9847.423
ENSMUSG00000019173Rab5c8639.785ENSMUSG00000026878Rab148739.785
ENSMUSG00000019173Rab5c8943.590ENSMUSG00000020149Rab1a9643.590
ENSMUSG00000019173Rab5c8330.000ENSMUSG00000027852Nras9933.333
ENSMUSG00000019173Rab5c8144.000ENSMUSG00000030704Rab6a8444.000
ENSMUSG00000019173Rab5c7331.875ENSMUSG00000002059Rab346533.077
ENSMUSG00000019173Rab5c8135.227ENSMUSG00000004768Rab237435.227
ENSMUSG00000019173Rab5c7832.544ENSMUSG00000030265Kras9830.102
ENSMUSG00000019173Rab5c5531.707ENSMUSG00000026426Arl8a6231.707
ENSMUSG00000019173Rab5c9786.124ENSMUSG00000000711Rab5b9786.124
ENSMUSG00000019173Rab5c9146.939ENSMUSG00000056515Rab319846.939
ENSMUSG00000019173Rab5c8935.859ENSMUSG00000043463Rab9b9735.859
ENSMUSG00000019173Rab5c8133.702ENSMUSG00000025499Hras9433.702
ENSMUSG00000019173Rab5c8936.318ENSMUSG00000031104Rab33a8536.318
ENSMUSG00000019173Rab5c9041.262ENSMUSG00000004771Rab11a8849.630
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000019173Rab5c10098.611ENSG00000108774RAB5C100100.000Homo_sapiens
ENSMUSG00000019173Rab5c9989.302ENSAPOG00000016864rab5c9891.628Acanthochromis_polyacanthus
ENSMUSG00000019173Rab5c10098.611ENSAMEG00000006003RAB5C10098.611Ailuropoda_melanoleuca
ENSMUSG00000019173Rab5c9988.889ENSACIG00000010896rab5c9890.741Amphilophus_citrinellus
ENSMUSG00000019173Rab5c9989.352ENSAOCG00000016614rab5c9891.667Amphiprion_ocellaris
ENSMUSG00000019173Rab5c9789.100ENSAPEG00000017868-9791.469Amphiprion_percula
ENSMUSG00000019173Rab5c10089.908ENSATEG00000001937rab5c10091.284Anabas_testudineus
ENSMUSG00000019173Rab5c9499.020ENSANAG00000025390RAB5C10099.020Aotus_nancymaae
ENSMUSG00000019173Rab5c9690.047ENSACLG00000008615-9989.498Astatotilapia_calliptera
ENSMUSG00000019173Rab5c9987.963ENSACLG00000002706rab5c9890.741Astatotilapia_calliptera
ENSMUSG00000019173Rab5c9689.048ENSAMXG00000037267-9991.429Astyanax_mexicanus
ENSMUSG00000019173Rab5c9989.862ENSAMXG00000043717rab5c9891.705Astyanax_mexicanus
ENSMUSG00000019173Rab5c10098.611ENSBTAG00000006982RAB5C10098.611Bos_taurus
ENSMUSG00000019173Rab5c9976.279WBGene00004268rab-59976.279Caenorhabditis_elegans
ENSMUSG00000019173Rab5c10098.148ENSCAFG00000015629RAB5C10098.148Canis_familiaris
ENSMUSG00000019173Rab5c10098.148ENSCAFG00020013537RAB5C10098.148Canis_lupus_dingo
ENSMUSG00000019173Rab5c10098.611ENSCHIG00000012960RAB5C10098.611Capra_hircus
ENSMUSG00000019173Rab5c10099.074ENSTSYG00000030531RAB5C10099.074Carlito_syrichta
ENSMUSG00000019173Rab5c10099.074ENSCCAG00000025940RAB5C10099.074Cebus_capucinus
ENSMUSG00000019173Rab5c10098.611ENSCATG00000040873RAB5C10098.611Cercocebus_atys
ENSMUSG00000019173Rab5c10097.685ENSCLAG00000016650RAB5C10097.685Chinchilla_lanigera
ENSMUSG00000019173Rab5c8299.438ENSCHOG00000009886RAB5C10099.438Choloepus_hoffmanni
ENSMUSG00000019173Rab5c9976.168ENSCING00000003340-9976.168Ciona_intestinalis
ENSMUSG00000019173Rab5c9974.545ENSCSAVG00000000613-9983.333Ciona_savignyi
ENSMUSG00000019173Rab5c10098.611ENSCGRG00001014226Rab5c10098.611Cricetulus_griseus_chok1gshd
ENSMUSG00000019173Rab5c10098.611ENSCGRG00000007534Rab5c10098.611Cricetulus_griseus_crigri
ENSMUSG00000019173Rab5c9991.204ENSCSEG00000017024rab5c9891.204Cynoglossus_semilaevis
ENSMUSG00000019173Rab5c9989.352ENSCVAG00000009550rab5c9891.204Cyprinodon_variegatus
ENSMUSG00000019173Rab5c10098.148ENSDNOG00000038853RAB5C10098.148Dasypus_novemcinctus
ENSMUSG00000019173Rab5c10098.148ENSDORG00000006819Rab5c10098.148Dipodomys_ordii
ENSMUSG00000019173Rab5c9974.648FBgn0014010Rab59574.648Drosophila_melanogaster
ENSMUSG00000019173Rab5c9979.535ENSEBUG00000014794rab5c10079.535Eptatretus_burgeri
ENSMUSG00000019173Rab5c10098.611ENSEASG00005009281RAB5C10098.611Equus_asinus_asinus
ENSMUSG00000019173Rab5c10099.074ENSECAG00000025054RAB5C10099.074Equus_caballus
ENSMUSG00000019173Rab5c10098.611ENSEEUG00000002790RAB5C10098.611Erinaceus_europaeus
ENSMUSG00000019173Rab5c9988.889ENSELUG00000010439-9888.889Esox_lucius
ENSMUSG00000019173Rab5c9987.963ENSELUG00000018516rab5c9990.278Esox_lucius
ENSMUSG00000019173Rab5c10098.611ENSFCAG00000002148RAB5C10098.611Felis_catus
ENSMUSG00000019173Rab5c10095.833ENSFDAG00000021541RAB5C10095.833Fukomys_damarensis
ENSMUSG00000019173Rab5c9991.705ENSFHEG00000015268-9991.705Fundulus_heteroclitus
ENSMUSG00000019173Rab5c9989.352ENSFHEG00000012117rab5c9891.204Fundulus_heteroclitus
ENSMUSG00000019173Rab5c9987.963ENSGMOG00000015096rab5c9890.741Gadus_morhua
ENSMUSG00000019173Rab5c7888.166ENSGMOG00000001876-9888.166Gadus_morhua
ENSMUSG00000019173Rab5c9989.815ENSGAFG00000000884rab5c9891.667Gambusia_affinis
ENSMUSG00000019173Rab5c9691.905ENSGAFG00000003642-9989.091Gambusia_affinis
ENSMUSG00000019173Rab5c8794.681ENSGACG00000008659rab5c9887.037Gasterosteus_aculeatus
ENSMUSG00000019173Rab5c10098.611ENSGGOG00000005472RAB5C10098.611Gorilla_gorilla
ENSMUSG00000019173Rab5c9987.963ENSHBUG00000002014rab5c9890.741Haplochromis_burtoni
ENSMUSG00000019173Rab5c9690.047ENSHBUG00000006823-9989.498Haplochromis_burtoni
ENSMUSG00000019173Rab5c10095.370ENSHGLG00000012067RAB5C10095.370Heterocephalus_glaber_female
ENSMUSG00000019173Rab5c9989.862ENSHCOG00000004662rab5c9791.244Hippocampus_comes
ENSMUSG00000019173Rab5c9782.547ENSHCOG00000020238-10080.909Hippocampus_comes
ENSMUSG00000019173Rab5c9687.619ENSIPUG00000020082rab5c9888.532Ictalurus_punctatus
ENSMUSG00000019173Rab5c10099.074ENSSTOG00000006620RAB5C10099.074Ictidomys_tridecemlineatus
ENSMUSG00000019173Rab5c10098.611ENSJJAG00000021181Rab5c10098.611Jaculus_jaculus
ENSMUSG00000019173Rab5c9988.889ENSKMAG00000020038rab5c9891.204Kryptolebias_marmoratus
ENSMUSG00000019173Rab5c9988.940ENSKMAG00000017417-9988.940Kryptolebias_marmoratus
ENSMUSG00000019173Rab5c10088.532ENSLBEG00000010408-9988.532Labrus_bergylta
ENSMUSG00000019173Rab5c9990.278ENSLBEG00000004128rab5c9892.130Labrus_bergylta
ENSMUSG00000019173Rab5c9994.393ENSLOCG00000012566rab5c10094.393Lepisosteus_oculatus
ENSMUSG00000019173Rab5c10098.611ENSMFAG00000039627RAB5C10098.611Macaca_fascicularis
ENSMUSG00000019173Rab5c10098.611ENSMNEG00000000355RAB5C10098.611Macaca_nemestrina
ENSMUSG00000019173Rab5c9988.426ENSMAMG00000022322rab5c9890.741Mastacembelus_armatus
ENSMUSG00000019173Rab5c9988.940ENSMAMG00000016207-9988.940Mastacembelus_armatus
ENSMUSG00000019173Rab5c9690.047ENSMZEG00005021090-9989.498Maylandia_zebra
ENSMUSG00000019173Rab5c9987.963ENSMZEG00005022735rab5c9890.741Maylandia_zebra
ENSMUSG00000019173Rab5c10099.537ENSMAUG00000015005Rab5c10099.537Mesocricetus_auratus
ENSMUSG00000019173Rab5c10098.611ENSMICG00000041608RAB5C10098.611Microcebus_murinus
ENSMUSG00000019173Rab5c10098.611ENSMOCG00000018531-10098.611Microtus_ochrogaster
ENSMUSG00000019173Rab5c10089.908ENSMMOG00000020621rab5c9989.908Mola_mola
ENSMUSG00000019173Rab5c9988.073ENSMALG00000022348-9988.073Monopterus_albus
ENSMUSG00000019173Rab5c9784.360ENSMALG00000006052rab5c9684.186Monopterus_albus
ENSMUSG00000019173Rab5c100100.000MGP_CAROLIEiJ_G0017184Rab5c100100.000Mus_caroli
ENSMUSG00000019173Rab5c100100.000MGP_PahariEiJ_G0018314Rab5c100100.000Mus_pahari
ENSMUSG00000019173Rab5c100100.000MGP_SPRETEiJ_G0018027Rab5c100100.000Mus_spretus
ENSMUSG00000019173Rab5c10098.611ENSMPUG00000010554RAB5C10098.611Mustela_putorius_furo
ENSMUSG00000019173Rab5c10097.685ENSNGAG00000010286Rab5c10097.685Nannospalax_galili
ENSMUSG00000019173Rab5c9988.889ENSNBRG00000018165rab5c9891.667Neolamprologus_brichardi
ENSMUSG00000019173Rab5c9690.047ENSNBRG00000016922-9989.498Neolamprologus_brichardi
ENSMUSG00000019173Rab5c8292.697ENSOPRG00000008255RAB5C10092.697Ochotona_princeps
ENSMUSG00000019173Rab5c10097.222ENSODEG00000017920RAB5C10097.222Octodon_degus
ENSMUSG00000019173Rab5c9988.889ENSONIG00000001113rab5c9892.130Oreochromis_niloticus
ENSMUSG00000019173Rab5c10088.532ENSORLG00000003882rab5c10089.908Oryzias_latipes
ENSMUSG00000019173Rab5c10089.450ENSORLG00020008388rab5c10089.450Oryzias_latipes_hni
ENSMUSG00000019173Rab5c10088.532ENSORLG00015021900rab5c10089.908Oryzias_latipes_hsok
ENSMUSG00000019173Rab5c10088.532ENSOMEG00000023078rab5c10089.908Oryzias_melastigma
ENSMUSG00000019173Rab5c10098.611ENSOGAG00000009456RAB5C10098.611Otolemur_garnettii
ENSMUSG00000019173Rab5c10098.611ENSOARG00000018768RAB5C10098.611Ovis_aries
ENSMUSG00000019173Rab5c10098.611ENSPPAG00000037206RAB5C10098.611Pan_paniscus
ENSMUSG00000019173Rab5c10098.611ENSPPRG00000005745RAB5C10098.611Panthera_pardus
ENSMUSG00000019173Rab5c10098.611ENSPTIG00000008177RAB5C10098.611Panthera_tigris_altaica
ENSMUSG00000019173Rab5c10098.611ENSPTRG00000009194RAB5C10098.611Pan_troglodytes
ENSMUSG00000019173Rab5c9987.963ENSPKIG00000020112-9987.963Paramormyrops_kingsleyae
ENSMUSG00000019173Rab5c9989.767ENSPKIG00000001237-9989.767Paramormyrops_kingsleyae
ENSMUSG00000019173Rab5c9986.574ENSPMGG00000010792rab5c9790.521Periophthalmus_magnuspinnatus
ENSMUSG00000019173Rab5c10098.611ENSPEMG00000017971Rab5c10098.611Peromyscus_maniculatus_bairdii
ENSMUSG00000019173Rab5c9978.829ENSPMAG00000000008rab5c10078.829Petromyzon_marinus
ENSMUSG00000019173Rab5c9978.605ENSPMAG00000007867rab5c10078.605Petromyzon_marinus
ENSMUSG00000019173Rab5c9979.535ENSPMAG00000001399rab5c10079.535Petromyzon_marinus
ENSMUSG00000019173Rab5c10096.759ENSPCIG00000020225-10096.759Phascolarctos_cinereus
ENSMUSG00000019173Rab5c9989.815ENSPLAG00000004790rab5c9891.667Poecilia_latipinna
ENSMUSG00000019173Rab5c9990.783ENSPLAG00000016333-9990.783Poecilia_latipinna
ENSMUSG00000019173Rab5c9888.732ENSPMEG00000012614-9889.498Poecilia_mexicana
ENSMUSG00000019173Rab5c9989.815ENSPMEG00000011336rab5c9891.667Poecilia_mexicana
ENSMUSG00000019173Rab5c8792.593ENSPREG00000022167-8993.989Poecilia_reticulata
ENSMUSG00000019173Rab5c9989.815ENSPREG00000010146rab5c9891.667Poecilia_reticulata
ENSMUSG00000019173Rab5c10098.611ENSPPYG00000008398RAB5C10098.611Pongo_abelii
ENSMUSG00000019173Rab5c10097.685ENSPCAG00000016412RAB5C10097.685Procavia_capensis
ENSMUSG00000019173Rab5c10097.685ENSPCOG00000026327RAB5C10097.685Propithecus_coquereli
ENSMUSG00000019173Rab5c10099.074ENSPVAG00000003867RAB5C10099.074Pteropus_vampyrus
ENSMUSG00000019173Rab5c9690.047ENSPNYG00000015851-9989.498Pundamilia_nyererei
ENSMUSG00000019173Rab5c9987.963ENSPNYG00000010615rab5c9890.741Pundamilia_nyererei
ENSMUSG00000019173Rab5c9787.264ENSPNAG00000002218-9989.623Pygocentrus_nattereri
ENSMUSG00000019173Rab5c9991.244ENSPNAG00000028138rab5c9891.244Pygocentrus_nattereri
ENSMUSG00000019173Rab5c10099.537ENSRNOG00000018568Rab5c10099.537Rattus_norvegicus
ENSMUSG00000019173Rab5c10098.611ENSRBIG00000031376RAB5C10098.611Rhinopithecus_bieti
ENSMUSG00000019173Rab5c10098.611ENSRROG00000032895RAB5C10098.611Rhinopithecus_roxellana
ENSMUSG00000019173Rab5c10099.074ENSSBOG00000032552-10099.074Saimiri_boliviensis_boliviensis
ENSMUSG00000019173Rab5c10097.222ENSSHAG00000005267-10097.222Sarcophilus_harrisii
ENSMUSG00000019173Rab5c9987.558ENSSFOG00015009988-9987.558Scleropages_formosus
ENSMUSG00000019173Rab5c9692.308ENSSMAG00000007323rab5c9890.278Scophthalmus_maximus
ENSMUSG00000019173Rab5c9991.667ENSSDUG00000023008rab5c9891.667Seriola_dumerili
ENSMUSG00000019173Rab5c9991.204ENSSLDG00000017771rab5c9891.204Seriola_lalandi_dorsalis
ENSMUSG00000019173Rab5c10095.833ENSSPUG00000012950-10095.833Sphenodon_punctatus
ENSMUSG00000019173Rab5c9989.815ENSSPAG00000006436rab5c9892.593Stegastes_partitus
ENSMUSG00000019173Rab5c10098.611ENSSSCG00000032467RAB5C10098.611Sus_scrofa
ENSMUSG00000019173Rab5c9987.963ENSTRUG00000015590rab5c9890.278Takifugu_rubripes
ENSMUSG00000019173Rab5c9690.909ENSTNIG00000011711rab5c9590.909Tetraodon_nigroviridis
ENSMUSG00000019173Rab5c10098.611ENSTBEG00000007092RAB5C10098.611Tupaia_belangeri
ENSMUSG00000019173Rab5c10097.685ENSTTRG00000006673RAB5C10097.685Tursiops_truncatus
ENSMUSG00000019173Rab5c10098.611ENSUAMG00000024343RAB5C10098.611Ursus_americanus
ENSMUSG00000019173Rab5c10098.611ENSUMAG00000023270RAB5C10098.611Ursus_maritimus
ENSMUSG00000019173Rab5c9692.381ENSXCOG00000006300-9989.140Xiphophorus_couchianus
ENSMUSG00000019173Rab5c9989.352ENSXCOG00000016788rab5c9891.667Xiphophorus_couchianus
ENSMUSG00000019173Rab5c9991.244ENSXMAG00000022179-9991.244Xiphophorus_maculatus
ENSMUSG00000019173Rab5c9989.815ENSXMAG00000003266rab5c9891.667Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0003924GTPase activity21873635.IBAFunction
GO:0003924GTPase activity-ISOFunction
GO:0003924GTPase activity7789520.TASFunction
GO:0005515protein binding20534488.IPIFunction
GO:0005525GTP binding-IEAFunction
GO:0005768endosome21873635.IBAComponent
GO:0005768endosome-ISOComponent
GO:0005769early endosome21873635.IBAComponent
GO:0005811lipid droplet-ISOComponent
GO:0005886plasma membrane21873635.IBAComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0007032endosome organization7789520.IDAProcess
GO:0015031protein transport-IEAProcess
GO:0016020membrane-IEAComponent
GO:0019003GDP binding-ISOFunction
GO:0030100regulation of endocytosis21873635.IBAProcess
GO:0030100regulation of endocytosis7789520.IDAProcess
GO:0030139endocytic vesicle21873635.IBAComponent
GO:0030139endocytic vesicle7789520.IDAComponent
GO:0031410cytoplasmic vesicle-ISOComponent
GO:0032482Rab protein signal transduction21873635.IBAProcess
GO:0048227plasma membrane to endosome transport-ISOProcess
GO:0098993anchored component of synaptic vesicle membrane-ISOComponent

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