EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000019738 (Gene tree)
Gene ID: 69920
Gene Symbol: Polr2i
Alias: 2810002B19Rik
Full Name: polymerase (RNA) II (DNA directed) polypeptide I
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 1443 bases
Position: chr7:30231948-30233390
Accession: 1917170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000019882	RNA_POL_M_15KD	PF02150.16	1.6e-16	1	1
ENSMUSP00000103828	RNA_POL_M_15KD	PF02150.16	3.2e-09	1	1
ENSMUSP00000116741	RNA_POL_M_15KD	PF02150.16	5.7e-09	1	1
ENSMUSP00000103827	RNA_POL_M_15KD	PF02150.16	1.1e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000150841	-	451	-	-	- (aa)	-	-
ENSMUST00000138886	-	285	-	-	- (aa)	-	-
ENSMUST00000138118	-	435	-	-	- (aa)	-	-
ENSMUST00000145559	-	578	-	-	- (aa)	-	-
ENSMUST00000149654	-	604	-	ENSMUSP00000116741	83 (aa)	-	D3Z3Z8
ENSMUST00000019882	-	819	-	ENSMUSP00000019882	125 (aa)	-	P60898
ENSMUST00000108192	-	508	-	ENSMUSP00000103827	103 (aa)	-	D3YYI3
ENSMUST00000108193	-	488	-	ENSMUSP00000103828	123 (aa)	-	D3YYI2

Gene Model

Click here to download ENSMUSG00000019738's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03020	RNA polymerase	KEGG
mmu05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000019738's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000019738	Polr2i	74	32.143	ENSMUSG00000038628	Polr3k	77	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000019738	Polr2i	100	100.000	ENSG00000105258	POLR2I	100	100.000	Homo_sapiens
ENSMUSG00000019738	Polr2i	100	97.087	ENSAPOG00000012409	polr2i	96	96.694	Acanthochromis_polyacanthus
ENSMUSG00000019738	Polr2i	100	100.000	ENSAMEG00000000993	POLR2I	100	100.000	Ailuropoda_melanoleuca
ENSMUSG00000019738	Polr2i	100	97.087	ENSAOCG00000024378	polr2i	96	96.694	Amphiprion_ocellaris
ENSMUSG00000019738	Polr2i	100	97.087	ENSAPEG00000021748	polr2i	96	96.694	Amphiprion_percula
ENSMUSG00000019738	Polr2i	100	96.117	ENSATEG00000000758	polr2i	96	96.694	Anabas_testudineus
ENSMUSG00000019738	Polr2i	100	100.000	ENSANAG00000035318	POLR2I	100	100.000	Aotus_nancymaae
ENSMUSG00000019738	Polr2i	100	97.087	ENSACLG00000001663	polr2i	96	97.521	Astatotilapia_calliptera
ENSMUSG00000019738	Polr2i	100	97.087	ENSAMXG00000030198	polr2i	96	97.521	Astyanax_mexicanus
ENSMUSG00000019738	Polr2i	100	100.000	ENSBTAG00000015002	POLR2I	100	100.000	Bos_taurus
ENSMUSG00000019738	Polr2i	100	61.165	WBGene00022400	rpb-9	74	62.097	Caenorhabditis_elegans
ENSMUSG00000019738	Polr2i	100	100.000	ENSCJAG00000009671	POLR2I	100	100.000	Callithrix_jacchus
ENSMUSG00000019738	Polr2i	100	100.000	ENSCAFG00000006601	POLR2I	100	100.000	Canis_familiaris
ENSMUSG00000019738	Polr2i	100	100.000	ENSCAFG00020018113	POLR2I	100	100.000	Canis_lupus_dingo
ENSMUSG00000019738	Polr2i	100	100.000	ENSCHIG00000011961	POLR2I	100	100.000	Capra_hircus
ENSMUSG00000019738	Polr2i	100	100.000	ENSTSYG00000028318	-	100	100.000	Carlito_syrichta
ENSMUSG00000019738	Polr2i	100	69.903	ENSTSYG00000031752	-	95	69.903	Carlito_syrichta
ENSMUSG00000019738	Polr2i	100	100.000	ENSCPOG00000012097	POLR2I	100	100.000	Cavia_porcellus
ENSMUSG00000019738	Polr2i	100	100.000	ENSCCAG00000022138	-	100	100.000	Cebus_capucinus
ENSMUSG00000019738	Polr2i	100	98.400	ENSCCAG00000032214	-	100	98.400	Cebus_capucinus
ENSMUSG00000019738	Polr2i	100	100.000	ENSCATG00000017413	POLR2I	100	100.000	Cercocebus_atys
ENSMUSG00000019738	Polr2i	100	100.000	ENSCLAG00000011800	POLR2I	100	100.000	Chinchilla_lanigera
ENSMUSG00000019738	Polr2i	100	100.000	ENSCSAG00000004254	POLR2I	100	100.000	Chlorocebus_sabaeus
ENSMUSG00000019738	Polr2i	100	100.000	ENSCPBG00000006726	POLR2I	100	99.200	Chrysemys_picta_bellii
ENSMUSG00000019738	Polr2i	100	80.723	ENSCSAVG00000010630	-	93	80.342	Ciona_savignyi
ENSMUSG00000019738	Polr2i	100	100.000	ENSCANG00000031951	POLR2I	100	100.000	Colobus_angolensis_palliatus
ENSMUSG00000019738	Polr2i	100	96.117	ENSCSEG00000002213	polr2i	96	95.041	Cynoglossus_semilaevis
ENSMUSG00000019738	Polr2i	100	95.146	ENSCVAG00000014797	polr2i	96	95.041	Cyprinodon_variegatus
ENSMUSG00000019738	Polr2i	100	96.117	ENSDARG00000040443	polr2i	96	95.868	Danio_rerio
ENSMUSG00000019738	Polr2i	100	100.000	ENSDNOG00000015842	POLR2I	100	100.000	Dasypus_novemcinctus
ENSMUSG00000019738	Polr2i	100	75.904	ENSDORG00000028728	-	95	76.577	Dipodomys_ordii
ENSMUSG00000019738	Polr2i	100	75.904	ENSDORG00000029259	-	95	78.070	Dipodomys_ordii
ENSMUSG00000019738	Polr2i	100	100.000	ENSDORG00000001852	-	100	100.000	Dipodomys_ordii
ENSMUSG00000019738	Polr2i	100	75.904	ENSDORG00000028026	-	99	76.042	Dipodomys_ordii
ENSMUSG00000019738	Polr2i	100	77.108	FBgn0004855	RpII15	91	78.632	Drosophila_melanogaster
ENSMUSG00000019738	Polr2i	100	100.000	ENSETEG00000012679	POLR2I	100	100.000	Echinops_telfairi
ENSMUSG00000019738	Polr2i	100	95.146	ENSEBUG00000007333	polr2i	100	95.146	Eptatretus_burgeri
ENSMUSG00000019738	Polr2i	100	100.000	ENSEASG00005002231	POLR2I	100	100.000	Equus_asinus_asinus
ENSMUSG00000019738	Polr2i	100	100.000	ENSECAG00000013654	POLR2I	100	100.000	Equus_caballus
ENSMUSG00000019738	Polr2i	100	100.000	ENSEEUG00000002113	POLR2I	100	100.000	Erinaceus_europaeus
ENSMUSG00000019738	Polr2i	100	97.087	ENSELUG00000018012	polr2i	96	97.521	Esox_lucius
ENSMUSG00000019738	Polr2i	100	100.000	ENSFCAG00000026052	POLR2I	100	100.000	Felis_catus
ENSMUSG00000019738	Polr2i	50	92.063	ENSFALG00000006198	POLR2I	100	92.063	Ficedula_albicollis
ENSMUSG00000019738	Polr2i	100	100.000	ENSFDAG00000011350	POLR2I	100	100.000	Fukomys_damarensis
ENSMUSG00000019738	Polr2i	100	96.117	ENSFHEG00000015659	polr2i	96	94.215	Fundulus_heteroclitus
ENSMUSG00000019738	Polr2i	100	97.087	ENSGMOG00000013806	polr2i	96	97.521	Gadus_morhua
ENSMUSG00000019738	Polr2i	100	97.087	ENSGALG00000038595	POLR2I	96	94.400	Gallus_gallus
ENSMUSG00000019738	Polr2i	100	96.117	ENSGAFG00000001037	polr2i	96	96.694	Gambusia_affinis
ENSMUSG00000019738	Polr2i	100	97.087	ENSGACG00000006679	polr2i	98	96.000	Gasterosteus_aculeatus
ENSMUSG00000019738	Polr2i	100	100.000	ENSGAGG00000015806	POLR2I	100	99.200	Gopherus_agassizii
ENSMUSG00000019738	Polr2i	100	100.000	ENSGGOG00000015426	POLR2I	100	100.000	Gorilla_gorilla
ENSMUSG00000019738	Polr2i	100	97.087	ENSHBUG00000004140	polr2i	100	96.032	Haplochromis_burtoni
ENSMUSG00000019738	Polr2i	100	100.000	ENSHGLG00000007388	POLR2I	100	100.000	Heterocephalus_glaber_female
ENSMUSG00000019738	Polr2i	100	100.000	ENSHGLG00100014515	POLR2I	100	100.000	Heterocephalus_glaber_male
ENSMUSG00000019738	Polr2i	100	97.087	ENSHCOG00000010967	polr2i	96	97.521	Hippocampus_comes
ENSMUSG00000019738	Polr2i	100	97.087	ENSIPUG00000001127	polr2i	96	95.868	Ictalurus_punctatus
ENSMUSG00000019738	Polr2i	100	100.000	ENSSTOG00000009411	POLR2I	100	100.000	Ictidomys_tridecemlineatus
ENSMUSG00000019738	Polr2i	100	100.000	ENSJJAG00000014400	Polr2i	100	100.000	Jaculus_jaculus
ENSMUSG00000019738	Polr2i	100	96.117	ENSKMAG00000001567	polr2i	96	96.694	Kryptolebias_marmoratus
ENSMUSG00000019738	Polr2i	100	97.087	ENSLBEG00000001220	polr2i	96	97.521	Labrus_bergylta
ENSMUSG00000019738	Polr2i	80	98.485	ENSLBEG00000028538	-	94	98.810	Labrus_bergylta
ENSMUSG00000019738	Polr2i	100	99.029	ENSLACG00000009590	POLR2I	100	95.200	Latimeria_chalumnae
ENSMUSG00000019738	Polr2i	100	97.087	ENSLOCG00000014818	polr2i	96	97.521	Lepisosteus_oculatus
ENSMUSG00000019738	Polr2i	100	100.000	ENSLAFG00000015527	POLR2I	100	100.000	Loxodonta_africana
ENSMUSG00000019738	Polr2i	100	100.000	ENSMFAG00000039443	POLR2I	100	100.000	Macaca_fascicularis
ENSMUSG00000019738	Polr2i	100	100.000	ENSMMUG00000000522	POLR2I	100	100.000	Macaca_mulatta
ENSMUSG00000019738	Polr2i	100	100.000	ENSMNEG00000029421	POLR2I	100	99.200	Macaca_nemestrina
ENSMUSG00000019738	Polr2i	100	100.000	ENSMLEG00000039720	POLR2I	100	100.000	Mandrillus_leucophaeus
ENSMUSG00000019738	Polr2i	100	96.117	ENSMAMG00000013970	polr2i	96	95.868	Mastacembelus_armatus
ENSMUSG00000019738	Polr2i	100	97.087	ENSMZEG00005013082	polr2i	96	97.521	Maylandia_zebra
ENSMUSG00000019738	Polr2i	100	97.087	ENSMGAG00000008576	POLR2I	100	94.400	Meleagris_gallopavo
ENSMUSG00000019738	Polr2i	100	100.000	ENSMAUG00000001001	Polr2i	100	100.000	Mesocricetus_auratus
ENSMUSG00000019738	Polr2i	100	100.000	ENSMICG00000010241	POLR2I	100	100.000	Microcebus_murinus
ENSMUSG00000019738	Polr2i	100	100.000	ENSMOCG00000011984	Polr2i	100	100.000	Microtus_ochrogaster
ENSMUSG00000019738	Polr2i	100	97.087	ENSMMOG00000004945	polr2i	100	97.087	Mola_mola
ENSMUSG00000019738	Polr2i	100	100.000	ENSMODG00000014172	POLR2I	100	100.000	Monodelphis_domestica
ENSMUSG00000019738	Polr2i	100	100.000	MGP_CAROLIEiJ_G0029507	Polr2i	100	100.000	Mus_caroli
ENSMUSG00000019738	Polr2i	100	100.000	MGP_PahariEiJ_G0012741	Polr2i	100	100.000	Mus_pahari
ENSMUSG00000019738	Polr2i	100	100.000	MGP_SPRETEiJ_G0030603	Polr2i	100	100.000	Mus_spretus
ENSMUSG00000019738	Polr2i	100	100.000	ENSMPUG00000005702	POLR2I	100	100.000	Mustela_putorius_furo
ENSMUSG00000019738	Polr2i	100	100.000	ENSMLUG00000012317	POLR2I	100	100.000	Myotis_lucifugus
ENSMUSG00000019738	Polr2i	100	100.000	ENSNGAG00000014966	Polr2i	100	100.000	Nannospalax_galili
ENSMUSG00000019738	Polr2i	100	97.087	ENSNBRG00000000723	polr2i	96	96.694	Neolamprologus_brichardi
ENSMUSG00000019738	Polr2i	100	100.000	ENSNLEG00000011691	POLR2I	100	100.000	Nomascus_leucogenys
ENSMUSG00000019738	Polr2i	100	100.000	ENSOPRG00000001789	-	100	99.200	Ochotona_princeps
ENSMUSG00000019738	Polr2i	100	100.000	ENSOPRG00000008681	-	100	98.400	Ochotona_princeps
ENSMUSG00000019738	Polr2i	100	83.133	ENSODEG00000017901	-	88	82.759	Octodon_degus
ENSMUSG00000019738	Polr2i	100	100.000	ENSODEG00000015015	-	100	100.000	Octodon_degus
ENSMUSG00000019738	Polr2i	100	97.087	ENSONIG00000005397	polr2i	96	97.521	Oreochromis_niloticus
ENSMUSG00000019738	Polr2i	100	100.000	ENSOCUG00000013044	POLR2I	100	100.000	Oryctolagus_cuniculus
ENSMUSG00000019738	Polr2i	100	99.029	ENSOCUG00000024998	-	100	97.600	Oryctolagus_cuniculus
ENSMUSG00000019738	Polr2i	100	96.117	ENSORLG00000013308	polr2i	96	95.868	Oryzias_latipes
ENSMUSG00000019738	Polr2i	100	96.117	ENSORLG00020011281	polr2i	96	95.868	Oryzias_latipes_hni
ENSMUSG00000019738	Polr2i	100	96.117	ENSORLG00015019529	polr2i	96	95.868	Oryzias_latipes_hsok
ENSMUSG00000019738	Polr2i	100	96.117	ENSOMEG00000012586	polr2i	96	95.868	Oryzias_melastigma
ENSMUSG00000019738	Polr2i	100	100.000	ENSOGAG00000024254	POLR2I	100	100.000	Otolemur_garnettii
ENSMUSG00000019738	Polr2i	100	100.000	ENSOARG00000005266	POLR2I	100	100.000	Ovis_aries
ENSMUSG00000019738	Polr2i	100	100.000	ENSPPAG00000033446	POLR2I	100	100.000	Pan_paniscus
ENSMUSG00000019738	Polr2i	100	100.000	ENSPPRG00000007194	POLR2I	100	100.000	Panthera_pardus
ENSMUSG00000019738	Polr2i	100	100.000	ENSPTIG00000018661	POLR2I	100	100.000	Panthera_tigris_altaica
ENSMUSG00000019738	Polr2i	100	100.000	ENSPTRG00000010885	POLR2I	100	100.000	Pan_troglodytes
ENSMUSG00000019738	Polr2i	100	100.000	ENSPANG00000004508	POLR2I	100	100.000	Papio_anubis
ENSMUSG00000019738	Polr2i	100	97.087	ENSPKIG00000001086	polr2i	96	97.521	Paramormyrops_kingsleyae
ENSMUSG00000019738	Polr2i	100	100.000	ENSPSIG00000011560	POLR2I	100	100.000	Pelodiscus_sinensis
ENSMUSG00000019738	Polr2i	100	97.087	ENSPMGG00000016154	polr2i	96	92.000	Periophthalmus_magnuspinnatus
ENSMUSG00000019738	Polr2i	100	100.000	ENSPEMG00000014212	Polr2i	100	100.000	Peromyscus_maniculatus_bairdii
ENSMUSG00000019738	Polr2i	100	100.000	ENSPCIG00000015436	-	100	100.000	Phascolarctos_cinereus
ENSMUSG00000019738	Polr2i	100	96.117	ENSPFOG00000016816	polr2i	96	96.694	Poecilia_formosa
ENSMUSG00000019738	Polr2i	100	96.117	ENSPLAG00000010639	polr2i	96	96.694	Poecilia_latipinna
ENSMUSG00000019738	Polr2i	100	96.117	ENSPMEG00000005956	polr2i	96	96.694	Poecilia_mexicana
ENSMUSG00000019738	Polr2i	100	96.117	ENSPREG00000004227	polr2i	96	96.694	Poecilia_reticulata
ENSMUSG00000019738	Polr2i	100	100.000	ENSPPYG00000009897	POLR2I	100	100.000	Pongo_abelii
ENSMUSG00000019738	Polr2i	100	100.000	ENSPCAG00000003494	POLR2I	100	100.000	Procavia_capensis
ENSMUSG00000019738	Polr2i	100	100.000	ENSPCOG00000018643	POLR2I	100	100.000	Propithecus_coquereli
ENSMUSG00000019738	Polr2i	100	100.000	ENSPVAG00000012883	POLR2I	100	100.000	Pteropus_vampyrus
ENSMUSG00000019738	Polr2i	100	97.087	ENSPNYG00000011908	polr2i	96	97.521	Pundamilia_nyererei
ENSMUSG00000019738	Polr2i	100	97.087	ENSPNAG00000005859	polr2i	96	97.521	Pygocentrus_nattereri
ENSMUSG00000019738	Polr2i	100	100.000	ENSRNOG00000020799	LOC103690054	100	100.000	Rattus_norvegicus
ENSMUSG00000019738	Polr2i	100	100.000	ENSRNOG00000050560	Polr2i	100	100.000	Rattus_norvegicus
ENSMUSG00000019738	Polr2i	100	100.000	ENSRBIG00000037225	POLR2I	100	100.000	Rhinopithecus_bieti
ENSMUSG00000019738	Polr2i	100	100.000	ENSRROG00000042843	POLR2I	100	100.000	Rhinopithecus_roxellana
ENSMUSG00000019738	Polr2i	100	44.578	YGL070C	RPB9	89	45.045	Saccharomyces_cerevisiae
ENSMUSG00000019738	Polr2i	100	78.641	ENSSBOG00000022998	-	74	78.400	Saimiri_boliviensis_boliviensis
ENSMUSG00000019738	Polr2i	100	100.000	ENSSBOG00000030799	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSMUSG00000019738	Polr2i	100	97.087	ENSSFOG00015022523	polr2i	96	97.521	Scleropages_formosus
ENSMUSG00000019738	Polr2i	100	96.117	ENSSMAG00000003335	polr2i	96	96.694	Scophthalmus_maximus
ENSMUSG00000019738	Polr2i	100	96.117	ENSSDUG00000005483	polr2i	96	96.694	Seriola_dumerili
ENSMUSG00000019738	Polr2i	100	96.117	ENSSLDG00000009341	polr2i	96	96.694	Seriola_lalandi_dorsalis
ENSMUSG00000019738	Polr2i	100	100.000	ENSSARG00000009331	POLR2I	100	100.000	Sorex_araneus
ENSMUSG00000019738	Polr2i	100	100.000	ENSSPUG00000012658	POLR2I	100	97.600	Sphenodon_punctatus
ENSMUSG00000019738	Polr2i	100	97.087	ENSSPAG00000015734	polr2i	96	97.521	Stegastes_partitus
ENSMUSG00000019738	Polr2i	100	100.000	ENSSSCG00000039196	POLR2I	100	100.000	Sus_scrofa
ENSMUSG00000019738	Polr2i	100	97.087	ENSTRUG00000022235	polr2i	96	97.521	Takifugu_rubripes
ENSMUSG00000019738	Polr2i	100	97.087	ENSTNIG00000011737	polr2i	96	97.521	Tetraodon_nigroviridis
ENSMUSG00000019738	Polr2i	100	100.000	ENSTTRG00000003919	POLR2I	100	100.000	Tursiops_truncatus
ENSMUSG00000019738	Polr2i	100	100.000	ENSUAMG00000020575	POLR2I	100	100.000	Ursus_americanus
ENSMUSG00000019738	Polr2i	100	100.000	ENSUMAG00000020809	POLR2I	100	100.000	Ursus_maritimus
ENSMUSG00000019738	Polr2i	100	100.000	ENSVVUG00000013588	POLR2I	100	100.000	Vulpes_vulpes
ENSMUSG00000019738	Polr2i	100	96.117	ENSXCOG00000001119	polr2i	96	96.694	Xiphophorus_couchianus
ENSMUSG00000019738	Polr2i	100	96.117	ENSXMAG00000021278	polr2i	96	96.694	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001193	maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005665	RNA polymerase II, core complex	-	ISO	Component
GO:0006283	transcription-coupled nucleotide-excision repair	21873635.	IBA	Process
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0006366	transcription by RNA polymerase II	-	ISO	Process
GO:0006367	transcription initiation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0006379	mRNA cleavage	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function