EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000019790 (Gene tree)
Gene ID: 78808
Gene Symbol: Stxbp5
Alias: 0710001E20Rik|4930565N16Rik|LGL3|tomosyn 1
Full Name: syntaxin binding protein 5 (tomosyn)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 145533
Position: chr10: 9755547-9901079
Accession: 1926058
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000148009	-	287	-	-	- (aa)	-	-
ENSMUST00000128487	-	637	-	-	- (aa)	-	-
ENSMUST00000136324	-	791	-	ENSMUSP00000123355	263 (aa)	-	F6WXQ4
ENSMUST00000139199	-	950	-	-	- (aa)	-	-
ENSMUST00000141722	-	4702	-	ENSMUSP00000123253	1116 (aa)	-	D3Z079
ENSMUST00000151435	-	2364	-	-	- (aa)	-	-
ENSMUST00000136259	-	3791	-	-	- (aa)	-	-
ENSMUST00000038213	-	8825	XM_006512926	ENSMUSP00000044535	1152 (aa)	XP_006512989	Q8K400
ENSMUST00000125200	-	3300	XM_006512928	ENSMUSP00000121507	1099 (aa)	XP_006512991	D3Z2Q2
ENSMUST00000139779	-	440	-	-	- (aa)	-	-
ENSMUST00000131828	-	1518	-	-	- (aa)	-	-
ENSMUST00000219200	-	3870	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000019790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000019790's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005096	GTPase activator activity	21873635.	IBA	Function
GO:0005515	protein binding	12832401.	IPI	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	21873635.	IBA	Component
GO:0005892	acetylcholine-gated channel complex	12832401.	IDA	Component
GO:0006887	exocytosis	12832401.	IDA	Process
GO:0007409	axonogenesis	16787939.	TAS	Process
GO:0008021	synaptic vesicle	-	ISO	Component
GO:0010807	regulation of synaptic vesicle priming	18936251.	IDA	Process
GO:0010807	regulation of synaptic vesicle priming	18936251.	IMP	Process
GO:0015031	protein transport	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016192	vesicle-mediated transport	-	IEA	Process
GO:0017075	syntaxin-1 binding	16787939.	IDA	Function
GO:0017075	syntaxin-1 binding	12832401.	IPI	Function
GO:0017075	syntaxin-1 binding	-	ISO	Function
GO:0017137	Rab GTPase binding	21873635.	IBA	Function
GO:0017157	regulation of exocytosis	21873635.	IBA	Process
GO:0017157	regulation of exocytosis	21330375.	IDA	Process
GO:0019905	syntaxin binding	21873635.	IBA	Function
GO:0019905	syntaxin binding	12832401.	IPI	Function
GO:0030141	secretory granule	16787939.	NAS	Component
GO:0031201	SNARE complex	21873635.	IBA	Component
GO:0031594	neuromuscular junction	-	ISO	Component
GO:0045921	positive regulation of exocytosis	16787939.	IDA	Process
GO:0098674	extrinsic component of neuronal dense core vesicle membrane	28746398.	EXP	Component
GO:0098674	extrinsic component of neuronal dense core vesicle membrane	28746398.	IDA	Component
GO:0098685	Schaffer collateral - CA1 synapse	-	ISO	Component
GO:0098686	hippocampal mossy fiber to CA3 synapse	18936251.	IDA	Component
GO:0098686	hippocampal mossy fiber to CA3 synapse	18936251.	IMP	Component
GO:0098793	presynapse	28746398.	IDA	Component
GO:0098888	extrinsic component of presynaptic membrane	-	ISO	Component
GO:0099504	synaptic vesicle cycle	-	ISO	Process
GO:0099523	presynaptic cytosol	-	ISO	Component
GO:2000300	regulation of synaptic vesicle exocytosis	18936251.	IDA	Process
GO:2000300	regulation of synaptic vesicle exocytosis	18936251.	IMP	Process