EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000019822 (Gene tree)
Gene ID: 20598
Gene Symbol: Smpd2
Alias: nSMase
Full Name: sphingomyelin phosphodiesterase 2%2C neutral
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 4728 bases
Position: chr10:41485642-41490369
Accession: 1278330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000019965	Exo_endo_phos	PF03372.23	3.8e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000143470	-	2749	-	-	- (aa)	-	-
ENSMUST00000147367	-	828	-	-	- (aa)	-	-
ENSMUST00000141542	-	2365	-	-	- (aa)	-	-
ENSMUST00000132170	-	871	-	-	- (aa)	-	-
ENSMUST00000019965	-	1602	XM_006512633	ENSMUSP00000019965	419 (aa)	XP_006512696	O70572
ENSMUST00000155411	-	936	-	ENSMUSP00000115461	83 (aa)	-	D6RGM4
ENSMUST00000126833	-	4150	-	-	- (aa)	-	-
ENSMUST00000122997	-	441	-	-	- (aa)	-	-
ENSMUST00000147738	-	819	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000019822's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00600	Sphingolipid metabolism	KEGG
mmu01100	Metabolic pathways	KEGG
mmu04071	Sphingolipid signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000019822's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000019822	Smpd2	100	76.905	ENSG00000135587	SMPD2	99	76.905	Homo_sapiens
ENSMUSG00000019822	Smpd2	99	78.230	ENSAMEG00000016431	SMPD2	99	78.230	Ailuropoda_melanoleuca
ENSMUSG00000019822	Smpd2	92	47.103	ENSACIG00000010069	smpd2b	94	45.000	Amphilophus_citrinellus
ENSMUSG00000019822	Smpd2	92	45.865	ENSAOCG00000014544	smpd2b	90	45.113	Amphiprion_ocellaris
ENSMUSG00000019822	Smpd2	92	46.384	ENSAPEG00000023764	smpd2b	90	45.636	Amphiprion_percula
ENSMUSG00000019822	Smpd2	92	45.050	ENSATEG00000025113	smpd2b	91	43.890	Anabas_testudineus
ENSMUSG00000019822	Smpd2	72	55.116	ENSACAG00000009270	SMPD2	94	48.031	Anolis_carolinensis
ENSMUSG00000019822	Smpd2	99	76.627	ENSANAG00000028732	SMPD2	98	76.627	Aotus_nancymaae
ENSMUSG00000019822	Smpd2	92	46.782	ENSACLG00000022892	smpd2b	90	45.387	Astatotilapia_calliptera
ENSMUSG00000019822	Smpd2	77	50.303	ENSAMXG00000013614	smpd2b	76	50.303	Astyanax_mexicanus
ENSMUSG00000019822	Smpd2	100	75.238	ENSBTAG00000008145	SMPD2	69	75.238	Bos_taurus
ENSMUSG00000019822	Smpd2	73	40.606	WBGene00012105	T27F6.6	75	40.606	Caenorhabditis_elegans
ENSMUSG00000019822	Smpd2	99	76.145	ENSCJAG00000005756	SMPD2	98	76.145	Callithrix_jacchus
ENSMUSG00000019822	Smpd2	100	76.429	ENSCAFG00000003816	SMPD2	99	76.429	Canis_familiaris
ENSMUSG00000019822	Smpd2	100	74.762	ENSCHIG00000022563	SMPD2	99	74.762	Capra_hircus
ENSMUSG00000019822	Smpd2	100	74.762	ENSTSYG00000008525	SMPD2	99	74.762	Carlito_syrichta
ENSMUSG00000019822	Smpd2	82	71.014	ENSCAPG00000008057	SMPD2	97	71.014	Cavia_aperea
ENSMUSG00000019822	Smpd2	99	74.224	ENSCPOG00000003102	SMPD2	97	74.224	Cavia_porcellus
ENSMUSG00000019822	Smpd2	99	77.349	ENSCCAG00000036357	SMPD2	98	77.349	Cebus_capucinus
ENSMUSG00000019822	Smpd2	100	76.667	ENSCATG00000015266	SMPD2	99	76.667	Cercocebus_atys
ENSMUSG00000019822	Smpd2	100	70.510	ENSCLAG00000009948	SMPD2	98	70.824	Chinchilla_lanigera
ENSMUSG00000019822	Smpd2	100	75.952	ENSCSAG00000015322	SMPD2	99	75.952	Chlorocebus_sabaeus
ENSMUSG00000019822	Smpd2	76	58.125	ENSCPBG00000017837	SMPD2	78	58.125	Chrysemys_picta_bellii
ENSMUSG00000019822	Smpd2	100	76.190	ENSCANG00000029491	SMPD2	99	76.190	Colobus_angolensis_palliatus
ENSMUSG00000019822	Smpd2	100	83.294	ENSCGRG00001019999	Smpd2	100	83.294	Cricetulus_griseus_chok1gshd
ENSMUSG00000019822	Smpd2	100	83.294	ENSCGRG00000008928	Smpd2	100	83.294	Cricetulus_griseus_crigri
ENSMUSG00000019822	Smpd2	92	43.392	ENSCSEG00000016030	smpd2b	90	43.812	Cynoglossus_semilaevis
ENSMUSG00000019822	Smpd2	91	47.990	ENSCVAG00000020815	smpd2b	90	47.990	Cyprinodon_variegatus
ENSMUSG00000019822	Smpd2	74	52.244	ENSDARG00000040523	smpd2a	73	52.244	Danio_rerio
ENSMUSG00000019822	Smpd2	93	43.970	ENSDARG00000052701	smpd2b	92	44.221	Danio_rerio
ENSMUSG00000019822	Smpd2	100	74.286	ENSDNOG00000003948	SMPD2	99	74.286	Dasypus_novemcinctus
ENSMUSG00000019822	Smpd2	99	77.990	ENSDORG00000006485	Smpd2	99	77.990	Dipodomys_ordii
ENSMUSG00000019822	Smpd2	67	36.042	FBgn0035421	CG12034	64	36.082	Drosophila_melanogaster
ENSMUSG00000019822	Smpd2	95	45.368	ENSEBUG00000002962	smpd2b	97	46.062	Eptatretus_burgeri
ENSMUSG00000019822	Smpd2	100	77.619	ENSEASG00005006484	SMPD2	99	77.619	Equus_asinus_asinus
ENSMUSG00000019822	Smpd2	100	76.905	ENSECAG00000016972	SMPD2	99	76.905	Equus_caballus
ENSMUSG00000019822	Smpd2	92	43.970	ENSELUG00000021534	smpd2b	90	44.221	Esox_lucius
ENSMUSG00000019822	Smpd2	100	77.143	ENSFCAG00000006358	SMPD2	99	77.143	Felis_catus
ENSMUSG00000019822	Smpd2	75	59.810	ENSFALG00000003639	SMPD2	99	52.323	Ficedula_albicollis
ENSMUSG00000019822	Smpd2	91	48.990	ENSFHEG00000017395	smpd2b	89	47.583	Fundulus_heteroclitus
ENSMUSG00000019822	Smpd2	92	41.476	ENSGMOG00000015239	smpd2b	92	42.239	Gadus_morhua
ENSMUSG00000019822	Smpd2	78	58.232	ENSGALG00000033245	SMPD2	96	52.261	Gallus_gallus
ENSMUSG00000019822	Smpd2	98	46.047	ENSGAFG00000016345	smpd2b	97	46.047	Gambusia_affinis
ENSMUSG00000019822	Smpd2	92	46.482	ENSGACG00000005132	smpd2b	92	45.570	Gasterosteus_aculeatus
ENSMUSG00000019822	Smpd2	76	59.375	ENSGAGG00000023942	SMPD2	97	51.508	Gopherus_agassizii
ENSMUSG00000019822	Smpd2	100	77.619	ENSGGOG00000003394	SMPD2	99	77.619	Gorilla_gorilla
ENSMUSG00000019822	Smpd2	100	76.429	ENSHGLG00000000226	SMPD2	99	76.429	Heterocephalus_glaber_female
ENSMUSG00000019822	Smpd2	100	76.429	ENSHGLG00100016698	SMPD2	99	76.429	Heterocephalus_glaber_male
ENSMUSG00000019822	Smpd2	76	50.307	ENSHCOG00000001358	smpd2b	91	45.202	Hippocampus_comes
ENSMUSG00000019822	Smpd2	96	41.481	ENSIPUG00000017284	smpd2a	67	53.091	Ictalurus_punctatus
ENSMUSG00000019822	Smpd2	91	45.063	ENSIPUG00000024794	smpd2b	92	45.063	Ictalurus_punctatus
ENSMUSG00000019822	Smpd2	99	77.349	ENSSTOG00000028661	SMPD2	99	77.349	Ictidomys_tridecemlineatus
ENSMUSG00000019822	Smpd2	99	81.490	ENSJJAG00000019368	Smpd2	99	81.490	Jaculus_jaculus
ENSMUSG00000019822	Smpd2	98	45.581	ENSKMAG00000015753	smpd2b	98	44.444	Kryptolebias_marmoratus
ENSMUSG00000019822	Smpd2	91	45.316	ENSLBEG00000024878	smpd2b	90	44.388	Labrus_bergylta
ENSMUSG00000019822	Smpd2	90	46.632	ENSLACG00000016351	smpd2b	93	47.668	Latimeria_chalumnae
ENSMUSG00000019822	Smpd2	78	49.849	ENSLOCG00000009741	smpd2b	91	45.455	Lepisosteus_oculatus
ENSMUSG00000019822	Smpd2	100	71.564	ENSLAFG00000003298	SMPD2	100	71.564	Loxodonta_africana
ENSMUSG00000019822	Smpd2	100	76.667	ENSMFAG00000033236	SMPD2	99	76.667	Macaca_fascicularis
ENSMUSG00000019822	Smpd2	100	76.667	ENSMNEG00000042401	SMPD2	99	76.667	Macaca_nemestrina
ENSMUSG00000019822	Smpd2	88	75.472	ENSMLEG00000039457	SMPD2	99	75.676	Mandrillus_leucophaeus
ENSMUSG00000019822	Smpd2	98	44.240	ENSMAMG00000004710	smpd2b	97	43.155	Mastacembelus_armatus
ENSMUSG00000019822	Smpd2	92	46.782	ENSMZEG00005002958	smpd2b	90	45.387	Maylandia_zebra
ENSMUSG00000019822	Smpd2	80	55.952	ENSMGAG00000006821	SMPD2	96	51.629	Meleagris_gallopavo
ENSMUSG00000019822	Smpd2	100	84.964	ENSMAUG00000008721	Smpd2	100	84.964	Mesocricetus_auratus
ENSMUSG00000019822	Smpd2	100	78.333	ENSMICG00000014442	SMPD2	99	78.333	Microcebus_murinus
ENSMUSG00000019822	Smpd2	100	80.191	ENSMOCG00000019666	Smpd2	99	81.618	Microtus_ochrogaster
ENSMUSG00000019822	Smpd2	93	46.883	ENSMMOG00000012679	smpd2b	91	45.980	Mola_mola
ENSMUSG00000019822	Smpd2	95	54.964	ENSMODG00000017971	SMPD2	93	55.637	Monodelphis_domestica
ENSMUSG00000019822	Smpd2	98	45.035	ENSMALG00000000267	smpd2b	95	46.650	Monopterus_albus
ENSMUSG00000019822	Smpd2	100	95.943	MGP_CAROLIEiJ_G0015268	Smpd2	100	95.943	Mus_caroli
ENSMUSG00000019822	Smpd2	100	93.795	MGP_PahariEiJ_G0030686	Smpd2	100	93.795	Mus_pahari
ENSMUSG00000019822	Smpd2	100	99.045	MGP_SPRETEiJ_G0016077	Smpd2	100	99.045	Mus_spretus
ENSMUSG00000019822	Smpd2	99	76.077	ENSMPUG00000010005	SMPD2	99	76.077	Mustela_putorius_furo
ENSMUSG00000019822	Smpd2	100	75.714	ENSMLUG00000003793	SMPD2	99	75.714	Myotis_lucifugus
ENSMUSG00000019822	Smpd2	58	92.213	ENSNGAG00000013670	Smpd2	93	92.213	Nannospalax_galili
ENSMUSG00000019822	Smpd2	89	45.431	ENSNBRG00000008403	smpd2b	89	43.990	Neolamprologus_brichardi
ENSMUSG00000019822	Smpd2	100	76.429	ENSNLEG00000012570	SMPD2	99	76.429	Nomascus_leucogenys
ENSMUSG00000019822	Smpd2	97	52.217	ENSMEUG00000004602	SMPD2	96	52.217	Notamacropus_eugenii
ENSMUSG00000019822	Smpd2	97	73.580	ENSOPRG00000012612	SMPD2	96	73.580	Ochotona_princeps
ENSMUSG00000019822	Smpd2	92	47.030	ENSONIG00000014702	smpd2b	90	45.636	Oreochromis_niloticus
ENSMUSG00000019822	Smpd2	99	75.837	ENSOCUG00000008607	SMPD2	99	75.837	Oryctolagus_cuniculus
ENSMUSG00000019822	Smpd2	97	45.814	ENSORLG00000006334	smpd2b	96	44.496	Oryzias_latipes
ENSMUSG00000019822	Smpd2	97	45.794	ENSORLG00020015231	smpd2b	96	44.471	Oryzias_latipes_hni
ENSMUSG00000019822	Smpd2	97	45.794	ENSORLG00015010424	smpd2b	96	44.471	Oryzias_latipes_hsok
ENSMUSG00000019822	Smpd2	97	45.476	ENSOMEG00000016121	smpd2b	96	43.925	Oryzias_melastigma
ENSMUSG00000019822	Smpd2	100	75.952	ENSOGAG00000015505	SMPD2	99	75.000	Otolemur_garnettii
ENSMUSG00000019822	Smpd2	100	68.868	ENSOARG00000010409	SMPD2	99	68.868	Ovis_aries
ENSMUSG00000019822	Smpd2	100	76.905	ENSPPAG00000031363	SMPD2	99	76.905	Pan_paniscus
ENSMUSG00000019822	Smpd2	100	76.667	ENSPPRG00000000099	SMPD2	99	76.667	Panthera_pardus
ENSMUSG00000019822	Smpd2	100	76.667	ENSPTIG00000008954	SMPD2	99	76.667	Panthera_tigris_altaica
ENSMUSG00000019822	Smpd2	100	76.905	ENSPTRG00000018484	SMPD2	99	76.905	Pan_troglodytes
ENSMUSG00000019822	Smpd2	100	76.905	ENSPANG00000024480	SMPD2	99	76.905	Papio_anubis
ENSMUSG00000019822	Smpd2	76	49.844	ENSPKIG00000011322	smpd2a	70	49.844	Paramormyrops_kingsleyae
ENSMUSG00000019822	Smpd2	88	43.883	ENSPMGG00000000230	smpd2b	91	44.855	Periophthalmus_magnuspinnatus
ENSMUSG00000019822	Smpd2	98	82.396	ENSPEMG00000018109	Smpd2	99	82.396	Peromyscus_maniculatus_bairdii
ENSMUSG00000019822	Smpd2	75	50.633	ENSPMAG00000002460	smpd2b	90	50.633	Petromyzon_marinus
ENSMUSG00000019822	Smpd2	95	57.531	ENSPCIG00000005984	SMPD2	94	57.531	Phascolarctos_cinereus
ENSMUSG00000019822	Smpd2	91	48.241	ENSPFOG00000014164	smpd2b	90	48.241	Poecilia_formosa
ENSMUSG00000019822	Smpd2	91	48.241	ENSPLAG00000014950	smpd2b	90	48.241	Poecilia_latipinna
ENSMUSG00000019822	Smpd2	91	48.241	ENSPMEG00000002286	smpd2b	90	48.241	Poecilia_mexicana
ENSMUSG00000019822	Smpd2	98	46.279	ENSPREG00000012181	smpd2b	97	46.279	Poecilia_reticulata
ENSMUSG00000019822	Smpd2	100	76.429	ENSPPYG00000016908	-	73	76.429	Pongo_abelii
ENSMUSG00000019822	Smpd2	100	72.315	ENSPCAG00000011808	SMPD2	99	72.315	Procavia_capensis
ENSMUSG00000019822	Smpd2	100	79.048	ENSPCOG00000001714	SMPD2	99	79.048	Propithecus_coquereli
ENSMUSG00000019822	Smpd2	100	75.714	ENSPVAG00000006556	SMPD2	99	75.714	Pteropus_vampyrus
ENSMUSG00000019822	Smpd2	92	47.487	ENSPNYG00000005567	smpd2b	90	46.076	Pundamilia_nyererei
ENSMUSG00000019822	Smpd2	93	45.050	ENSPNAG00000007986	smpd2b	91	46.192	Pygocentrus_nattereri
ENSMUSG00000019822	Smpd2	100	87.589	ENSRNOG00000000306	Smpd2	99	87.589	Rattus_norvegicus
ENSMUSG00000019822	Smpd2	100	76.667	ENSRBIG00000033388	SMPD2	99	76.667	Rhinopithecus_bieti
ENSMUSG00000019822	Smpd2	100	76.905	ENSRROG00000037705	SMPD2	99	76.905	Rhinopithecus_roxellana
ENSMUSG00000019822	Smpd2	99	76.867	ENSSBOG00000033929	SMPD2	98	76.867	Saimiri_boliviensis_boliviensis
ENSMUSG00000019822	Smpd2	76	48.615	ENSSFOG00015022890	smpd2	91	42.928	Scleropages_formosus
ENSMUSG00000019822	Smpd2	92	46.782	ENSSMAG00000008963	smpd2b	90	45.636	Scophthalmus_maximus
ENSMUSG00000019822	Smpd2	97	43.619	ENSSDUG00000000098	smpd2b	96	43.155	Seriola_dumerili
ENSMUSG00000019822	Smpd2	91	46.292	ENSSLDG00000009497	smpd2b	90	45.226	Seriola_lalandi_dorsalis
ENSMUSG00000019822	Smpd2	100	74.048	ENSSARG00000006192	SMPD2	99	74.048	Sorex_araneus
ENSMUSG00000019822	Smpd2	75	57.911	ENSSPUG00000013852	SMPD2	76	57.911	Sphenodon_punctatus
ENSMUSG00000019822	Smpd2	92	46.040	ENSSPAG00000001844	smpd2b	90	44.888	Stegastes_partitus
ENSMUSG00000019822	Smpd2	100	76.190	ENSSSCG00000004408	SMPD2	99	76.190	Sus_scrofa
ENSMUSG00000019822	Smpd2	93	51.134	ENSTGUG00000001713	SMPD2	97	51.134	Taeniopygia_guttata
ENSMUSG00000019822	Smpd2	92	46.096	ENSTRUG00000025701	smpd2b	91	45.340	Takifugu_rubripes
ENSMUSG00000019822	Smpd2	92	47.328	ENSTNIG00000018297	smpd2b	97	46.310	Tetraodon_nigroviridis
ENSMUSG00000019822	Smpd2	100	75.714	ENSTBEG00000009336	SMPD2	99	75.714	Tupaia_belangeri
ENSMUSG00000019822	Smpd2	100	72.381	ENSTTRG00000004183	SMPD2	99	72.381	Tursiops_truncatus
ENSMUSG00000019822	Smpd2	99	78.469	ENSUAMG00000018011	SMPD2	99	78.469	Ursus_americanus
ENSMUSG00000019822	Smpd2	89	76.139	ENSUMAG00000025505	SMPD2	91	76.486	Ursus_maritimus
ENSMUSG00000019822	Smpd2	82	47.368	ENSXETG00000000421	smpd2	83	47.289	Xenopus_tropicalis
ENSMUSG00000019822	Smpd2	89	46.615	ENSXCOG00000015987	smpd2b	89	45.144	Xiphophorus_couchianus
ENSMUSG00000019822	Smpd2	91	47.487	ENSXMAG00000018088	smpd2b	90	46.076	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004767	sphingomyelin phosphodiesterase activity	21873635.	IBA	Function
GO:0004767	sphingomyelin phosphodiesterase activity	15764706.	IMP	Function
GO:0004767	sphingomyelin phosphodiesterase activity	-	ISO	Function
GO:0005901	caveola	21873635.	IBA	Component
GO:0005901	caveola	-	ISO	Component
GO:0006629	lipid metabolic process	-	IEA	Process
GO:0006665	sphingolipid metabolic process	-	IEA	Process
GO:0006684	sphingomyelin metabolic process	21873635.	IBA	Process
GO:0006685	sphingomyelin catabolic process	23973266.	IMP	Process
GO:0009612	response to mechanical stimulus	-	ISO	Process
GO:0016020	membrane	-	ISO	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0035556	intracellular signal transduction	-	ISO	Process
GO:0043065	positive regulation of apoptotic process	-	ISO	Process
GO:0046513	ceramide biosynthetic process	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function