EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000019916 (Gene tree)
Gene ID: 18451
Gene Symbol: P4ha1
Alias: P4ha
Full Name: procollagen-proline%2C 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase)%2C alpha 1 polypeptide
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 50009 bases
Position: chr10:59323296-59373304
Accession: 97463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000090170	2OG-FeII_Oxy	PF03171.20	4.1e-08	1	1
ENSMUSP00000101106	2OG-FeII_Oxy	PF03171.20	5.4e-08	1	1
ENSMUSP00000009789	2OG-FeII_Oxy	PF03171.20	5.5e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000092512	-	2387	-	ENSMUSP00000090170	454 (aa)	-	E9Q7B0
ENSMUST00000009789	-	4043	-	ENSMUSP00000009789	534 (aa)	-	Q60715
ENSMUST00000105466	-	2918	-	ENSMUSP00000101106	534 (aa)	-	Q60715

Gene Model

Click here to download ENSMUSG00000019916's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00330	Arginine and proline metabolism	KEGG
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000019916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000019916	P4ha1	96	64.535	ENSMUSG00000018906	P4ha2	99	62.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000019916	P4ha1	100	95.693	ENSG00000122884	P4HA1	100	95.693	Homo_sapiens
ENSMUSG00000019916	P4ha1	96	77.622	ENSAPOG00000005170	p4ha1b	99	73.713	Acanthochromis_polyacanthus
ENSMUSG00000019916	P4ha1	100	94.944	ENSAMEG00000017009	P4HA1	100	94.944	Ailuropoda_melanoleuca
ENSMUSG00000019916	P4ha1	96	78.261	ENSACIG00000007255	p4ha1b	99	73.996	Amphilophus_citrinellus
ENSMUSG00000019916	P4ha1	96	78.322	ENSAOCG00000001647	p4ha1b	98	74.170	Amphiprion_ocellaris
ENSMUSG00000019916	P4ha1	95	72.388	ENSAPEG00000010402	-	96	64.717	Amphiprion_percula
ENSMUSG00000019916	P4ha1	96	78.322	ENSAPEG00000005243	p4ha1b	98	74.170	Amphiprion_percula
ENSMUSG00000019916	P4ha1	96	79.720	ENSATEG00000009272	p4ha1b	98	75.325	Anabas_testudineus
ENSMUSG00000019916	P4ha1	97	85.988	ENSAPLG00000009284	P4HA1	100	85.988	Anas_platyrhynchos
ENSMUSG00000019916	P4ha1	100	84.015	ENSACAG00000000564	P4HA1	99	84.015	Anolis_carolinensis
ENSMUSG00000019916	P4ha1	100	96.256	ENSANAG00000024545	P4HA1	100	97.333	Aotus_nancymaae
ENSMUSG00000019916	P4ha1	96	79.710	ENSACLG00000021556	p4ha1b	99	74.359	Astatotilapia_calliptera
ENSMUSG00000019916	P4ha1	100	75.163	ENSAMXG00000011123	p4ha1b	100	72.963	Astyanax_mexicanus
ENSMUSG00000019916	P4ha1	100	96.000	ENSBTAG00000032996	P4HA1	100	94.944	Bos_taurus
ENSMUSG00000019916	P4ha1	100	96.035	ENSCJAG00000007429	P4HA1	100	96.035	Callithrix_jacchus
ENSMUSG00000019916	P4ha1	100	97.000	ENSCAFG00000014573	P4HA1	100	94.944	Canis_familiaris
ENSMUSG00000019916	P4ha1	99	97.000	ENSCAFG00020023993	P4HA1	100	93.208	Canis_lupus_dingo
ENSMUSG00000019916	P4ha1	100	96.333	ENSCHIG00000013957	P4HA1	100	94.569	Capra_hircus
ENSMUSG00000019916	P4ha1	100	96.000	ENSTSYG00000004004	P4HA1	100	95.902	Carlito_syrichta
ENSMUSG00000019916	P4ha1	100	96.333	ENSCPOG00000015701	P4HA1	100	96.333	Cavia_porcellus
ENSMUSG00000019916	P4ha1	100	96.035	ENSCATG00000029618	P4HA1	100	97.000	Cercocebus_atys
ENSMUSG00000019916	P4ha1	100	96.667	ENSCLAG00000017260	P4HA1	100	96.667	Chinchilla_lanigera
ENSMUSG00000019916	P4ha1	100	95.506	ENSCSAG00000008626	P4HA1	100	95.506	Chlorocebus_sabaeus
ENSMUSG00000019916	P4ha1	99	86.755	ENSCPBG00000007933	P4HA1	99	85.607	Chrysemys_picta_bellii
ENSMUSG00000019916	P4ha1	100	96.035	ENSCANG00000033147	P4HA1	100	97.000	Colobus_angolensis_palliatus
ENSMUSG00000019916	P4ha1	100	97.000	ENSCGRG00001007006	P4ha1	100	95.815	Cricetulus_griseus_chok1gshd
ENSMUSG00000019916	P4ha1	100	97.000	ENSCGRG00000009371	P4ha1	100	95.815	Cricetulus_griseus_crigri
ENSMUSG00000019916	P4ha1	100	72.509	ENSCSEG00000004939	p4ha1b	99	72.509	Cynoglossus_semilaevis
ENSMUSG00000019916	P4ha1	100	72.222	ENSCVAG00000016433	p4ha1b	100	72.029	Cyprinodon_variegatus
ENSMUSG00000019916	P4ha1	97	75.479	ENSDARG00000071082	p4ha1b	100	76.316	Danio_rerio
ENSMUSG00000019916	P4ha1	84	54.472	ENSDARG00000017038	zgc:152670	95	54.274	Danio_rerio
ENSMUSG00000019916	P4ha1	99	93.960	ENSDNOG00000013665	P4HA1	94	92.481	Dasypus_novemcinctus
ENSMUSG00000019916	P4ha1	100	97.000	ENSDORG00000003405	P4ha1	100	95.154	Dipodomys_ordii
ENSMUSG00000019916	P4ha1	98	62.305	ENSEBUG00000005379	p4ha1b	98	60.721	Eptatretus_burgeri
ENSMUSG00000019916	P4ha1	100	95.815	ENSEASG00005016606	P4HA1	100	97.000	Equus_asinus_asinus
ENSMUSG00000019916	P4ha1	99	93.396	ENSECAG00000012496	P4HA1	99	96.063	Equus_caballus
ENSMUSG00000019916	P4ha1	99	89.610	ENSEEUG00000005542	P4HA1	85	89.610	Erinaceus_europaeus
ENSMUSG00000019916	P4ha1	99	72.828	ENSELUG00000005913	p4ha1b	99	74.275	Esox_lucius
ENSMUSG00000019916	P4ha1	100	96.333	ENSFCAG00000018673	P4HA1	100	94.944	Felis_catus
ENSMUSG00000019916	P4ha1	99	87.417	ENSFALG00000012773	P4HA1	99	84.860	Ficedula_albicollis
ENSMUSG00000019916	P4ha1	100	95.333	ENSFDAG00000007094	P4HA1	100	86.220	Fukomys_damarensis
ENSMUSG00000019916	P4ha1	96	76.224	ENSFHEG00000022856	p4ha1b	98	73.211	Fundulus_heteroclitus
ENSMUSG00000019916	P4ha1	94	71.382	ENSGMOG00000018948	p4ha1b	99	70.155	Gadus_morhua
ENSMUSG00000019916	P4ha1	99	88.079	ENSGALG00000004325	P4HA1	100	85.047	Gallus_gallus
ENSMUSG00000019916	P4ha1	97	75.429	ENSGAFG00000019818	p4ha1b	98	74.307	Gambusia_affinis
ENSMUSG00000019916	P4ha1	96	73.427	ENSGACG00000010233	p4ha1b	99	72.037	Gasterosteus_aculeatus
ENSMUSG00000019916	P4ha1	100	96.035	ENSGGOG00000015551	P4HA1	100	97.000	Gorilla_gorilla
ENSMUSG00000019916	P4ha1	96	79.710	ENSHBUG00000015524	p4ha1b	98	72.963	Haplochromis_burtoni
ENSMUSG00000019916	P4ha1	100	96.667	ENSHGLG00000011764	P4HA1	100	96.667	Heterocephalus_glaber_female
ENSMUSG00000019916	P4ha1	94	75.000	ENSHCOG00000017152	p4ha1b	99	73.930	Hippocampus_comes
ENSMUSG00000019916	P4ha1	97	75.290	ENSIPUG00000015157	P4HA1	100	73.970	Ictalurus_punctatus
ENSMUSG00000019916	P4ha1	100	95.815	ENSSTOG00000027062	P4HA1	100	95.815	Ictidomys_tridecemlineatus
ENSMUSG00000019916	P4ha1	100	95.374	ENSJJAG00000004232	P4ha1	100	95.374	Jaculus_jaculus
ENSMUSG00000019916	P4ha1	96	76.224	ENSKMAG00000001588	p4ha1b	99	73.897	Kryptolebias_marmoratus
ENSMUSG00000019916	P4ha1	97	74.761	ENSLBEG00000018911	p4ha1b	98	73.655	Labrus_bergylta
ENSMUSG00000019916	P4ha1	98	81.418	ENSLACG00000010202	P4HA1	99	79.963	Latimeria_chalumnae
ENSMUSG00000019916	P4ha1	99	78.431	ENSLOCG00000008546	p4ha1b	98	77.528	Lepisosteus_oculatus
ENSMUSG00000019916	P4ha1	100	92.884	ENSLAFG00000002652	P4HA1	100	92.884	Loxodonta_africana
ENSMUSG00000019916	P4ha1	100	96.035	ENSMFAG00000030507	P4HA1	100	97.000	Macaca_fascicularis
ENSMUSG00000019916	P4ha1	100	96.035	ENSMMUG00000011274	P4HA1	100	97.000	Macaca_mulatta
ENSMUSG00000019916	P4ha1	99	93.246	ENSMNEG00000011433	P4HA1	98	95.303	Macaca_nemestrina
ENSMUSG00000019916	P4ha1	96	90.215	ENSMLEG00000043338	P4HA1	100	98.770	Mandrillus_leucophaeus
ENSMUSG00000019916	P4ha1	96	77.622	ENSMAMG00000015854	p4ha1b	99	73.655	Mastacembelus_armatus
ENSMUSG00000019916	P4ha1	96	79.710	ENSMZEG00005027421	p4ha1b	98	72.963	Maylandia_zebra
ENSMUSG00000019916	P4ha1	99	84.916	ENSMGAG00000005554	P4HA1	100	86.513	Meleagris_gallopavo
ENSMUSG00000019916	P4ha1	100	78.879	ENSMAUG00000011056	P4ha1	97	89.333	Mesocricetus_auratus
ENSMUSG00000019916	P4ha1	100	96.035	ENSMICG00000031365	P4HA1	100	97.000	Microcebus_murinus
ENSMUSG00000019916	P4ha1	100	97.667	ENSMOCG00000017531	P4ha1	100	96.916	Microtus_ochrogaster
ENSMUSG00000019916	P4ha1	96	77.622	ENSMMOG00000008022	p4ha1b	99	74.026	Mola_mola
ENSMUSG00000019916	P4ha1	100	92.079	ENSMODG00000000121	P4HA1	99	89.385	Monodelphis_domestica
ENSMUSG00000019916	P4ha1	96	76.224	ENSMALG00000019674	p4ha1b	98	73.333	Monopterus_albus
ENSMUSG00000019916	P4ha1	100	99.559	MGP_CAROLIEiJ_G0015342	P4ha1	100	99.559	Mus_caroli
ENSMUSG00000019916	P4ha1	100	99.119	MGP_PahariEiJ_G0030758	P4ha1	100	99.333	Mus_pahari
ENSMUSG00000019916	P4ha1	100	100.000	MGP_SPRETEiJ_G0016153	P4ha1	100	100.000	Mus_spretus
ENSMUSG00000019916	P4ha1	100	96.667	ENSMPUG00000003940	P4HA1	100	95.131	Mustela_putorius_furo
ENSMUSG00000019916	P4ha1	100	94.569	ENSMLUG00000006548	P4HA1	100	94.569	Myotis_lucifugus
ENSMUSG00000019916	P4ha1	100	98.333	ENSNGAG00000014487	P4ha1	100	98.333	Nannospalax_galili
ENSMUSG00000019916	P4ha1	96	79.710	ENSNBRG00000014791	p4ha1b	99	74.060	Neolamprologus_brichardi
ENSMUSG00000019916	P4ha1	100	89.485	ENSNLEG00000035416	P4HA1	99	95.851	Nomascus_leucogenys
ENSMUSG00000019916	P4ha1	89	91.429	ENSMEUG00000010326	P4HA1	95	81.762	Notamacropus_eugenii
ENSMUSG00000019916	P4ha1	100	89.000	ENSOPRG00000000990	P4HA1	100	83.895	Ochotona_princeps
ENSMUSG00000019916	P4ha1	100	95.154	ENSODEG00000015164	P4HA1	100	95.154	Octodon_degus
ENSMUSG00000019916	P4ha1	96	79.710	ENSONIG00000000737	p4ha1b	88	73.346	Oreochromis_niloticus
ENSMUSG00000019916	P4ha1	80	91.608	ENSOANG00000001125	-	100	91.608	Ornithorhynchus_anatinus
ENSMUSG00000019916	P4ha1	100	94.195	ENSOCUG00000009739	P4HA1	100	94.195	Oryctolagus_cuniculus
ENSMUSG00000019916	P4ha1	96	76.923	ENSORLG00000005147	p4ha1b	100	75.194	Oryzias_latipes
ENSMUSG00000019916	P4ha1	96	76.923	ENSORLG00020010911	p4ha1b	98	73.801	Oryzias_latipes_hni
ENSMUSG00000019916	P4ha1	87	79.167	ENSORLG00015016175	p4ha1b	98	74.741	Oryzias_latipes_hsok
ENSMUSG00000019916	P4ha1	96	77.622	ENSOMEG00000009962	p4ha1b	99	74.677	Oryzias_melastigma
ENSMUSG00000019916	P4ha1	100	94.030	ENSOGAG00000003483	P4HA1	100	94.030	Otolemur_garnettii
ENSMUSG00000019916	P4ha1	100	96.333	ENSOARG00000007348	P4HA1	100	94.569	Ovis_aries
ENSMUSG00000019916	P4ha1	100	88.540	ENSPPAG00000030135	P4HA1	100	98.770	Pan_paniscus
ENSMUSG00000019916	P4ha1	100	96.333	ENSPPRG00000002655	P4HA1	100	94.944	Panthera_pardus
ENSMUSG00000019916	P4ha1	100	96.333	ENSPTIG00000007711	P4HA1	100	94.944	Panthera_tigris_altaica
ENSMUSG00000019916	P4ha1	100	93.833	ENSPTRG00000002619	P4HA1	100	93.833	Pan_troglodytes
ENSMUSG00000019916	P4ha1	100	96.035	ENSPANG00000022355	P4HA1	100	97.000	Papio_anubis
ENSMUSG00000019916	P4ha1	99	76.030	ENSPKIG00000000438	p4ha1b	99	76.030	Paramormyrops_kingsleyae
ENSMUSG00000019916	P4ha1	99	87.417	ENSPSIG00000016298	P4HA1	100	85.955	Pelodiscus_sinensis
ENSMUSG00000019916	P4ha1	95	80.597	ENSPMGG00000007593	p4ha1b	99	74.624	Periophthalmus_magnuspinnatus
ENSMUSG00000019916	P4ha1	100	96.067	ENSPEMG00000006561	P4ha1	100	96.067	Peromyscus_maniculatus_bairdii
ENSMUSG00000019916	P4ha1	100	92.079	ENSPCIG00000018768	P4HA1	100	89.944	Phascolarctos_cinereus
ENSMUSG00000019916	P4ha1	96	76.923	ENSPFOG00000018574	p4ha1b	98	73.752	Poecilia_formosa
ENSMUSG00000019916	P4ha1	96	76.923	ENSPLAG00000012628	p4ha1b	99	74.837	Poecilia_latipinna
ENSMUSG00000019916	P4ha1	96	76.224	ENSPMEG00000024082	p4ha1b	98	73.567	Poecilia_mexicana
ENSMUSG00000019916	P4ha1	96	76.923	ENSPREG00000010003	p4ha1b	98	74.492	Poecilia_reticulata
ENSMUSG00000019916	P4ha1	100	95.693	ENSPPYG00000002348	P4HA1	100	95.693	Pongo_abelii
ENSMUSG00000019916	P4ha1	95	85.630	ENSPCOG00000017553	P4HA1	100	98.361	Propithecus_coquereli
ENSMUSG00000019916	P4ha1	99	85.333	ENSPVAG00000012989	P4HA1	99	84.906	Pteropus_vampyrus
ENSMUSG00000019916	P4ha1	96	79.710	ENSPNYG00000002443	p4ha1b	98	72.878	Pundamilia_nyererei
ENSMUSG00000019916	P4ha1	100	72.928	ENSPNAG00000023149	p4ha1b	99	73.383	Pygocentrus_nattereri
ENSMUSG00000019916	P4ha1	100	99.667	ENSRNOG00000050655	P4ha1	100	98.502	Rattus_norvegicus
ENSMUSG00000019916	P4ha1	100	91.824	ENSRBIG00000035304	P4HA1	100	82.959	Rhinopithecus_bieti
ENSMUSG00000019916	P4ha1	100	96.035	ENSRROG00000044078	P4HA1	100	97.000	Rhinopithecus_roxellana
ENSMUSG00000019916	P4ha1	71	89.896	ENSSHAG00000008056	P4HA1	100	88.342	Sarcophilus_harrisii
ENSMUSG00000019916	P4ha1	94	81.102	ENSSFOG00015009176	p4ha1b	100	75.882	Scleropages_formosus
ENSMUSG00000019916	P4ha1	100	73.290	ENSSMAG00000019199	p4ha1b	99	73.013	Scophthalmus_maximus
ENSMUSG00000019916	P4ha1	96	76.923	ENSSDUG00000016587	p4ha1b	98	73.752	Seriola_dumerili
ENSMUSG00000019916	P4ha1	96	76.224	ENSSLDG00000016261	p4ha1b	98	74.122	Seriola_lalandi_dorsalis
ENSMUSG00000019916	P4ha1	100	90.449	ENSSARG00000003275	P4HA1	100	90.449	Sorex_araneus
ENSMUSG00000019916	P4ha1	99	85.206	ENSSPUG00000002624	P4HA1	99	85.206	Sphenodon_punctatus
ENSMUSG00000019916	P4ha1	83	82.895	ENSSPAG00000011193	p4ha1b	100	73.134	Stegastes_partitus
ENSMUSG00000019916	P4ha1	100	95.667	ENSSSCG00000010292	P4HA1	100	94.569	Sus_scrofa
ENSMUSG00000019916	P4ha1	99	86.755	ENSTGUG00000004364	-	99	84.486	Taeniopygia_guttata
ENSMUSG00000019916	P4ha1	99	72.756	ENSTRUG00000004081	p4ha1b	99	73.394	Takifugu_rubripes
ENSMUSG00000019916	P4ha1	99	73.667	ENSTNIG00000017021	p4ha1b	99	73.084	Tetraodon_nigroviridis
ENSMUSG00000019916	P4ha1	100	93.446	ENSTTRG00000009782	P4HA1	100	92.884	Tursiops_truncatus
ENSMUSG00000019916	P4ha1	54	98.770	ENSUAMG00000011694	-	100	98.770	Ursus_americanus
ENSMUSG00000019916	P4ha1	100	95.318	ENSUMAG00000009024	P4HA1	100	95.318	Ursus_maritimus
ENSMUSG00000019916	P4ha1	100	96.333	ENSVPAG00000007253	P4HA1	100	85.019	Vicugna_pacos
ENSMUSG00000019916	P4ha1	100	97.000	ENSVVUG00000022660	P4HA1	100	94.944	Vulpes_vulpes
ENSMUSG00000019916	P4ha1	99	80.795	ENSXETG00000006154	p4ha1	99	75.701	Xenopus_tropicalis
ENSMUSG00000019916	P4ha1	96	78.261	ENSXCOG00000010262	p4ha1b	99	73.567	Xiphophorus_couchianus
ENSMUSG00000019916	P4ha1	96	76.224	ENSXMAG00000003889	p4ha1b	98	73.840	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004656	procollagen-proline 4-dioxygenase activity	21873635.	IBA	Function
GO:0004656	procollagen-proline 4-dioxygenase activity	7753822.	IDA	Function
GO:0004656	procollagen-proline 4-dioxygenase activity	17135260.	IMP	Function
GO:0005506	iron ion binding	-	IEA	Function
GO:0005739	mitochondrion	-	ISO	Component
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0016222	procollagen-proline 4-dioxygenase complex	7753822.	IDA	Component
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	-	IEA	Function
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	-	IEA	Function
GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	21873635.	IBA	Process
GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	7753822.	IDA	Process
GO:0030199	collagen fibril organization	17135260.	IMP	Process
GO:0031418	L-ascorbic acid binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0051213	dioxygenase activity	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process