EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000020085	-	1431	XM_006513478	ENSMUSP00000020085	147 (aa)	XP_006513541	P61080
ENSMUST00000144636	-	490	-	-	- (aa)	-	-
ENSMUST00000144231	-	3158	-	-	- (aa)	-	-

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu04120	Ubiquitin mediated proteolysis	KEGG
mmu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000151	ubiquitin ligase complex	21873635.	IBA	Component
GO:0000151	ubiquitin ligase complex	-	ISO	Component
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000209	protein polyubiquitination	18511420.	IDA	Process
GO:0000209	protein polyubiquitination	-	ISO	Process
GO:0004842	ubiquitin-protein transferase activity	-	ISO	Function
GO:0005515	protein binding	14980219.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0006511	ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0006511	ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0031398	positive regulation of protein ubiquitination	-	ISO	Process
GO:0031625	ubiquitin protein ligase binding	21873635.	IBA	Function
GO:0032991	protein-containing complex	22797923.	ISO	Component
GO:0061631	ubiquitin conjugating enzyme activity	21873635.	IBA	Function
GO:0061631	ubiquitin conjugating enzyme activity	22797923.	IDA	Function
GO:0061631	ubiquitin conjugating enzyme activity	23509263.	ISO	Function
GO:0070936	protein K48-linked ubiquitination	21873635.	IBA	Process
GO:0070936	protein K48-linked ubiquitination	-	ISO	Process
GO:1902916	positive regulation of protein polyubiquitination	18621737.	IGI	Process