EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000019947 (Gene tree)
Gene ID: 71371
Gene Symbol: Arid5b
Alias: 5430435G07Rik|Desrt|Mrf2|Mrf2alpha|Mrf2beta
Full Name: AT rich interactive domain 5B (MRF1-like)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 186221
Position: chr10: 68092520-68278740
Accession: 2175912
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000219238	-	7581	XM_006514129	ENSMUSP00000151227	1188 (aa)	XP_006514192	Q8BM75
ENSMUST00000218532	-	3025	XM_006514131	ENSMUSP00000151665	945 (aa)	XP_006514194	Q8BM75
ENSMUST00000020106	-	4202	-	ENSMUSP00000020106	254 (aa)	-	A0A1X7SB62
ENSMUST00000218425	-	2946	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000019947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000019947's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	-	ISO	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISO	Function
GO:0001822	kidney development	17143286.	IMP	Process
GO:0003677	DNA binding	-	ISO	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0006357	regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0006807	nitrogen compound metabolic process	17143286.	IMP	Process
GO:0008584	male gonad development	11483573.	IMP	Process
GO:0008585	female gonad development	11483573.	IMP	Process
GO:0009791	post-embryonic development	17143286.	IMP	Process
GO:0010761	fibroblast migration	17143286.	IMP	Process
GO:0030325	adrenal gland development	11483573.	IMP	Process
GO:0035264	multicellular organism growth	17143286.	IMP	Process
GO:0044212	transcription regulatory region DNA binding	21873635.	IBA	Function
GO:0044212	transcription regulatory region DNA binding	-	ISO	Function
GO:0045444	fat cell differentiation	17962384.	IMP	Process
GO:0048008	platelet-derived growth factor receptor signaling pathway	17143286.	IMP	Process
GO:0048468	cell development	17962384.	IMP	Process
GO:0048644	muscle organ morphogenesis	17143286.	IMP	Process
GO:0048705	skeletal system morphogenesis	17143286.	IMP	Process
GO:0051091	positive regulation of DNA-binding transcription factor activity	17962384.	IMP	Process
GO:0051091	positive regulation of DNA-binding transcription factor activity	-	ISO	Process
GO:0060021	roof of mouth development	17143286.	IMP	Process
GO:0060325	face morphogenesis	17143286.	IMP	Process
GO:0060612	adipose tissue development	18070594.	IMP	Process
GO:0060613	fat pad development	14651970.	IMP	Process
GO:1990830	cellular response to leukemia inhibitory factor	20439489.	IEP	Process