EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000019961 (Gene tree)
Gene ID: 21917
Gene Symbol: Tmpo
Alias: 5630400D24Rik|LAP2|TP|lamina-associated polypeptide 2
Full Name: thymopoietin
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 33745
Position: chr10: 91147571-91181315
Accession: 106920
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000214391	-	2520	-	-	- (aa)	-	-
ENSMUST00000105293	-	1842	-	ENSMUSP00000100930	343 (aa)	-	Q61029
ENSMUST00000217449	-	2115	-	-	- (aa)	-	-
ENSMUST00000072239	-	3533	-	ENSMUSP00000072092	452 (aa)	-	Q61029
ENSMUST00000215126	-	1213	-	-	- (aa)	-	-
ENSMUST00000099355	-	1953	-	ENSMUSP00000096956	380 (aa)	-	Q61029
ENSMUST00000213270	-	471	-	-	- (aa)	-	-
ENSMUST00000213262	-	788	-	-	- (aa)	-	-
ENSMUST00000216402	-	732	-	-	- (aa)	-	-
ENSMUST00000215801	-	654	-	-	- (aa)	-	-
ENSMUST00000092219	-	1854	XM_006513590	ENSMUSP00000089864	412 (aa)	XP_006513653	Q61029
ENSMUST00000020123	-	3772	-	ENSMUSP00000020123	693 (aa)	-	Q61033
ENSMUST00000216501	-	4441	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000019961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000019961's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000019961	Tmpo	100	92.308	ENSG00000120802	TMPO	100	94.093	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000785	chromatin	17284516.	ISO	Component
GO:0003677	DNA binding	-	IEA	Function
GO:0005515	protein binding	11591818.22726435.	IPI	Function
GO:0005634	nucleus	17284516.	ISO	Component
GO:0005635	nuclear envelope	11591818.18809722.	IDA	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005637	nuclear inner membrane	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005789	endoplasmic reticulum membrane	-	ISO	Component
GO:0006355	regulation of transcription, DNA-templated	11591818.	IDA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0031965	nuclear membrane	-	ISO	Component
GO:0042802	identical protein binding	17562312.	IPI	Function