EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020079 (Gene tree)
Gene ID: 338359
Gene Symbol: Supv3l1
Alias: 6330443E10Rik
Full Name: suppressor of var1%2C 3-like 1 (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 20530 bases
Position: chr10:62429209-62449738
Accession: 2441711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000020273	SUV3_C	PF12513.8	1.2e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000162023	-	2519	-	ENSMUSP00000137905	256 (aa)	-	M0QWM4
ENSMUST00000159042	-	890	-	-	- (aa)	-	-
ENSMUST00000161830	-	620	-	-	- (aa)	-	-
ENSMUST00000020273	-	2604	XM_006513809	ENSMUSP00000020273	779 (aa)	-	Q80YD1
ENSMUST00000161941	-	117	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000020079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020079	Supv3l1	100	86.912	ENSG00000156502	SUPV3L1	100	87.039	Homo_sapiens
ENSMUSG00000020079	Supv3l1	98	67.624	ENSAPOG00000012040	supv3l1	99	66.413	Acanthochromis_polyacanthus
ENSMUSG00000020079	Supv3l1	100	86.456	ENSAMEG00000017957	SUPV3L1	100	86.203	Ailuropoda_melanoleuca
ENSMUSG00000020079	Supv3l1	81	72.134	ENSACIG00000006824	supv3l1	99	70.489	Amphilophus_citrinellus
ENSMUSG00000020079	Supv3l1	98	68.016	ENSAOCG00000022898	supv3l1	99	66.878	Amphiprion_ocellaris
ENSMUSG00000020079	Supv3l1	98	68.016	ENSAPEG00000006805	supv3l1	99	66.878	Amphiprion_percula
ENSMUSG00000020079	Supv3l1	99	64.520	ENSATEG00000021682	supv3l1	100	64.520	Anabas_testudineus
ENSMUSG00000020079	Supv3l1	88	70.522	ENSAPLG00000012258	SUPV3L1	99	70.522	Anas_platyrhynchos
ENSMUSG00000020079	Supv3l1	90	73.306	ENSACAG00000009685	SUPV3L1	97	69.162	Anolis_carolinensis
ENSMUSG00000020079	Supv3l1	100	86.277	ENSANAG00000022155	SUPV3L1	100	86.404	Aotus_nancymaae
ENSMUSG00000020079	Supv3l1	90	71.671	ENSACLG00000008303	supv3l1	99	66.961	Astatotilapia_calliptera
ENSMUSG00000020079	Supv3l1	94	69.346	ENSAMXG00000009658	supv3l1	99	66.368	Astyanax_mexicanus
ENSMUSG00000020079	Supv3l1	79	49.351	WBGene00007444	C08F8.2	99	44.902	Caenorhabditis_elegans
ENSMUSG00000020079	Supv3l1	100	85.642	ENSCJAG00000012937	SUPV3L1	100	85.769	Callithrix_jacchus
ENSMUSG00000020079	Supv3l1	100	86.802	ENSCAFG00000013839	SUPV3L1	93	86.929	Canis_familiaris
ENSMUSG00000020079	Supv3l1	83	87.786	ENSCAFG00020025942	SUPV3L1	100	87.786	Canis_lupus_dingo
ENSMUSG00000020079	Supv3l1	100	86.573	ENSCHIG00000000074	SUPV3L1	100	87.596	Capra_hircus
ENSMUSG00000020079	Supv3l1	100	85.914	ENSTSYG00000012845	SUPV3L1	100	86.294	Carlito_syrichta
ENSMUSG00000020079	Supv3l1	100	85.515	ENSCPOG00000010044	SUPV3L1	100	85.642	Cavia_porcellus
ENSMUSG00000020079	Supv3l1	100	82.658	ENSCCAG00000033975	SUPV3L1	100	83.100	Cebus_capucinus
ENSMUSG00000020079	Supv3l1	100	81.115	ENSCATG00000030043	SUPV3L1	100	81.242	Cercocebus_atys
ENSMUSG00000020079	Supv3l1	100	86.404	ENSCLAG00000010181	SUPV3L1	100	86.531	Chinchilla_lanigera
ENSMUSG00000020079	Supv3l1	100	86.531	ENSCSAG00000007811	SUPV3L1	100	86.658	Chlorocebus_sabaeus
ENSMUSG00000020079	Supv3l1	92	85.576	ENSCHOG00000008008	SUPV3L1	99	85.714	Choloepus_hoffmanni
ENSMUSG00000020079	Supv3l1	86	71.704	ENSCPBG00000000660	SUPV3L1	98	73.002	Chrysemys_picta_bellii
ENSMUSG00000020079	Supv3l1	74	42.808	ENSCING00000008091	-	89	42.808	Ciona_intestinalis
ENSMUSG00000020079	Supv3l1	100	86.658	ENSCANG00000036962	SUPV3L1	100	86.785	Colobus_angolensis_palliatus
ENSMUSG00000020079	Supv3l1	100	94.223	ENSCGRG00001020865	Supv3l1	100	94.223	Cricetulus_griseus_chok1gshd
ENSMUSG00000020079	Supv3l1	100	94.223	ENSCGRG00000014899	Supv3l1	100	94.223	Cricetulus_griseus_crigri
ENSMUSG00000020079	Supv3l1	99	64.385	ENSCSEG00000014061	supv3l1	92	67.808	Cynoglossus_semilaevis
ENSMUSG00000020079	Supv3l1	93	70.782	ENSCVAG00000009948	supv3l1	93	70.178	Cyprinodon_variegatus
ENSMUSG00000020079	Supv3l1	92	70.474	ENSDARG00000077728	supv3l1	92	70.474	Danio_rerio
ENSMUSG00000020079	Supv3l1	100	85.769	ENSDNOG00000004855	SUPV3L1	100	86.150	Dasypus_novemcinctus
ENSMUSG00000020079	Supv3l1	100	86.650	ENSDORG00000016650	Supv3l1	100	86.521	Dipodomys_ordii
ENSMUSG00000020079	Supv3l1	90	59.264	FBgn0037232	Suv3	90	59.264	Drosophila_melanogaster
ENSMUSG00000020079	Supv3l1	91	65.309	ENSEBUG00000010807	supv3l1	83	65.954	Eptatretus_burgeri
ENSMUSG00000020079	Supv3l1	100	88.422	ENSEASG00005015607	SUPV3L1	100	88.422	Equus_asinus_asinus
ENSMUSG00000020079	Supv3l1	100	88.422	ENSECAG00000016297	SUPV3L1	100	88.422	Equus_caballus
ENSMUSG00000020079	Supv3l1	100	69.632	ENSEEUG00000007717	SUPV3L1	100	69.759	Erinaceus_europaeus
ENSMUSG00000020079	Supv3l1	97	68.116	ENSELUG00000018676	supv3l1	100	66.371	Esox_lucius
ENSMUSG00000020079	Supv3l1	100	87.326	ENSFCAG00000004921	SUPV3L1	100	87.326	Felis_catus
ENSMUSG00000020079	Supv3l1	88	70.099	ENSFALG00000013094	SUPV3L1	99	70.099	Ficedula_albicollis
ENSMUSG00000020079	Supv3l1	100	84.615	ENSFDAG00000011147	SUPV3L1	100	84.744	Fukomys_damarensis
ENSMUSG00000020079	Supv3l1	99	66.834	ENSFHEG00000011288	supv3l1	100	66.834	Fundulus_heteroclitus
ENSMUSG00000020079	Supv3l1	82	72.273	ENSGMOG00000012387	supv3l1	95	73.906	Gadus_morhua
ENSMUSG00000020079	Supv3l1	93	69.892	ENSGALG00000004197	SUPV3L1	93	69.892	Gallus_gallus
ENSMUSG00000020079	Supv3l1	86	72.997	ENSGAFG00000003909	supv3l1	96	70.822	Gambusia_affinis
ENSMUSG00000020079	Supv3l1	97	67.725	ENSGACG00000016077	supv3l1	96	67.725	Gasterosteus_aculeatus
ENSMUSG00000020079	Supv3l1	99	71.979	ENSGAGG00000015564	SUPV3L1	98	73.149	Gopherus_agassizii
ENSMUSG00000020079	Supv3l1	100	86.912	ENSGGOG00000005325	SUPV3L1	100	87.039	Gorilla_gorilla
ENSMUSG00000020079	Supv3l1	90	71.530	ENSHBUG00000017736	supv3l1	99	66.835	Haplochromis_burtoni
ENSMUSG00000020079	Supv3l1	100	84.891	ENSHGLG00000014418	SUPV3L1	100	84.891	Heterocephalus_glaber_female
ENSMUSG00000020079	Supv3l1	100	84.547	ENSHGLG00100005752	SUPV3L1	100	84.547	Heterocephalus_glaber_male
ENSMUSG00000020079	Supv3l1	98	68.146	ENSHCOG00000013962	supv3l1	97	68.146	Hippocampus_comes
ENSMUSG00000020079	Supv3l1	99	68.333	ENSIPUG00000015765	supv3l1	100	68.333	Ictalurus_punctatus
ENSMUSG00000020079	Supv3l1	100	88.575	ENSSTOG00000000503	SUPV3L1	99	88.062	Ictidomys_tridecemlineatus
ENSMUSG00000020079	Supv3l1	100	84.879	ENSJJAG00000012919	Supv3l1	100	84.752	Jaculus_jaculus
ENSMUSG00000020079	Supv3l1	99	67.097	ENSKMAG00000020644	supv3l1	99	66.286	Kryptolebias_marmoratus
ENSMUSG00000020079	Supv3l1	98	67.097	ENSLBEG00000009091	supv3l1	97	67.097	Labrus_bergylta
ENSMUSG00000020079	Supv3l1	86	64.933	ENSLACG00000008028	SUPV3L1	97	64.933	Latimeria_chalumnae
ENSMUSG00000020079	Supv3l1	90	70.816	ENSLOCG00000009159	supv3l1	91	70.334	Lepisosteus_oculatus
ENSMUSG00000020079	Supv3l1	100	86.277	ENSLAFG00000000889	SUPV3L1	100	86.404	Loxodonta_africana
ENSMUSG00000020079	Supv3l1	100	86.658	ENSMFAG00000003566	SUPV3L1	100	88.092	Macaca_fascicularis
ENSMUSG00000020079	Supv3l1	100	86.531	ENSMNEG00000016010	SUPV3L1	100	86.658	Macaca_nemestrina
ENSMUSG00000020079	Supv3l1	100	86.658	ENSMLEG00000028551	SUPV3L1	100	86.785	Mandrillus_leucophaeus
ENSMUSG00000020079	Supv3l1	93	69.441	ENSMAMG00000020254	supv3l1	94	68.942	Mastacembelus_armatus
ENSMUSG00000020079	Supv3l1	90	71.388	ENSMZEG00005011568	supv3l1	99	66.709	Maylandia_zebra
ENSMUSG00000020079	Supv3l1	88	69.916	ENSMGAG00000004251	SUPV3L1	99	69.819	Meleagris_gallopavo
ENSMUSG00000020079	Supv3l1	100	93.196	ENSMAUG00000005895	Supv3l1	100	92.683	Mesocricetus_auratus
ENSMUSG00000020079	Supv3l1	100	86.277	ENSMICG00000014955	SUPV3L1	100	86.658	Microcebus_murinus
ENSMUSG00000020079	Supv3l1	100	92.327	ENSMOCG00000013772	Supv3l1	100	92.327	Microtus_ochrogaster
ENSMUSG00000020079	Supv3l1	86	71.791	ENSMMOG00000015898	supv3l1	98	70.115	Mola_mola
ENSMUSG00000020079	Supv3l1	97	77.822	ENSMODG00000010700	SUPV3L1	99	77.822	Monodelphis_domestica
ENSMUSG00000020079	Supv3l1	99	60.435	ENSMALG00000005447	supv3l1	100	60.307	Monopterus_albus
ENSMUSG00000020079	Supv3l1	100	98.716	MGP_CAROLIEiJ_G0015383	Supv3l1	100	98.716	Mus_caroli
ENSMUSG00000020079	Supv3l1	100	89.602	MGP_PahariEiJ_G0030799	Supv3l1	100	89.602	Mus_pahari
ENSMUSG00000020079	Supv3l1	100	99.487	MGP_SPRETEiJ_G0016195	Supv3l1	100	99.487	Mus_spretus
ENSMUSG00000020079	Supv3l1	100	86.020	ENSMPUG00000004499	SUPV3L1	100	86.020	Mustela_putorius_furo
ENSMUSG00000020079	Supv3l1	100	86.277	ENSMLUG00000012664	-	100	86.404	Myotis_lucifugus
ENSMUSG00000020079	Supv3l1	60	76.409	ENSMLUG00000024349	-	100	76.409	Myotis_lucifugus
ENSMUSG00000020079	Supv3l1	100	88.889	ENSNGAG00000001563	Supv3l1	100	88.889	Nannospalax_galili
ENSMUSG00000020079	Supv3l1	98	87.206	ENSNLEG00000011521	SUPV3L1	98	87.337	Nomascus_leucogenys
ENSMUSG00000020079	Supv3l1	99	76.123	ENSMEUG00000009010	SUPV3L1	99	75.731	Notamacropus_eugenii
ENSMUSG00000020079	Supv3l1	100	78.399	ENSOPRG00000001705	SUPV3L1	100	78.526	Ochotona_princeps
ENSMUSG00000020079	Supv3l1	100	85.678	ENSODEG00000014392	SUPV3L1	100	85.806	Octodon_degus
ENSMUSG00000020079	Supv3l1	88	75.714	ENSOANG00000008886	SUPV3L1	99	75.714	Ornithorhynchus_anatinus
ENSMUSG00000020079	Supv3l1	100	86.404	ENSOCUG00000004933	SUPV3L1	100	86.531	Oryctolagus_cuniculus
ENSMUSG00000020079	Supv3l1	98	67.405	ENSORLG00000010240	supv3l1	97	69.154	Oryzias_latipes
ENSMUSG00000020079	Supv3l1	98	67.275	ENSORLG00020004189	supv3l1	99	65.736	Oryzias_latipes_hni
ENSMUSG00000020079	Supv3l1	93	69.931	ENSORLG00015002310	supv3l1	94	68.273	Oryzias_latipes_hsok
ENSMUSG00000020079	Supv3l1	98	67.102	ENSOMEG00000004719	supv3l1	99	65.693	Oryzias_melastigma
ENSMUSG00000020079	Supv3l1	100	85.987	ENSOGAG00000005905	SUPV3L1	100	86.115	Otolemur_garnettii
ENSMUSG00000020079	Supv3l1	83	87.023	ENSOARG00000005389	SUPV3L1	100	87.023	Ovis_aries
ENSMUSG00000020079	Supv3l1	100	86.912	ENSPPAG00000034596	SUPV3L1	100	87.039	Pan_paniscus
ENSMUSG00000020079	Supv3l1	100	87.183	ENSPPRG00000004832	SUPV3L1	100	87.310	Panthera_pardus
ENSMUSG00000020079	Supv3l1	100	86.929	ENSPTIG00000004317	SUPV3L1	100	87.056	Panthera_tigris_altaica
ENSMUSG00000020079	Supv3l1	100	86.785	ENSPTRG00000002568	SUPV3L1	100	86.912	Pan_troglodytes
ENSMUSG00000020079	Supv3l1	100	82.465	ENSPANG00000022168	SUPV3L1	100	82.592	Papio_anubis
ENSMUSG00000020079	Supv3l1	89	70.774	ENSPKIG00000014484	supv3l1	88	70.571	Paramormyrops_kingsleyae
ENSMUSG00000020079	Supv3l1	97	70.641	ENSPSIG00000017997	SUPV3L1	96	74.332	Pelodiscus_sinensis
ENSMUSG00000020079	Supv3l1	92	65.690	ENSPMGG00000001235	supv3l1	99	65.379	Periophthalmus_magnuspinnatus
ENSMUSG00000020079	Supv3l1	100	92.465	ENSPEMG00000016292	-	100	92.593	Peromyscus_maniculatus_bairdii
ENSMUSG00000020079	Supv3l1	99	75.095	ENSPCIG00000015440	SUPV3L1	99	75.158	Phascolarctos_cinereus
ENSMUSG00000020079	Supv3l1	92	71.269	ENSPFOG00000015968	supv3l1	90	71.269	Poecilia_formosa
ENSMUSG00000020079	Supv3l1	92	71.269	ENSPLAG00000012582	supv3l1	90	71.269	Poecilia_latipinna
ENSMUSG00000020079	Supv3l1	92	70.990	ENSPMEG00000015003	supv3l1	90	70.990	Poecilia_mexicana
ENSMUSG00000020079	Supv3l1	97	68.700	ENSPREG00000014702	supv3l1	97	68.700	Poecilia_reticulata
ENSMUSG00000020079	Supv3l1	100	86.404	ENSPPYG00000002385	SUPV3L1	100	86.531	Pongo_abelii
ENSMUSG00000020079	Supv3l1	88	76.374	ENSPCOG00000021435	SUPV3L1	96	76.374	Propithecus_coquereli
ENSMUSG00000020079	Supv3l1	91	87.179	ENSPVAG00000009536	SUPV3L1	91	87.771	Pteropus_vampyrus
ENSMUSG00000020079	Supv3l1	91	71.368	ENSPNYG00000015894	supv3l1	97	68.010	Pundamilia_nyererei
ENSMUSG00000020079	Supv3l1	94	70.872	ENSPNAG00000018698	supv3l1	99	68.521	Pygocentrus_nattereri
ENSMUSG00000020079	Supv3l1	97	93.236	ENSRNOG00000000392	Supv3l1	99	96.081	Rattus_norvegicus
ENSMUSG00000020079	Supv3l1	100	86.785	ENSRROG00000000787	SUPV3L1	100	86.912	Rhinopithecus_roxellana
ENSMUSG00000020079	Supv3l1	66	35.460	YPL029W	SUV3	70	35.460	Saccharomyces_cerevisiae
ENSMUSG00000020079	Supv3l1	100	85.896	ENSSBOG00000033775	SUPV3L1	100	86.023	Saimiri_boliviensis_boliviensis
ENSMUSG00000020079	Supv3l1	100	75.094	ENSSHAG00000000910	SUPV3L1	87	75.220	Sarcophilus_harrisii
ENSMUSG00000020079	Supv3l1	88	71.902	ENSSFOG00015014751	supv3l1	99	71.902	Scleropages_formosus
ENSMUSG00000020079	Supv3l1	97	66.536	ENSSMAG00000004035	supv3l1	97	66.536	Scophthalmus_maximus
ENSMUSG00000020079	Supv3l1	97	66.710	ENSSDUG00000021594	supv3l1	99	65.370	Seriola_dumerili
ENSMUSG00000020079	Supv3l1	97	66.883	ENSSLDG00000025671	supv3l1	99	65.535	Seriola_lalandi_dorsalis
ENSMUSG00000020079	Supv3l1	100	69.000	ENSSPUG00000004216	SUPV3L1	99	69.057	Sphenodon_punctatus
ENSMUSG00000020079	Supv3l1	98	66.667	ENSSPAG00000012762	supv3l1	100	66.709	Stegastes_partitus
ENSMUSG00000020079	Supv3l1	83	87.939	ENSSSCG00000010251	SUPV3L1	100	87.939	Sus_scrofa
ENSMUSG00000020079	Supv3l1	78	78.678	ENSTGUG00000003907	SUPV3L1	100	78.678	Taeniopygia_guttata
ENSMUSG00000020079	Supv3l1	99	66.247	ENSTRUG00000001882	supv3l1	100	66.373	Takifugu_rubripes
ENSMUSG00000020079	Supv3l1	97	66.969	ENSTNIG00000013794	supv3l1	100	65.823	Tetraodon_nigroviridis
ENSMUSG00000020079	Supv3l1	85	78.027	ENSTBEG00000015538	SUPV3L1	100	78.027	Tupaia_belangeri
ENSMUSG00000020079	Supv3l1	100	85.985	ENSUAMG00000018007	SUPV3L1	99	87.582	Ursus_americanus
ENSMUSG00000020079	Supv3l1	83	87.062	ENSUMAG00000007773	SUPV3L1	100	87.062	Ursus_maritimus
ENSMUSG00000020079	Supv3l1	100	86.329	ENSVVUG00000020506	SUPV3L1	93	86.329	Vulpes_vulpes
ENSMUSG00000020079	Supv3l1	92	68.450	ENSXETG00000008852	supv3l1	99	68.457	Xenopus_tropicalis
ENSMUSG00000020079	Supv3l1	95	69.314	ENSXCOG00000012026	supv3l1	93	69.852	Xiphophorus_couchianus
ENSMUSG00000020079	Supv3l1	95	69.583	ENSXMAG00000014547	supv3l1	91	72.389	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000958	mitochondrial mRNA catabolic process	-	ISO	Process
GO:0000962	positive regulation of mitochondrial RNA catabolic process	-	ISO	Process
GO:0000965	mitochondrial RNA 3'-end processing	21873635.	IBA	Process
GO:0000965	mitochondrial RNA 3'-end processing	-	ISO	Process
GO:0003677	DNA binding	-	ISO	Function
GO:0003678	DNA helicase activity	-	ISO	Function
GO:0003725	double-stranded RNA binding	-	ISO	Function
GO:0004004	ATP-dependent RNA helicase activity	21873635.	IBA	Function
GO:0004004	ATP-dependent RNA helicase activity	-	ISO	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0006310	DNA recombination	-	ISO	Process
GO:0006401	RNA catabolic process	21873635.	IBA	Process
GO:0006401	RNA catabolic process	-	ISO	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0016817	hydrolase activity, acting on acid anhydrides	-	IEA	Function
GO:0030307	positive regulation of cell growth	-	ISO	Process
GO:0032508	DNA duplex unwinding	-	ISO	Process
GO:0034458	3'-5' RNA helicase activity	-	ISO	Function
GO:0035945	mitochondrial ncRNA surveillance	-	ISO	Process
GO:0035946	mitochondrial mRNA surveillance	-	ISO	Process
GO:0042645	mitochondrial nucleoid	-	ISO	Component
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:0045025	mitochondrial degradosome	21873635.	IBA	Component
GO:0045025	mitochondrial degradosome	-	ISO	Component
GO:0070584	mitochondrion morphogenesis	-	ISO	Process
GO:0070827	chromatin maintenance	-	ISO	Process
GO:2000827	mitochondrial RNA surveillance	-	ISO	Process