EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020088 (Gene tree)
Gene ID: 20224
Gene Symbol: Sar1a
Alias: 1600019H17Rik|Sara1
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 12999 bases
Position: chr10:61680299-61693297
Accession: 98230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000020285	MMR_HSR1	PF01926.23	1.4e-05	1	1
ENSMUSP00000151383	MMR_HSR1	PF01926.23	1.4e-05	1	1
ENSMUSP00000151339	MMR_HSR1	PF01926.23	1.4e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000218172	-	501	-	-	- (aa)	-	-
ENSMUST00000219055	-	334	-	ENSMUSP00000151361	10 (aa)	-	A0A1W2P6R1
ENSMUST00000218474	-	357	-	ENSMUSP00000151444	81 (aa)	-	A0A1W2P720
ENSMUST00000020285	-	2613	XM_006513398	ENSMUSP00000020285	198 (aa)	XP_006513461	Q99JZ4
ENSMUST00000218968	-	483	-	-	- (aa)	-	-
ENSMUST00000218741	-	406	-	ENSMUSP00000151885	95 (aa)	-	A0A1W2P869
ENSMUST00000220372	-	651	-	ENSMUSP00000151339	131 (aa)	-	A0A1W2P6N3
ENSMUST00000219506	-	897	XM_011243389	ENSMUSP00000151383	198 (aa)	XP_011241691	Q99JZ4
ENSMUST00000219174	-	319	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000020088's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04141	Protein processing in endoplasmic reticulum	KEGG
mmu05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000020088	Sar1a	94	34.831	ENSMUSG00000051853	Arf3	67	31.148
ENSMUSG00000020088	Sar1a	93	40.860	ENSMUSG00000047446	Arl4a	76	34.868
ENSMUSG00000020088	Sar1a	91	35.227	ENSMUSG00000022722	Arl6	63	35.043
ENSMUSG00000020088	Sar1a	100	93.130	ENSMUSG00000020386	Sar1b	100	90.909
ENSMUSG00000020088	Sar1a	94	32.584	ENSMUSG00000038352	Arl5c	59	31.429
ENSMUSG00000020088	Sar1a	67	30.075	ENSMUSG00000030105	Arl8b	72	30.075
ENSMUSG00000020088	Sar1a	95	35.556	ENSMUSG00000020440	Arf5	61	32.110
ENSMUSG00000020088	Sar1a	95	35.556	ENSMUSG00000024944	Arl2	78	31.469
ENSMUSG00000020088	Sar1a	89	33.684	ENSMUSG00000038671	Arfrp1	77	33.684
ENSMUSG00000020088	Sar1a	96	40.217	ENSMUSG00000043157	Arl11	91	33.526
ENSMUSG00000020088	Sar1a	95	32.967	ENSMUSG00000025870	Arl10	53	31.818
ENSMUSG00000020088	Sar1a	94	34.831	ENSMUSG00000060904	Arl1	92	30.709
ENSMUSG00000020088	Sar1a	93	36.667	ENSMUSG00000098207	Arl14	86	31.818
ENSMUSG00000020088	Sar1a	94	34.831	ENSMUSG00000048076	Arf1	64	32.174
ENSMUSG00000020088	Sar1a	93	40.860	ENSMUSG00000049866	Arl4c	69	33.333
ENSMUSG00000020088	Sar1a	94	34.831	ENSMUSG00000062421	Arf2	60	31.193
ENSMUSG00000020088	Sar1a	89	31.765	ENSMUSG00000025035	Arl3	58	34.286
ENSMUSG00000020088	Sar1a	94	35.955	ENSMUSG00000017418	Arl5b	61	33.333
ENSMUSG00000020088	Sar1a	94	32.584	ENSMUSG00000036093	Arl5a	59	30.476
ENSMUSG00000020088	Sar1a	94	40.426	ENSMUSG00000034936	Arl4d	60	38.843

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020088	Sar1a	100	99.495	ENSG00000079332	SAR1A	100	100.000	Homo_sapiens
ENSMUSG00000020088	Sar1a	100	99.495	ENSAMEG00000017868	SAR1A	100	99.495	Ailuropoda_melanoleuca
ENSMUSG00000020088	Sar1a	100	100.000	ENSANAG00000030371	SAR1A	100	100.000	Aotus_nancymaae
ENSMUSG00000020088	Sar1a	100	99.495	ENSBTAG00000016858	SAR1A	100	99.495	Bos_taurus
ENSMUSG00000020088	Sar1a	100	99.495	ENSCJAG00000042744	-	100	99.495	Callithrix_jacchus
ENSMUSG00000020088	Sar1a	100	99.495	ENSCAFG00020025897	SAR1A	100	99.495	Canis_lupus_dingo
ENSMUSG00000020088	Sar1a	100	99.495	ENSCHIG00000018882	SAR1A	100	99.495	Capra_hircus
ENSMUSG00000020088	Sar1a	97	94.565	ENSTSYG00000033030	-	100	86.735	Carlito_syrichta
ENSMUSG00000020088	Sar1a	100	100.000	ENSTSYG00000005955	-	100	100.000	Carlito_syrichta
ENSMUSG00000020088	Sar1a	100	99.495	ENSCPOG00000032583	SAR1A	100	99.495	Cavia_porcellus
ENSMUSG00000020088	Sar1a	100	99.237	ENSCCAG00000019722	SAR1A	100	97.980	Cebus_capucinus
ENSMUSG00000020088	Sar1a	100	99.495	ENSCATG00000039017	SAR1A	100	99.495	Cercocebus_atys
ENSMUSG00000020088	Sar1a	100	99.495	ENSCLAG00000012839	SAR1A	100	99.495	Chinchilla_lanigera
ENSMUSG00000020088	Sar1a	100	99.495	ENSCSAG00000008263	SAR1A	100	99.495	Chlorocebus_sabaeus
ENSMUSG00000020088	Sar1a	100	99.495	ENSCHOG00000000472	-	100	99.495	Choloepus_hoffmanni
ENSMUSG00000020088	Sar1a	100	100.000	ENSCPBG00000025882	SAR1A	100	97.475	Chrysemys_picta_bellii
ENSMUSG00000020088	Sar1a	100	99.495	ENSCANG00000038841	SAR1A	100	99.495	Colobus_angolensis_palliatus
ENSMUSG00000020088	Sar1a	100	100.000	ENSCGRG00001016695	Sar1a	100	99.495	Cricetulus_griseus_chok1gshd
ENSMUSG00000020088	Sar1a	100	100.000	ENSCGRG00000014890	Sar1a	100	99.495	Cricetulus_griseus_crigri
ENSMUSG00000020088	Sar1a	100	100.000	ENSDNOG00000035765	-	100	100.000	Dasypus_novemcinctus
ENSMUSG00000020088	Sar1a	93	93.182	ENSDORG00000029471	-	94	87.647	Dipodomys_ordii
ENSMUSG00000020088	Sar1a	100	100.000	ENSDORG00000023465	-	100	99.495	Dipodomys_ordii
ENSMUSG00000020088	Sar1a	100	99.495	ENSEASG00005016046	SAR1A	100	99.495	Equus_asinus_asinus
ENSMUSG00000020088	Sar1a	100	99.495	ENSECAG00000009730	SAR1A	100	99.495	Equus_caballus
ENSMUSG00000020088	Sar1a	100	99.495	ENSFCAG00000043085	SAR1A	100	99.495	Felis_catus
ENSMUSG00000020088	Sar1a	100	99.237	ENSFALG00000012661	SAR1A	100	97.475	Ficedula_albicollis
ENSMUSG00000020088	Sar1a	100	99.495	ENSFDAG00000010673	SAR1A	100	99.495	Fukomys_damarensis
ENSMUSG00000020088	Sar1a	100	100.000	ENSGALG00000004431	SAR1A	100	97.980	Gallus_gallus
ENSMUSG00000020088	Sar1a	100	99.237	ENSGAGG00000013705	SAR1A	100	96.970	Gopherus_agassizii
ENSMUSG00000020088	Sar1a	100	99.495	ENSGGOG00000024879	SAR1A	100	99.495	Gorilla_gorilla
ENSMUSG00000020088	Sar1a	100	99.495	ENSHGLG00000016765	SAR1A	100	99.495	Heterocephalus_glaber_female
ENSMUSG00000020088	Sar1a	100	99.495	ENSHGLG00100017379	SAR1A	100	99.495	Heterocephalus_glaber_male
ENSMUSG00000020088	Sar1a	100	100.000	ENSSTOG00000012780	SAR1A	100	100.000	Ictidomys_tridecemlineatus
ENSMUSG00000020088	Sar1a	100	98.485	ENSJJAG00000016603	-	100	98.485	Jaculus_jaculus
ENSMUSG00000020088	Sar1a	100	100.000	ENSLAFG00000004046	SAR1A	100	99.495	Loxodonta_africana
ENSMUSG00000020088	Sar1a	100	99.495	ENSMFAG00000039894	SAR1A	100	99.495	Macaca_fascicularis
ENSMUSG00000020088	Sar1a	100	99.495	ENSMMUG00000006398	SAR1A	100	99.495	Macaca_mulatta
ENSMUSG00000020088	Sar1a	100	99.495	ENSMNEG00000030362	SAR1A	100	99.495	Macaca_nemestrina
ENSMUSG00000020088	Sar1a	100	99.495	ENSMLEG00000037528	SAR1A	100	99.495	Mandrillus_leucophaeus
ENSMUSG00000020088	Sar1a	100	100.000	ENSMAUG00000005624	Sar1a	100	99.495	Mesocricetus_auratus
ENSMUSG00000020088	Sar1a	100	93.130	ENSMICG00000035294	-	95	82.902	Microcebus_murinus
ENSMUSG00000020088	Sar1a	100	100.000	ENSMICG00000001638	-	100	100.000	Microcebus_murinus
ENSMUSG00000020088	Sar1a	100	99.237	ENSMOCG00000018004	Sar1a	100	98.990	Microtus_ochrogaster
ENSMUSG00000020088	Sar1a	100	100.000	MGP_CAROLIEiJ_G0015372	Sar1a	100	100.000	Mus_caroli
ENSMUSG00000020088	Sar1a	100	100.000	MGP_PahariEiJ_G0030788	Sar1a	100	100.000	Mus_pahari
ENSMUSG00000020088	Sar1a	100	100.000	MGP_SPRETEiJ_G0016183	Sar1a	100	100.000	Mus_spretus
ENSMUSG00000020088	Sar1a	100	99.495	ENSMPUG00000004338	SAR1A	100	99.495	Mustela_putorius_furo
ENSMUSG00000020088	Sar1a	100	99.237	ENSMLUG00000006626	SAR1A	100	98.990	Myotis_lucifugus
ENSMUSG00000020088	Sar1a	100	100.000	ENSNGAG00000010545	Sar1a	100	98.990	Nannospalax_galili
ENSMUSG00000020088	Sar1a	100	99.495	ENSNLEG00000011243	SAR1A	100	99.495	Nomascus_leucogenys
ENSMUSG00000020088	Sar1a	100	99.237	ENSODEG00000014517	SAR1A	100	99.476	Octodon_degus
ENSMUSG00000020088	Sar1a	100	98.473	ENSOANG00000012148	SAR1A	100	96.465	Ornithorhynchus_anatinus
ENSMUSG00000020088	Sar1a	100	100.000	ENSOCUG00000004547	SAR1A	100	100.000	Oryctolagus_cuniculus
ENSMUSG00000020088	Sar1a	100	100.000	ENSOGAG00000005040	SAR1A	100	100.000	Otolemur_garnettii
ENSMUSG00000020088	Sar1a	100	99.237	ENSOARG00000005884	SAR1A	100	98.990	Ovis_aries
ENSMUSG00000020088	Sar1a	100	99.495	ENSPPAG00000031193	SAR1A	100	99.495	Pan_paniscus
ENSMUSG00000020088	Sar1a	100	99.495	ENSPPRG00000023919	-	100	99.495	Panthera_pardus
ENSMUSG00000020088	Sar1a	100	99.495	ENSPTIG00000015795	SAR1A	100	99.495	Panthera_tigris_altaica
ENSMUSG00000020088	Sar1a	100	99.495	ENSPTRG00000002584	SAR1A	100	99.495	Pan_troglodytes
ENSMUSG00000020088	Sar1a	100	99.495	ENSPANG00000022249	SAR1A	100	99.495	Papio_anubis
ENSMUSG00000020088	Sar1a	100	99.237	ENSPSIG00000014285	SAR1A	100	96.970	Pelodiscus_sinensis
ENSMUSG00000020088	Sar1a	100	98.473	ENSPCIG00000015309	-	100	96.970	Phascolarctos_cinereus
ENSMUSG00000020088	Sar1a	100	99.495	ENSPPYG00000002374	SAR1A	100	99.495	Pongo_abelii
ENSMUSG00000020088	Sar1a	100	100.000	ENSPCOG00000021042	SAR1A	100	100.000	Propithecus_coquereli
ENSMUSG00000020088	Sar1a	100	100.000	ENSPVAG00000000098	SAR1A	100	100.000	Pteropus_vampyrus
ENSMUSG00000020088	Sar1a	100	99.495	ENSRBIG00000031590	SAR1A	100	99.495	Rhinopithecus_bieti
ENSMUSG00000020088	Sar1a	100	99.495	ENSRROG00000044164	SAR1A	100	99.495	Rhinopithecus_roxellana
ENSMUSG00000020088	Sar1a	100	99.495	ENSSBOG00000036189	SAR1A	100	99.495	Saimiri_boliviensis_boliviensis
ENSMUSG00000020088	Sar1a	100	98.473	ENSSHAG00000008596	SAR1A	100	96.970	Sarcophilus_harrisii
ENSMUSG00000020088	Sar1a	100	99.237	ENSSARG00000000951	SAR1A	100	98.485	Sorex_araneus
ENSMUSG00000020088	Sar1a	100	99.495	ENSSSCG00000010260	SAR1A	100	99.495	Sus_scrofa
ENSMUSG00000020088	Sar1a	100	99.237	ENSTGUG00000004523	SAR1A	100	97.475	Taeniopygia_guttata
ENSMUSG00000020088	Sar1a	100	100.000	ENSTBEG00000008657	SAR1A	100	100.000	Tupaia_belangeri
ENSMUSG00000020088	Sar1a	100	98.990	ENSTTRG00000006648	SAR1A	100	98.990	Tursiops_truncatus
ENSMUSG00000020088	Sar1a	100	99.495	ENSUAMG00000003779	SAR1A	100	99.495	Ursus_americanus
ENSMUSG00000020088	Sar1a	100	99.495	ENSUMAG00000007921	SAR1A	100	99.495	Ursus_maritimus
ENSMUSG00000020088	Sar1a	100	99.495	ENSVPAG00000002631	SAR1A	100	99.495	Vicugna_pacos
ENSMUSG00000020088	Sar1a	100	99.495	ENSVVUG00000021609	SAR1A	100	99.495	Vulpes_vulpes
ENSMUSG00000020088	Sar1a	100	98.473	ENSXETG00000026979	sar1a	100	96.970	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003400	regulation of COPII vesicle coating	21873635.	IBA	Process
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005783	endoplasmic reticulum	14728599.	IDA	Component
GO:0005794	Golgi apparatus	20086016.	IDA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006888	ER to Golgi vesicle-mediated transport	21873635.	IBA	Process
GO:0015031	protein transport	-	IEA	Process
GO:0016050	vesicle organization	21873635.	IBA	Process
GO:0016192	vesicle-mediated transport	14728599.	IDA	Process
GO:0016529	sarcoplasmic reticulum	14728599.	IDA	Component
GO:0030127	COPII vesicle coat	21873635.	IBA	Component
GO:0030127	COPII vesicle coat	-	ISO	Component
GO:0061024	membrane organization	21873635.	IBA	Process
GO:0070863	positive regulation of protein exit from endoplasmic reticulum	21873635.	IBA	Process
GO:0070971	endoplasmic reticulum exit site	21873635.	IBA	Component
GO:0090110	cargo loading into COPII-coated vesicle	-	ISO	Process
GO:1901301	regulation of cargo loading into COPII-coated vesicle	19966784.	IMP	Process
GO:1901303	negative regulation of cargo loading into COPII-coated vesicle	23580231.	IDA	Process