EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020173 (Gene tree)
Gene ID: 12808
Gene Symbol: Cobl
Alias: C530045F18Rik
Full Name: cordon-bleu WH2 repeat
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 228353
Position: chr11: 12236608-12464960
Accession: 105056
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000136549	-	640	-	ENSMUSP00000114779	159 (aa)	-	F6ZEZ1
ENSMUST00000172919	-	2566	-	ENSMUSP00000133669	349 (aa)	-	Q5NBX1
ENSMUST00000174874	-	5451	-	ENSMUSP00000133470	1330 (aa)	-	G3UWY3
ENSMUST00000146067	-	648	-	ENSMUSP00000119008	216 (aa)	-	F6RR81
ENSMUST00000046755	-	5615	XM_006514481	ENSMUSP00000045693	1337 (aa)	XP_006514544	Q5NBX1
ENSMUST00000130572	-	3463	-	-	- (aa)	-	-
ENSMUST00000109650	-	5271	XM_006514485	ENSMUSP00000105277	1255 (aa)	XP_006514548	Q5NBX1
ENSMUST00000109651	-	5541	XM_011243654	ENSMUSP00000105278	1312 (aa)	XP_011241956	G5E8P4
ENSMUST00000172827	-	625	-	ENSMUSP00000133368	208 (aa)	-	G3UWP1
ENSMUST00000172956	-	4488	-	ENSMUSP00000134372	410 (aa)	-	G3UZ73

Gene Model

Click here to download ENSMUSG00000020173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020173's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000578	embryonic axis specification	7586755.	IEP	Process
GO:0001726	ruffle	17956734.	IDA	Component
GO:0001757	somite specification	7586755.	IEP	Process
GO:0001843	neural tube closure	14512015.	IGI	Process
GO:0001889	liver development	7586755.	IEP	Process
GO:0003779	actin binding	-	IEA	Function
GO:0003785	actin monomer binding	17956734.	IDA	Function
GO:0005515	protein binding	17956734.21725280.26334624.	IPI	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005884	actin filament	17956734.	IDA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005938	cell cortex	21725280.	IDA	Component
GO:0005938	cell cortex	-	ISO	Component
GO:0016020	membrane	21725280.	IDA	Component
GO:0030041	actin filament polymerization	17956734.	IMP	Process
GO:0030424	axon	17956734.	IDA	Component
GO:0030425	dendrite	17956734.	IDA	Component
GO:0030903	notochord development	7586755.	IEP	Process
GO:0033504	floor plate development	7586755.	IEP	Process
GO:0042995	cell projection	-	IEA	Component
GO:0043025	neuronal cell body	17956734.	IDA	Component
GO:0044294	dendritic growth cone	17956734.	IDA	Component
GO:0044295	axonal growth cone	17956734.	IDA	Component
GO:0048471	perinuclear region of cytoplasm	21725280.	IDA	Component
GO:0048565	digestive tract development	7586755.	IEP	Process
GO:0048669	collateral sprouting in absence of injury	17956734.	IMP	Process
GO:0051639	actin filament network formation	17956734.	IDA	Process
GO:0051764	actin crosslink formation	17956734.	NAS	Process
GO:1900006	positive regulation of dendrite development	21725280.	IDA	Process
GO:1900029	positive regulation of ruffle assembly	17956734.	IDA	Process
GO:1990357	terminal web	22114352.	IDA	Component