EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020224 (Gene tree)
Gene ID: 66225
Gene Symbol: Llph
Alias: 1190005P17Rik
Full Name: LLP homolog%2C long-term synaptic facilitation (Aplysia)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 5513
Position: chr10: 120227070-120232582
Accession: 1913475
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000130198	-	1463	XM_006513954	ENSMUSP00000118254	130 (aa)	XP_006514017	Q9D945
ENSMUST00000020444	-	1664	-	ENSMUSP00000020444	130 (aa)	-	Q9D945
ENSMUST00000220107	-	767	-	ENSMUSP00000151942	76 (aa)	-	A0A1W2P865

Gene Model

Click here to download ENSMUSG00000020224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020224's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020224	Llph	100	78.519	ENSG00000139233	LLPH	100	78.519	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001099	basal RNA polymerase II transcription machinery binding	21873635.	IBA	Function
GO:0001099	basal RNA polymerase II transcription machinery binding	26961175.	IDA	Function
GO:0005515	protein binding	26961175.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005694	chromosome	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	26961175.	IDA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0060999	positive regulation of dendritic spine development	26961175.	IMP	Process
GO:0097484	dendrite extension	21873635.	IBA	Process
GO:0097484	dendrite extension	26961175.	IMP	Process