EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000020329 (Gene tree)
Gene ID
216151
Gene Symbol
Polrmt
Alias
1110018N15Rik
Full Name
polymerase (RNA) mitochondrial (DNA directed)
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
10459 bases
Position
chr10:79736123-79746581
Accession
1915843
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000124936RNA_polPF00940.197e-16711
ENSMUSP00000020580RNA_polPF00940.198.2e-16711
ENSMUSP00000124230RNA_polPF00940.193.5e-13412
ENSMUSP00000124230RNA_polPF00940.193.5e-13422
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000161375-411--- (aa)--
ENSMUST00000160838-652--- (aa)--
ENSMUST00000160595-374--- (aa)--
ENSMUST00000159082-3935--- (aa)--
ENSMUST00000161765-4288--- (aa)--
ENSMUST00000161662-1287-ENSMUSP00000124230393 (aa)-F6TLB0
ENSMUST00000162694-3749-ENSMUSP00000124556903 (aa)-E0CY15
ENSMUST00000162679-602--- (aa)--
ENSMUST00000162687-1218--- (aa)--
ENSMUST00000159289-395--- (aa)--
ENSMUST00000159016-3535-ENSMUSP000001249361133 (aa)-E9PWD9
ENSMUST00000161098-702--- (aa)--
ENSMUST00000020580-3755-ENSMUSP000000205801207 (aa)-Q8BKF1
Gene Model
Click here to download ENSMUSG00000020329's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020329's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000020329Polrmt10079.388ENSG00000099821POLRMT9479.388Homo_sapiens
ENSMUSG00000020329Polrmt9961.663ENSAPOG00000003942polrmt7562.857Acanthochromis_polyacanthus
ENSMUSG00000020329Polrmt10078.720ENSAMEG00000002745POLRMT9478.720Ailuropoda_melanoleuca
ENSMUSG00000020329Polrmt9961.201ENSACIG00000016078polrmt9562.381Amphilophus_citrinellus
ENSMUSG00000020329Polrmt9962.299ENSAOCG00000020208polrmt9456.944Amphiprion_ocellaris
ENSMUSG00000020329Polrmt9962.529ENSAPEG00000007949polrmt9256.250Amphiprion_percula
ENSMUSG00000020329Polrmt9962.125ENSATEG00000024025polrmt9162.379Anabas_testudineus
ENSMUSG00000020329Polrmt9961.111ENSAPLG00000003051POLRMT9665.008Anas_platyrhynchos
ENSMUSG00000020329Polrmt9976.167ENSANAG00000032916POLRMT9476.167Aotus_nancymaae
ENSMUSG00000020329Polrmt9962.356ENSACLG00000003766polrmt7663.175Astatotilapia_calliptera
ENSMUSG00000020329Polrmt9961.587ENSAMXG00000018258polrmt9161.587Astyanax_mexicanus
ENSMUSG00000020329Polrmt10078.060ENSBTAG00000015051POLRMT9678.060Bos_taurus
ENSMUSG00000020329Polrmt9940.136WBGene00013680rpom-15341.600Caenorhabditis_elegans
ENSMUSG00000020329Polrmt9974.879ENSCJAG00000012913POLRMT9474.879Callithrix_jacchus
ENSMUSG00000020329Polrmt10078.871ENSCAFG00000019711POLRMT9478.871Canis_familiaris
ENSMUSG00000020329Polrmt10078.871ENSCAFG00020016843POLRMT9478.871Canis_lupus_dingo
ENSMUSG00000020329Polrmt10078.296ENSCHIG00000013267POLRMT9478.296Capra_hircus
ENSMUSG00000020329Polrmt9471.914ENSCAPG00000016900POLRMT10071.914Cavia_aperea
ENSMUSG00000020329Polrmt10073.548ENSCPOG00000023061POLRMT10061.266Cavia_porcellus
ENSMUSG00000020329Polrmt10075.362ENSCCAG00000025014POLRMT9475.362Cebus_capucinus
ENSMUSG00000020329Polrmt10078.744ENSCATG00000040393POLRMT9478.744Cercocebus_atys
ENSMUSG00000020329Polrmt9676.613ENSCLAG00000007473POLRMT7876.613Chinchilla_lanigera
ENSMUSG00000020329Polrmt10078.583ENSCSAG00000012942POLRMT9478.583Chlorocebus_sabaeus
ENSMUSG00000020329Polrmt9666.186ENSCPBG00000009869POLRMT9665.323Chrysemys_picta_bellii
ENSMUSG00000020329Polrmt6249.194ENSCING00000024450-10049.597Ciona_intestinalis
ENSMUSG00000020329Polrmt9947.344ENSCSAVG00000000440-9944.064Ciona_savignyi
ENSMUSG00000020329Polrmt10077.939ENSCANG00000038011POLRMT9477.939Colobus_angolensis_palliatus
ENSMUSG00000020329Polrmt10082.996ENSCGRG00001021311Polrmt10084.992Cricetulus_griseus_chok1gshd
ENSMUSG00000020329Polrmt10082.727ENSCGRG00000011134Polrmt10082.119Cricetulus_griseus_crigri
ENSMUSG00000020329Polrmt9960.970ENSCSEG00000002734polrmt7662.963Cynoglossus_semilaevis
ENSMUSG00000020329Polrmt9961.201ENSCVAG00000005949polrmt9757.081Cyprinodon_variegatus
ENSMUSG00000020329Polrmt9763.141ENSDARG00000101220polrmt9163.141Danio_rerio
ENSMUSG00000020329Polrmt9975.193ENSDORG00000014125Polrmt9977.597Dipodomys_ordii
ENSMUSG00000020329Polrmt9953.899FBgn0261938mtRNApol7255.821Drosophila_melanogaster
ENSMUSG00000020329Polrmt10070.579ENSETEG00000003476POLRMT9470.579Echinops_telfairi
ENSMUSG00000020329Polrmt9959.584ENSEBUG00000013453-9159.330Eptatretus_burgeri
ENSMUSG00000020329Polrmt10081.059ENSEASG00005021493POLRMT9481.059Equus_asinus_asinus
ENSMUSG00000020329Polrmt10081.059ENSECAG00000032711POLRMT9481.059Equus_caballus
ENSMUSG00000020329Polrmt9960.641ENSELUG00000019319polrmt7652.724Esox_lucius
ENSMUSG00000020329Polrmt10080.769ENSFCAG00000018808POLRMT9480.769Felis_catus
ENSMUSG00000020329Polrmt8065.226ENSFALG00000013910POLRMT9665.226Ficedula_albicollis
ENSMUSG00000020329Polrmt10075.484ENSFDAG00000020312POLRMT9475.484Fukomys_damarensis
ENSMUSG00000020329Polrmt9961.111ENSFHEG00000021239polrmt8656.792Fundulus_heteroclitus
ENSMUSG00000020329Polrmt9956.221ENSGMOG00000011829polrmt9760.640Gadus_morhua
ENSMUSG00000020329Polrmt9961.894ENSGALG00000001377POLRMT9365.169Gallus_gallus
ENSMUSG00000020329Polrmt9962.299ENSGAFG00000003953polrmt9558.665Gambusia_affinis
ENSMUSG00000020329Polrmt9957.834ENSGACG00000012957polrmt9260.450Gasterosteus_aculeatus
ENSMUSG00000020329Polrmt9962.356ENSGAGG00000005522POLRMT9665.705Gopherus_agassizii
ENSMUSG00000020329Polrmt8182.609ENSGGOG00000023264-9582.609Gorilla_gorilla
ENSMUSG00000020329Polrmt9962.356ENSHBUG00000010005polrmt7463.333Haplochromis_burtoni
ENSMUSG00000020329Polrmt9972.517ENSHGLG00000019286POLRMT8768.996Heterocephalus_glaber_female
ENSMUSG00000020329Polrmt10075.968ENSHGLG00100005762POLRMT10063.230Heterocephalus_glaber_male
ENSMUSG00000020329Polrmt9960.739ENSHCOG00000001565polrmt9465.358Hippocampus_comes
ENSMUSG00000020329Polrmt9961.201ENSIPUG00000000789polrmt9548.718Ictalurus_punctatus
ENSMUSG00000020329Polrmt9882.747ENSSTOG00000003431POLRMT10082.997Ictidomys_tridecemlineatus
ENSMUSG00000020329Polrmt9976.935ENSJJAG00000012916Polrmt9976.726Jaculus_jaculus
ENSMUSG00000020329Polrmt9960.230ENSKMAG00000004426polrmt9260.759Kryptolebias_marmoratus
ENSMUSG00000020329Polrmt9962.125ENSLBEG00000016529polrmt7463.016Labrus_bergylta
ENSMUSG00000020329Polrmt9961.432ENSLACG00000011518POLRMT9563.275Latimeria_chalumnae
ENSMUSG00000020329Polrmt9952.690ENSLOCG00000005222polrmt9152.690Lepisosteus_oculatus
ENSMUSG00000020329Polrmt9977.885ENSLAFG00000001860POLRMT9477.885Loxodonta_africana
ENSMUSG00000020329Polrmt10079.066ENSMFAG00000031466POLRMT9479.066Macaca_fascicularis
ENSMUSG00000020329Polrmt10078.744ENSMNEG00000039129POLRMT9478.744Macaca_nemestrina
ENSMUSG00000020329Polrmt8285.366ENSMLEG00000037404POLRMT9979.552Mandrillus_leucophaeus
ENSMUSG00000020329Polrmt9962.125ENSMAMG00000019284polrmt7563.141Mastacembelus_armatus
ENSMUSG00000020329Polrmt9962.356ENSMZEG00005009932polrmt7663.175Maylandia_zebra
ENSMUSG00000020329Polrmt9664.687ENSMGAG00000003243POLRMT9664.848Meleagris_gallopavo
ENSMUSG00000020329Polrmt10088.443ENSMAUG00000019392Polrmt10088.443Mesocricetus_auratus
ENSMUSG00000020329Polrmt10080.806ENSMICG00000016701POLRMT9480.806Microcebus_murinus
ENSMUSG00000020329Polrmt10085.304ENSMOCG00000008868Polrmt10080.281Microtus_ochrogaster
ENSMUSG00000020329Polrmt8957.895ENSMMOG00000000705polrmt7357.895Mola_mola
ENSMUSG00000020329Polrmt9966.613ENSMODG00000006478POLRMT9566.613Monodelphis_domestica
ENSMUSG00000020329Polrmt9960.970ENSMALG00000021224polrmt7463.607Monopterus_albus
ENSMUSG00000020329Polrmt10097.753MGP_CAROLIEiJ_G0015538Polrmt10097.753Mus_caroli
ENSMUSG00000020329Polrmt9995.663MGP_PahariEiJ_G0030951Polrmt10096.148Mus_pahari
ENSMUSG00000020329Polrmt10099.337MGP_SPRETEiJ_G0016356Polrmt10099.490Mus_spretus
ENSMUSG00000020329Polrmt10078.710ENSMPUG00000009910POLRMT9478.710Mustela_putorius_furo
ENSMUSG00000020329Polrmt10080.000ENSMLUG00000009223POLRMT9480.000Myotis_lucifugus
ENSMUSG00000020329Polrmt10087.801ENSNGAG00000005498Polrmt10088.065Nannospalax_galili
ENSMUSG00000020329Polrmt9762.470ENSNBRG00000023530polrmt7365.653Neolamprologus_brichardi
ENSMUSG00000020329Polrmt9971.429ENSNLEG00000000718POLRMT10065.726Nomascus_leucogenys
ENSMUSG00000020329Polrmt8474.595ENSOPRG00000013579POLRMT6877.806Ochotona_princeps
ENSMUSG00000020329Polrmt9962.125ENSONIG00000002405polrmt9763.462Oreochromis_niloticus
ENSMUSG00000020329Polrmt9962.673ENSORLG00000004329polrmt9063.074Oryzias_latipes
ENSMUSG00000020329Polrmt9962.442ENSORLG00020003896polrmt9264.467Oryzias_latipes_hni
ENSMUSG00000020329Polrmt9962.442ENSORLG00015022238polrmt9063.074Oryzias_latipes_hsok
ENSMUSG00000020329Polrmt9963.048ENSOMEG00000008292polrmt9263.968Oryzias_melastigma
ENSMUSG00000020329Polrmt10081.701ENSOGAG00000007912POLRMT9481.701Otolemur_garnettii
ENSMUSG00000020329Polrmt9969.615ENSOARG00000008898POLRMT10054.988Ovis_aries
ENSMUSG00000020329Polrmt9975.684ENSPPAG00000043321-9375.684Pan_paniscus
ENSMUSG00000020329Polrmt10076.726ENSPPAG00000030853POLRMT9476.726Pan_paniscus
ENSMUSG00000020329Polrmt9972.414ENSPPRG00000001547POLRMT9378.910Panthera_pardus
ENSMUSG00000020329Polrmt10077.456ENSPTRG00000010157POLRMT9077.456Pan_troglodytes
ENSMUSG00000020329Polrmt9976.006ENSPTRG00000039638-9476.006Pan_troglodytes
ENSMUSG00000020329Polrmt10078.744ENSPANG00000006649POLRMT9478.744Papio_anubis
ENSMUSG00000020329Polrmt9960.508ENSPKIG00000024580polrmt9262.222Paramormyrops_kingsleyae
ENSMUSG00000020329Polrmt9960.739ENSPMGG00000014627polrmt8462.063Periophthalmus_magnuspinnatus
ENSMUSG00000020329Polrmt10089.516ENSPEMG00000011671Polrmt10089.246Peromyscus_maniculatus_bairdii
ENSMUSG00000020329Polrmt7065.319ENSPMAG00000005070-10065.319Petromyzon_marinus
ENSMUSG00000020329Polrmt10066.238ENSPCIG00000006103POLRMT9666.238Phascolarctos_cinereus
ENSMUSG00000020329Polrmt9961.609ENSPFOG00000003911polrmt10057.787Poecilia_formosa
ENSMUSG00000020329Polrmt8459.455ENSPLAG00000005743polrmt9359.455Poecilia_latipinna
ENSMUSG00000020329Polrmt9961.201ENSPMEG00000008947polrmt9858.262Poecilia_mexicana
ENSMUSG00000020329Polrmt9240.044ENSPMEG00000011484polrmt9552.455Poecilia_mexicana
ENSMUSG00000020329Polrmt9961.839ENSPREG00000007650polrmt9557.480Poecilia_reticulata
ENSMUSG00000020329Polrmt9379.016ENSPPYG00000009282POLRMT10075.833Pongo_abelii
ENSMUSG00000020329Polrmt10064.791ENSPCAG00000010816POLRMT10058.999Procavia_capensis
ENSMUSG00000020329Polrmt10075.000ENSPCOG00000014539POLRMT9475.000Propithecus_coquereli
ENSMUSG00000020329Polrmt10077.456ENSPVAG00000008403POLRMT9477.456Pteropus_vampyrus
ENSMUSG00000020329Polrmt9962.356ENSPNYG00000020790polrmt7463.175Pundamilia_nyererei
ENSMUSG00000020329Polrmt9961.201ENSPNAG00000019790polrmt9065.358Pygocentrus_nattereri
ENSMUSG00000020329Polrmt10089.064ENSRNOG00000024879Polrmt10089.064Rattus_norvegicus
ENSMUSG00000020329Polrmt10078.100ENSRBIG00000006728POLRMT9478.100Rhinopithecus_bieti
ENSMUSG00000020329Polrmt10078.261ENSRROG00000040809POLRMT9478.261Rhinopithecus_roxellana
ENSMUSG00000020329Polrmt9974.557ENSSBOG00000025388POLRMT9474.557Saimiri_boliviensis_boliviensis
ENSMUSG00000020329Polrmt9960.460ENSSHAG00000009387-10059.041Sarcophilus_harrisii
ENSMUSG00000020329Polrmt9961.432ENSSFOG00015005074polrmt9663.233Scleropages_formosus
ENSMUSG00000020329Polrmt9961.697ENSSMAG00000011851polrmt7462.875Scophthalmus_maximus
ENSMUSG00000020329Polrmt9961.663ENSSDUG00000004410polrmt9361.587Seriola_dumerili
ENSMUSG00000020329Polrmt9961.432ENSSLDG00000010643polrmt9361.746Seriola_lalandi_dorsalis
ENSMUSG00000020329Polrmt7058.845ENSSPUG00000009181-10059.233Sphenodon_punctatus
ENSMUSG00000020329Polrmt9962.356ENSSPAG00000018740polrmt7563.942Stegastes_partitus
ENSMUSG00000020329Polrmt10077.316ENSSSCG00000035693POLRMT9477.316Sus_scrofa
ENSMUSG00000020329Polrmt9962.673ENSTGUG00000000621POLRMT10063.497Taeniopygia_guttata
ENSMUSG00000020329Polrmt9960.046ENSTRUG00000018040polrmt9164.200Takifugu_rubripes
ENSMUSG00000020329Polrmt9961.785ENSTNIG00000010642polrmt9362.780Tetraodon_nigroviridis
ENSMUSG00000020329Polrmt6767.828ENSTBEG00000001819-8981.765Tupaia_belangeri
ENSMUSG00000020329Polrmt7574.184ENSTTRG00000011329POLRMT6579.529Tursiops_truncatus
ENSMUSG00000020329Polrmt10079.839ENSUAMG00000019616POLRMT9381.967Ursus_americanus
ENSMUSG00000020329Polrmt9673.548ENSVVUG00000022627POLRMT9273.548Vulpes_vulpes
ENSMUSG00000020329Polrmt9765.120ENSXETG00000006545polrmt9165.120Xenopus_tropicalis
ENSMUSG00000020329Polrmt9962.125ENSXMAG00000012464polrmt9263.016Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001018mitochondrial promoter sequence-specific DNA binding21873635.IBAFunction
GO:0003677DNA binding-IEAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity21873635.IBAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity-ISOFunction
GO:0005515protein binding23283301.IPIFunction
GO:0005739mitochondrion14651853.18614015.HDAComponent
GO:0005739mitochondrion-ISOComponent
GO:0005759mitochondrial matrix-ISOComponent
GO:0006351transcription, DNA-templated-IEAProcess
GO:0006390mitochondrial transcription21873635.IBAProcess
GO:0006390mitochondrial transcription-ISOProcess
GO:0016740transferase activity-IEAFunction
GO:0016779nucleotidyltransferase activity-IEAFunction
GO:0032991protein-containing complex23283301.IDAComponent
GO:0032991protein-containing complex-ISOComponent
GO:0034245mitochondrial DNA-directed RNA polymerase complex21873635.IBAComponent
GO:0042645mitochondrial nucleoid-ISOComponent
GO:0043565sequence-specific DNA binding23283301.IDAFunction
GO:0043565sequence-specific DNA binding-ISOFunction

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