EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020364 (Gene tree)
Gene ID: 21408
Gene Symbol: Zfp354a
Alias: Tcf17|kid1
Full Name: zinc finger protein 354A
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 13543 bases
Position: chr11:51059257-51072799
Accession: 103172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	1	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	2	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	3	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	4	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	5	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	6	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	7	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	8	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	9	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	10	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	11	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	12	13
ENSMUSP00000104750	zf-C2H2	PF00096.26	2.1e-67	13	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	1	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	2	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	3	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	4	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	5	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	6	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	7	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	8	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	9	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	10	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	11	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	12	13
ENSMUSP00000020628	zf-C2H2	PF00096.26	2.2e-67	13	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	1	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	2	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	3	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	4	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	5	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	6	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	7	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	8	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	9	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	10	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	11	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	12	13
ENSMUSP00000099827	zf-C2H2	PF00096.26	2.2e-67	13	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	1	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	2	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	3	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	4	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	5	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	6	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	7	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	8	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	9	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	10	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	11	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	12	13
ENSMUSP00000104747	zf-C2H2	PF00096.26	2.3e-67	13	13
ENSMUSP00000104750	zf-met	PF12874.7	5.9e-06	1	1
ENSMUSP00000020628	zf-met	PF12874.7	6e-06	1	1
ENSMUSP00000099827	zf-met	PF12874.7	6e-06	1	1
ENSMUSP00000104747	zf-met	PF12874.7	6.1e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000109119	-	2078	XM_006532787	ENSMUSP00000104747	573 (aa)	XP_006532850	B1ATG3
ENSMUST00000156914	-	430	-	-	- (aa)	-	-
ENSMUST00000102766	-	2592	XM_006532790	ENSMUSP00000099827	572 (aa)	XP_006532853	Q61751
ENSMUST00000109122	-	4165	XM_011248885	ENSMUSP00000104750	571 (aa)	XP_011247187	Q5PPR4
ENSMUST00000020628	-	1719	-	ENSMUSP00000020628	572 (aa)	-	Q61751

Gene Model

Click here to download ENSMUSG00000020364's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000020364	Zfp354a	72	56.927	ENSMUSG00000058402	Zfp420	99	56.327
ENSMUSG00000020364	Zfp354a	68	56.471	ENSMUSG00000047371	Zfp768	55	50.000
ENSMUSG00000020364	Zfp354a	98	44.250	ENSMUSG00000095432	Zfp748	99	48.849
ENSMUSG00000020364	Zfp354a	98	43.728	ENSMUSG00000030823	9130019O22Rik	90	43.728
ENSMUSG00000020364	Zfp354a	98	49.052	ENSMUSG00000047603	Zfp235	99	48.115
ENSMUSG00000020364	Zfp354a	98	50.209	ENSMUSG00000087598	Zfp111	99	51.499
ENSMUSG00000020364	Zfp354a	98	45.455	ENSMUSG00000030486	Zfp108	99	45.455
ENSMUSG00000020364	Zfp354a	99	46.954	ENSMUSG00000114923	Gm49345	99	50.378
ENSMUSG00000020364	Zfp354a	100	48.111	ENSMUSG00000012640	Zfp715	96	48.111
ENSMUSG00000020364	Zfp354a	98	48.413	ENSMUSG00000074472	Zfp872	99	48.072
ENSMUSG00000020364	Zfp354a	85	54.743	ENSMUSG00000091474	2610021A01Rik	65	51.637
ENSMUSG00000020364	Zfp354a	70	40.000	ENSMUSG00000049755	Zfp672	99	42.500
ENSMUSG00000020364	Zfp354a	98	48.120	ENSMUSG00000057396	Zfp759	99	48.120
ENSMUSG00000020364	Zfp354a	98	49.869	ENSMUSG00000023892	Zfp51	94	49.869
ENSMUSG00000020364	Zfp354a	99	46.814	ENSMUSG00000062743	Zfp677	99	48.551
ENSMUSG00000020364	Zfp354a	98	47.674	ENSMUSG00000089857	Zfp882	99	47.674
ENSMUSG00000020364	Zfp354a	98	53.909	ENSMUSG00000034800	Zfp661	95	53.909
ENSMUSG00000020364	Zfp354a	98	51.709	ENSMUSG00000050605	Zfp61	98	51.709
ENSMUSG00000020364	Zfp354a	99	46.798	ENSMUSG00000059142	Zfp945	99	46.667
ENSMUSG00000020364	Zfp354a	99	52.381	ENSMUSG00000074824	Rslcan18	83	52.381
ENSMUSG00000020364	Zfp354a	97	51.829	ENSMUSG00000092416	Zfp141	98	47.978
ENSMUSG00000020364	Zfp354a	80	41.214	ENSMUSG00000023902	Zscan10	79	41.214
ENSMUSG00000020364	Zfp354a	98	55.598	ENSMUSG00000069743	Zfp820	97	55.598
ENSMUSG00000020364	Zfp354a	98	51.385	ENSMUSG00000056019	Zfp709	99	51.385
ENSMUSG00000020364	Zfp354a	98	44.898	ENSMUSG00000054519	Zfp867	96	48.986
ENSMUSG00000020364	Zfp354a	73	51.648	ENSMUSG00000070709	Zfp974	99	47.397
ENSMUSG00000020364	Zfp354a	98	47.115	ENSMUSG00000055305	Zfp93	99	47.115
ENSMUSG00000020364	Zfp354a	100	42.390	ENSMUSG00000022526	Zfp251	97	48.603
ENSMUSG00000020364	Zfp354a	99	47.464	ENSMUSG00000017667	Zfp334	99	47.464
ENSMUSG00000020364	Zfp354a	98	46.429	ENSMUSG00000057551	Zfp317	94	46.263
ENSMUSG00000020364	Zfp354a	98	46.667	ENSMUSG00000074282	Zfp94	99	45.669
ENSMUSG00000020364	Zfp354a	100	51.646	ENSMUSG00000063108	Zfp26	91	51.646
ENSMUSG00000020364	Zfp354a	98	50.000	ENSMUSG00000052675	Zfp112	99	49.591
ENSMUSG00000020364	Zfp354a	98	49.138	ENSMUSG00000068962	Zfp114	99	49.138
ENSMUSG00000020364	Zfp354a	100	50.970	ENSMUSG00000048728	Zfp454	100	48.343

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020364	Zfp354a	100	83.421	ENSCAFG00020003589	-	99	84.035	Canis_lupus_dingo
ENSMUSG00000020364	Zfp354a	100	78.017	ENSTSYG00000008405	-	100	78.017	Carlito_syrichta
ENSMUSG00000020364	Zfp354a	100	76.789	ENSCAPG00000013118	-	99	77.719	Cavia_aperea
ENSMUSG00000020364	Zfp354a	99	82.312	ENSCPOG00000034791	-	99	82.312	Cavia_porcellus
ENSMUSG00000020364	Zfp354a	97	81.495	ENSCLAG00000014648	-	100	81.495	Chinchilla_lanigera
ENSMUSG00000020364	Zfp354a	91	80.996	ENSCHOG00000008173	-	91	80.996	Choloepus_hoffmanni
ENSMUSG00000020364	Zfp354a	72	94.704	ENSCHOG00000003898	-	100	94.704	Choloepus_hoffmanni
ENSMUSG00000020364	Zfp354a	99	91.783	ENSCGRG00001021088	Zfp354a	100	91.724	Cricetulus_griseus_chok1gshd
ENSMUSG00000020364	Zfp354a	99	91.783	ENSCGRG00000015037	Zfp354a	100	91.724	Cricetulus_griseus_crigri
ENSMUSG00000020364	Zfp354a	77	95.619	ENSDNOG00000043806	-	100	95.619	Dasypus_novemcinctus
ENSMUSG00000020364	Zfp354a	99	84.331	ENSDORG00000009396	Zfp354a	100	84.138	Dipodomys_ordii
ENSMUSG00000020364	Zfp354a	84	78.208	ENSETEG00000020249	-	99	78.208	Echinops_telfairi
ENSMUSG00000020364	Zfp354a	85	80.426	ENSEEUG00000008362	-	99	80.426	Erinaceus_europaeus
ENSMUSG00000020364	Zfp354a	99	82.373	ENSFDAG00000015190	-	100	82.373	Fukomys_damarensis
ENSMUSG00000020364	Zfp354a	100	82.087	ENSHGLG00000005975	-	100	82.087	Heterocephalus_glaber_female
ENSMUSG00000020364	Zfp354a	85	83.436	ENSHGLG00100012284	-	100	83.436	Heterocephalus_glaber_male
ENSMUSG00000020364	Zfp354a	84	84.553	ENSSTOG00000024118	-	96	84.553	Ictidomys_tridecemlineatus
ENSMUSG00000020364	Zfp354a	84	80.556	ENSLAFG00000002909	-	100	80.556	Loxodonta_africana
ENSMUSG00000020364	Zfp354a	85	91.129	ENSMAUG00000000735	Zfp354a	94	91.129	Mesocricetus_auratus
ENSMUSG00000020364	Zfp354a	99	80.795	ENSMICG00000006390	ZNF354A	100	80.795	Microcebus_murinus
ENSMUSG00000020364	Zfp354a	99	90.052	ENSMOCG00000003692	Zfp354a	100	89.446	Microtus_ochrogaster
ENSMUSG00000020364	Zfp354a	100	98.080	MGP_CAROLIEiJ_G0016306	Zfp354a	100	98.080	Mus_caroli
ENSMUSG00000020364	Zfp354a	100	96.335	MGP_PahariEiJ_G0017441	Zfp354a	100	96.335	Mus_pahari
ENSMUSG00000020364	Zfp354a	99	85.689	ENSNGAG00000011769	Zfp354a	100	85.689	Nannospalax_galili
ENSMUSG00000020364	Zfp354a	90	83.398	ENSODEG00000008278	-	100	83.398	Octodon_degus
ENSMUSG00000020364	Zfp354a	98	82.997	ENSPPAG00000039371	ZNF354A	100	82.997	Pan_paniscus
ENSMUSG00000020364	Zfp354a	85	83.172	ENSPTRG00000017606	ZNF354A	97	80.464	Pan_troglodytes
ENSMUSG00000020364	Zfp354a	100	89.483	ENSPEMG00000024167	Zfp354a	100	89.483	Peromyscus_maniculatus_bairdii
ENSMUSG00000020364	Zfp354a	85	84.867	ENSUAMG00000000212	-	90	84.867	Ursus_americanus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003700	DNA-binding transcription factor activity	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007576	nucleolar fragmentation	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function