EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020372 (Gene tree)
Gene ID: 14694
Gene Symbol: Rack1
Alias: GB-like|Gnb2-rs1|Gnb2l1|p205
Full Name: receptor for activated C kinase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 6103
Position: chr11: 48800332-48806434
Accession: 101849
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000139959	-	1542	-	-	- (aa)	-	-
ENSMUST00000125166	-	637	-	-	- (aa)	-	-
ENSMUST00000136849	-	322	-	-	- (aa)	-	-
ENSMUST00000136703	-	766	-	-	- (aa)	-	-
ENSMUST00000020640	-	1447	-	ENSMUSP00000020640	317 (aa)	-	P68040
ENSMUST00000142269	-	4456	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000020372's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05162	Measles	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020372's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020372	Rack1	99	72.188	WBGene00010556	rack-1	98	72.188	Caenorhabditis_elegans
ENSMUSG00000020372	Rack1	99	77.143	FBgn0020618	Rack1	99	77.143	Drosophila_melanogaster
ENSMUSG00000020372	Rack1	100	100.000	ENSG00000204628	RACK1	100	100.000	Homo_sapiens
ENSMUSG00000020372	Rack1	98	53.822	YMR116C	ASC1	97	53.822	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001891	phagocytic cup	-	ISO	Component
GO:0001934	positive regulation of protein phosphorylation	21873635.	IBA	Process
GO:0001934	positive regulation of protein phosphorylation	-	ISO	Process
GO:0005080	protein kinase C binding	21873635.	IBA	Function
GO:0005080	protein kinase C binding	11099474.	ISO	Function
GO:0005515	protein binding	15102471.18258429.21262816.24947010.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	12826667.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0006412	translation	23212600.	IMP	Process
GO:0006417	regulation of translation	-	IEA	Process
GO:0006915	apoptotic process	-	IEA	Process
GO:0006919	activation of cysteine-type endopeptidase activity involved in apoptotic process	-	ISO	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007369	gastrulation	-	IEA	Process
GO:0008104	protein localization	11099474.	ISO	Process
GO:0008200	ion channel inhibitor activity	18258429.	IDA	Function
GO:0008656	cysteine-type endopeptidase activator activity involved in apoptotic process	-	ISO	Function
GO:0010629	negative regulation of gene expression	-	ISO	Process
GO:0015935	small ribosomal subunit	-	ISO	Component
GO:0016020	membrane	-	IEA	Component
GO:0016567	protein ubiquitination	-	ISO	Process
GO:0017148	negative regulation of translation	-	ISO	Process
GO:0019899	enzyme binding	21873635.	IBA	Function
GO:0019899	enzyme binding	-	ISO	Function
GO:0019903	protein phosphatase binding	-	ISO	Function
GO:0022627	cytosolic small ribosomal subunit	21873635.	IBA	Component
GO:0030292	protein tyrosine kinase inhibitor activity	-	ISO	Function
GO:0030308	negative regulation of cell growth	-	ISO	Process
GO:0030332	cyclin binding	-	ISO	Function
GO:0030335	positive regulation of cell migration	-	ISO	Process
GO:0030425	dendrite	16414032.	IDA	Component
GO:0030496	midbody	-	ISO	Component
GO:0030971	receptor tyrosine kinase binding	-	ISO	Function
GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0032464	positive regulation of protein homooligomerization	-	ISO	Process
GO:0033137	negative regulation of peptidyl-serine phosphorylation	-	ISO	Process
GO:0035556	intracellular signal transduction	11099474.	ISO	Process
GO:0035591	signaling adaptor activity	-	ISO	Function
GO:0038023	signaling receptor activity	11099474.	ISO	Function
GO:0040008	regulation of growth	-	IEA	Process
GO:0042169	SH2 domain binding	-	ISO	Function
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0042995	cell projection	-	IEA	Component
GO:0042998	positive regulation of Golgi to plasma membrane protein transport	-	ISO	Process
GO:0043005	neuron projection	24947010.	IDA	Component
GO:0043022	ribosome binding	21873635.	IBA	Function
GO:0043022	ribosome binding	-	ISO	Function
GO:0043025	neuronal cell body	16414032.	IDA	Component
GO:0043065	positive regulation of apoptotic process	-	ISO	Process
GO:0043473	pigmentation	23212600.	IMP	Process
GO:0043547	positive regulation of GTPase activity	-	ISO	Process
GO:0044297	cell body	24947010.	IDA	Component
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0048511	rhythmic process	-	IEA	Process
GO:0050765	negative regulation of phagocytosis	-	ISO	Process
GO:0051343	positive regulation of cyclic-nucleotide phosphodiesterase activity	-	ISO	Process
GO:0051726	regulation of cell cycle	-	ISO	Process
GO:0051898	negative regulation of protein kinase B signaling	-	ISO	Process
GO:0051901	positive regulation of mitochondrial depolarization	-	ISO	Process
GO:0071333	cellular response to glucose stimulus	-	ISO	Process
GO:0071363	cellular response to growth factor stimulus	-	ISO	Process
GO:0072344	rescue of stalled ribosome	21873635.	IBA	Process
GO:0072344	rescue of stalled ribosome	-	ISO	Process
GO:1903076	regulation of protein localization to plasma membrane	-	ISO	Process
GO:1903208	negative regulation of hydrogen peroxide-induced neuron death	24947010.	IGI	Process
GO:1903208	negative regulation of hydrogen peroxide-induced neuron death	-	ISO	Process
GO:1990630	IRE1-RACK1-PP2A complex	-	ISO	Component
GO:2001244	positive regulation of intrinsic apoptotic signaling pathway	-	ISO	Process