EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020389 (Gene tree)
Gene ID: 213084
Gene Symbol: Cdkl3
Alias: B230379H01Rik
Full Name: cyclin-dependent kinase-like 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 85564 bases
Position: chr11:52004221-52089784
Accession: 2388268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000117983	RIO1	PF01163.22	5.6e-05	1	1
ENSMUSP00000104704	RIO1	PF01163.22	0.0002	1	1
ENSMUSP00000104705	RIO1	PF01163.22	0.0002	1	1
ENSMUSP00000104706	RIO1	PF01163.22	0.00035	1	1
ENSMUSP00000065128	RIO1	PF01163.22	0.00045	1	1
ENSMUSP00000104707	RIO1	PF01163.22	0.00045	1	1
ENSMUSP00000104709	RIO1	PF01163.22	0.00045	1	1
ENSMUSP00000112477	RIO1	PF01163.22	0.00045	1	1
ENSMUSP00000104708	RIO1	PF01163.22	0.00047	1	1
ENSMUSP00000113303	RIO1	PF01163.22	0.00047	1	1
ENSMUSP00000064315	RIO1	PF01163.22	0.00048	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000063303	-	2765	-	ENSMUSP00000064315	595 (aa)	-	Q8BLF2
ENSMUST00000120374	-	2770	XM_006532767	ENSMUSP00000113303	610 (aa)	XP_006532830	B1AU43
ENSMUST00000109081	-	2063	XM_011248865	ENSMUSP00000104709	585 (aa)	XP_011247167	Q8BLF2
ENSMUST00000109080	-	2749	XM_006532769	ENSMUSP00000104708	610 (aa)	XP_006532832	B1AU43
ENSMUST00000147874	-	513	-	ENSMUSP00000119505	138 (aa)	-	F6RUB4
ENSMUST00000109078	-	2216	-	ENSMUSP00000104706	457 (aa)	-	Q8BLF2
ENSMUST00000109079	-	2051	-	ENSMUSP00000104707	581 (aa)	-	Q8BLF2
ENSMUST00000109076	-	1610	XM_017314422	ENSMUSP00000104704	353 (aa)	XP_017169911	Q8BLF2
ENSMUST00000109077	-	2605	-	ENSMUSP00000104705	353 (aa)	-	Q8BLF2
ENSMUST00000128853	-	1564	-	ENSMUSP00000121945	224 (aa)	-	F6RBI5
ENSMUST00000207272	-	392	-	ENSMUSP00000147107	50 (aa)	-	A0A140LJ75
ENSMUST00000150736	-	631	-	ENSMUSP00000118607	97 (aa)	-	F6ULF3
ENSMUST00000135076	-	665	-	ENSMUSP00000117983	192 (aa)	-	B1AU42
ENSMUST00000143228	-	2769	-	ENSMUSP00000123279	591 (aa)	-	F2Z3Z6
ENSMUST00000063321	-	2008	-	ENSMUSP00000065128	581 (aa)	-	Q8BLF2
ENSMUST00000136021	-	467	-	ENSMUSP00000117315	92 (aa)	-	F6Y3R0
ENSMUST00000154701	-	489	-	ENSMUSP00000116009	80 (aa)	-	F6RX76
ENSMUST00000121591	-	2387	XM_011248864	ENSMUSP00000112477	585 (aa)	XP_011247166	Q8BLF2

Gene Model

Click here to download ENSMUSG00000020389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000020389	Cdkl3	98	34.574	ENSMUSG00000109060	Gm4513	69	33.649
ENSMUSG00000020389	Cdkl3	98	34.574	ENSMUSG00000094682	Gm6902	83	31.765
ENSMUSG00000020389	Cdkl3	98	34.574	ENSMUSG00000095363	Gm4567	83	31.765
ENSMUSG00000020389	Cdkl3	97	30.769	ENSMUSG00000034974	Dapk3	94	30.769
ENSMUSG00000020389	Cdkl3	98	34.574	ENSMUSG00000095190	Gm10668	83	31.765
ENSMUSG00000020389	Cdkl3	98	34.921	ENSMUSG00000095683	Gm10662	66	33.962
ENSMUSG00000020389	Cdkl3	88	33.721	ENSMUSG00000024969	Mark2	87	33.721
ENSMUSG00000020389	Cdkl3	98	34.574	ENSMUSG00000101436	Gm5157	69	33.649
ENSMUSG00000020389	Cdkl3	98	34.921	ENSMUSG00000095976	Gm5891	66	33.962
ENSMUSG00000020389	Cdkl3	98	34.043	ENSMUSG00000109516	Gm6882	66	33.175
ENSMUSG00000020389	Cdkl3	90	35.556	ENSMUSG00000046709	Mapk10	84	37.908
ENSMUSG00000020389	Cdkl3	98	34.574	ENSMUSG00000096283	Gm6176	83	31.765
ENSMUSG00000020389	Cdkl3	98	34.574	ENSMUSG00000109396	Gm4565	69	33.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020389	Cdkl3	100	94.271	ENSCLAG00000013562	CDKL3	100	94.271	Chinchilla_lanigera
ENSMUSG00000020389	Cdkl3	100	100.000	ENSCGRG00001024159	Cdkl3	100	95.327	Cricetulus_griseus_chok1gshd
ENSMUSG00000020389	Cdkl3	100	99.479	ENSCGRG00000008921	Cdkl3	100	99.479	Cricetulus_griseus_crigri
ENSMUSG00000020389	Cdkl3	100	95.833	ENSDORG00000002519	-	100	95.833	Dipodomys_ordii
ENSMUSG00000020389	Cdkl3	100	98.438	ENSFCAG00000024742	CDKL3	100	80.068	Felis_catus
ENSMUSG00000020389	Cdkl3	100	92.708	ENSHGLG00000018175	-	97	92.166	Heterocephalus_glaber_female
ENSMUSG00000020389	Cdkl3	100	92.708	ENSHGLG00100013066	-	100	92.708	Heterocephalus_glaber_male
ENSMUSG00000020389	Cdkl3	100	96.875	ENSJJAG00000000547	-	100	96.875	Jaculus_jaculus
ENSMUSG00000020389	Cdkl3	100	96.354	ENSLAFG00000011468	CDKL3	100	82.580	Loxodonta_africana
ENSMUSG00000020389	Cdkl3	100	100.000	ENSMAUG00000010031	-	100	100.000	Mesocricetus_auratus
ENSMUSG00000020389	Cdkl3	100	97.917	ENSMICG00000004579	CDKL3	96	82.136	Microcebus_murinus
ENSMUSG00000020389	Cdkl3	100	100.000	ENSMOCG00000012243	-	100	100.000	Microtus_ochrogaster
ENSMUSG00000020389	Cdkl3	100	100.000	MGP_CAROLIEiJ_G0016322	Cdkl3	100	100.000	Mus_caroli
ENSMUSG00000020389	Cdkl3	100	100.000	MGP_PahariEiJ_G0017457	Cdkl3	100	100.000	Mus_pahari
ENSMUSG00000020389	Cdkl3	100	100.000	MGP_SPRETEiJ_G0017166	Cdkl3	100	100.000	Mus_spretus
ENSMUSG00000020389	Cdkl3	100	99.479	ENSMPUG00000010119	CDKL3	99	82.521	Mustela_putorius_furo
ENSMUSG00000020389	Cdkl3	100	94.792	ENSMLUG00000012902	CDKL3	99	79.764	Myotis_lucifugus
ENSMUSG00000020389	Cdkl3	100	96.354	ENSOANG00000000233	CDKL3	100	71.486	Ornithorhynchus_anatinus
ENSMUSG00000020389	Cdkl3	100	97.917	ENSPPRG00000005837	CDKL3	99	84.547	Panthera_pardus
ENSMUSG00000020389	Cdkl3	100	97.917	ENSPTIG00000019406	CDKL3	99	82.923	Panthera_tigris_altaica
ENSMUSG00000020389	Cdkl3	100	100.000	ENSPEMG00000021980	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSMUSG00000020389	Cdkl3	100	98.958	ENSPVAG00000012429	CDKL3	99	78.921	Pteropus_vampyrus
ENSMUSG00000020389	Cdkl3	100	99.479	ENSRNOG00000059485	Cdkl3	100	95.126	Rattus_norvegicus
ENSMUSG00000020389	Cdkl3	100	99.479	ENSRNOG00000054806	LOC108348323	99	93.379	Rattus_norvegicus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0004672	protein kinase activity	-	IEA	Function
GO:0004674	protein serine/threonine kinase activity	-	IEA	Function
GO:0004693	cyclin-dependent protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006468	protein phosphorylation	21873635.	IBA	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0030517	negative regulation of axon extension	21873635.	IBA	Process
GO:0030517	negative regulation of axon extension	20347982.	IMP	Process
GO:0030517	negative regulation of axon extension	-	ISO	Process
GO:0050775	positive regulation of dendrite morphogenesis	21873635.	IBA	Process
GO:0050775	positive regulation of dendrite morphogenesis	20347982.	IMP	Process
GO:0050775	positive regulation of dendrite morphogenesis	-	ISO	Process
GO:0097484	dendrite extension	21873635.	IBA	Process
GO:0097484	dendrite extension	20347982.	IMP	Process
GO:0097484	dendrite extension	-	ISO	Process