EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000020409 (Gene tree)
Gene ID
193116
Gene Symbol
Slu7
Alias
D11Ertd730e|D3Bwg0878e
Full Name
SLU7 splicing factor homolog (S. cerevisiae)
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Plus strand
Length
14238 bases
Position
chr11:43433744-43447981
Accession
2385598
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000116609Slu7PF11708.89.6e-10911
ENSMUSP00000020681Slu7PF11708.81.4e-10811
ENSMUSP00000137281Slu7PF11708.81.4e-10811
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000149402-580--- (aa)--
ENSMUST00000020681-3625XM_011248823ENSMUSP00000020681585 (aa)XP_011247125Q8BHJ9
ENSMUST00000126128-574-ENSMUSP00000122142108 (aa)-B0QZT9
ENSMUST00000136541-430--- (aa)--
ENSMUST00000178622-3566-ENSMUSP00000137281585 (aa)-Q8BHJ9
ENSMUST00000151880-1662-ENSMUSP00000116609497 (aa)-Z4YM25
Gene Model
Click here to download ENSMUSG00000020409's gene model file
Pathways
Pathway IDPathway NameSource
mmu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020409's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000020409Slu79996.538ENSG00000164609SLU710095.734Homo_sapiens
ENSMUSG00000020409Slu79778.306ENSAPOG00000011660slu79977.069Acanthochromis_polyacanthus
ENSMUSG00000020409Slu710095.775ENSAMEG00000006613SLU710095.222Ailuropoda_melanoleuca
ENSMUSG00000020409Slu78982.313ENSACIG00000005652slu79773.944Amphilophus_citrinellus
ENSMUSG00000020409Slu79777.893ENSAPEG00000018095slu79976.672Amphiprion_percula
ENSMUSG00000020409Slu79876.910ENSATEG00000006357slu79977.083Anabas_testudineus
ENSMUSG00000020409Slu79787.967ENSAPLG00000008133SLU79886.458Anas_platyrhynchos
ENSMUSG00000020409Slu710083.503ENSACAG00000003144SLU710085.374Anolis_carolinensis
ENSMUSG00000020409Slu710095.222ENSANAG00000028320SLU710095.563Aotus_nancymaae
ENSMUSG00000020409Slu79480.000ENSACLG00000007273slu79875.726Astatotilapia_calliptera
ENSMUSG00000020409Slu79778.092ENSAMXG00000002404slu79778.092Astyanax_mexicanus
ENSMUSG00000020409Slu79996.538ENSBTAG00000008457SLU710095.734Bos_taurus
ENSMUSG00000020409Slu79248.060WBGene00010629K07C5.67346.493Caenorhabditis_elegans
ENSMUSG00000020409Slu710095.385ENSCJAG00000019132SLU710095.043Callithrix_jacchus
ENSMUSG00000020409Slu710095.563ENSCAFG00000017268SLU79395.904Canis_familiaris
ENSMUSG00000020409Slu710095.563ENSCAFG00020001456SLU79395.904Canis_lupus_dingo
ENSMUSG00000020409Slu79996.334ENSCHIG00000013793SLU710095.563Capra_hircus
ENSMUSG00000020409Slu710096.177ENSTSYG00000000157SLU710095.563Carlito_syrichta
ENSMUSG00000020409Slu710087.713ENSCAPG00000015711SLU710088.055Cavia_aperea
ENSMUSG00000020409Slu79994.094ENSCPOG00000004484SLU710093.345Cavia_porcellus
ENSMUSG00000020409Slu79995.927ENSCCAG00000035808SLU79995.222Cebus_capucinus
ENSMUSG00000020409Slu710095.976ENSCATG00000026140SLU710095.904Cercocebus_atys
ENSMUSG00000020409Slu79994.908ENSCLAG00000011915SLU710094.027Chinchilla_lanigera
ENSMUSG00000020409Slu79895.910ENSCSAG00000010383SLU79995.910Chlorocebus_sabaeus
ENSMUSG00000020409Slu710084.786ENSCHOG00000005055SLU710084.615Choloepus_hoffmanni
ENSMUSG00000020409Slu79986.558ENSCPBG00000008047SLU710085.495Chrysemys_picta_bellii
ENSMUSG00000020409Slu78967.568ENSCING00000008595zf(cchc)-127965.401Ciona_intestinalis
ENSMUSG00000020409Slu76657.362ENSCSAVG00000004927-10054.197Ciona_savignyi
ENSMUSG00000020409Slu710095.222ENSCANG00000003257SLU710095.563Colobus_angolensis_palliatus
ENSMUSG00000020409Slu78876.835ENSCGRG00001022223-9968.664Cricetulus_griseus_chok1gshd
ENSMUSG00000020409Slu710097.265ENSCGRG00001016416Slu710097.265Cricetulus_griseus_chok1gshd
ENSMUSG00000020409Slu710096.923ENSCGRG00000005164Slu710096.923Cricetulus_griseus_crigri
ENSMUSG00000020409Slu78777.315ENSCGRG00000008655-9968.966Cricetulus_griseus_crigri
ENSMUSG00000020409Slu79676.730ENSCSEG00000015522slu79875.789Cynoglossus_semilaevis
ENSMUSG00000020409Slu79777.352ENSCVAG00000019302slu79877.526Cyprinodon_variegatus
ENSMUSG00000020409Slu79778.459ENSDARG00000038870slu79078.459Danio_rerio
ENSMUSG00000020409Slu710093.675ENSDNOG00000048745SLU710093.504Dasypus_novemcinctus
ENSMUSG00000020409Slu79184.889ENSDORG00000025365-9978.716Dipodomys_ordii
ENSMUSG00000020409Slu79292.544ENSDORG00000006239-9983.077Dipodomys_ordii
ENSMUSG00000020409Slu79158.278FBgn0039626Slu79950.083Drosophila_melanogaster
ENSMUSG00000020409Slu79093.182ENSETEG00000014798-10092.803Echinops_telfairi
ENSMUSG00000020409Slu79073.274ENSETEG00000002993-10073.274Echinops_telfairi
ENSMUSG00000020409Slu79967.343ENSEBUG00000003656slu79064.407Eptatretus_burgeri
ENSMUSG00000020409Slu710095.775ENSEASG00005000613SLU710095.400Equus_asinus_asinus
ENSMUSG00000020409Slu710095.573ENSECAG00000013696SLU710095.392Equus_caballus
ENSMUSG00000020409Slu77296.386ENSEEUG00000006300-6196.386Erinaceus_europaeus
ENSMUSG00000020409Slu79775.620ENSELUG00000022607slu79973.585Esox_lucius
ENSMUSG00000020409Slu710096.246ENSFCAG00000011152SLU710096.246Felis_catus
ENSMUSG00000020409Slu77985.279ENSFALG00000014860-9785.279Ficedula_albicollis
ENSMUSG00000020409Slu710085.520ENSFALG00000013473-10086.054Ficedula_albicollis
ENSMUSG00000020409Slu710095.043ENSFDAG00000003906SLU710095.043Fukomys_damarensis
ENSMUSG00000020409Slu79777.719ENSFHEG00000012789slu79877.719Fundulus_heteroclitus
ENSMUSG00000020409Slu79574.576ENSGMOG00000016207slu79869.081Gadus_morhua
ENSMUSG00000020409Slu79888.090ENSGALG00000034414SLU78687.350Gallus_gallus
ENSMUSG00000020409Slu79877.755ENSGAFG00000007953slu79777.739Gambusia_affinis
ENSMUSG00000020409Slu79378.139ENSGACG00000018144slu79969.712Gasterosteus_aculeatus
ENSMUSG00000020409Slu79986.762ENSGAGG00000008256SLU710085.666Gopherus_agassizii
ENSMUSG00000020409Slu79996.334ENSGGOG00000005591SLU710095.563Gorilla_gorilla
ENSMUSG00000020409Slu78882.877ENSHBUG00000002296slu79283.105Haplochromis_burtoni
ENSMUSG00000020409Slu79483.156ENSHGLG00000008195-9281.535Heterocephalus_glaber_female
ENSMUSG00000020409Slu710095.214ENSHGLG00000009442-10095.214Heterocephalus_glaber_female
ENSMUSG00000020409Slu710095.214ENSHGLG00100008080-10095.214Heterocephalus_glaber_male
ENSMUSG00000020409Slu79578.316ENSHCOG00000003110slu79876.357Hippocampus_comes
ENSMUSG00000020409Slu79777.465ENSIPUG00000017949slu79877.465Ictalurus_punctatus
ENSMUSG00000020409Slu78190.928ENSSTOG00000015057SLU79891.350Ictidomys_tridecemlineatus
ENSMUSG00000020409Slu710095.385ENSJJAG00000011452Slu710095.385Jaculus_jaculus
ENSMUSG00000020409Slu79878.208ENSKMAG00000005625slu79976.280Kryptolebias_marmoratus
ENSMUSG00000020409Slu79777.226ENSLBEG00000004903slu79975.606Labrus_bergylta
ENSMUSG00000020409Slu79982.353ENSLACG00000010170SLU710081.261Latimeria_chalumnae
ENSMUSG00000020409Slu79781.449ENSLOCG00000009410slu79881.449Lepisosteus_oculatus
ENSMUSG00000020409Slu710093.504ENSLAFG00000003725SLU710093.162Loxodonta_africana
ENSMUSG00000020409Slu710095.222ENSMFAG00000002001SLU710095.563Macaca_fascicularis
ENSMUSG00000020409Slu710093.003ENSMMUG00000023075SLU710093.345Macaca_mulatta
ENSMUSG00000020409Slu79996.130ENSMNEG00000029132SLU710095.392Macaca_nemestrina
ENSMUSG00000020409Slu710095.976ENSMLEG00000037647SLU710095.904Mandrillus_leucophaeus
ENSMUSG00000020409Slu79577.474ENSMAMG00000008387slu79875.261Mastacembelus_armatus
ENSMUSG00000020409Slu79976.331ENSMZEG00005012180slu79876.937Maylandia_zebra
ENSMUSG00000020409Slu79887.885ENSMGAG00000002882SLU79987.009Meleagris_gallopavo
ENSMUSG00000020409Slu710097.270ENSMAUG00000016739Slu710097.270Mesocricetus_auratus
ENSMUSG00000020409Slu79895.122ENSMICG00000031781SLU710094.539Microcebus_murinus
ENSMUSG00000020409Slu710096.752ENSMOCG00000012963Slu710096.752Microtus_ochrogaster
ENSMUSG00000020409Slu76681.690ENSMMOG00000005988-7581.690Mola_mola
ENSMUSG00000020409Slu79578.947ENSMMOG00000004203slu79777.058Mola_mola
ENSMUSG00000020409Slu710089.761ENSMODG00000007968SLU79589.590Monodelphis_domestica
ENSMUSG00000020409Slu79577.215ENSMALG00000004247slu79875.352Monopterus_albus
ENSMUSG00000020409Slu710098.974MGP_CAROLIEiJ_G0016222Slu710098.974Mus_caroli
ENSMUSG00000020409Slu710098.291MGP_PahariEiJ_G0017358Slu710098.291Mus_pahari
ENSMUSG00000020409Slu710099.145MGP_SPRETEiJ_G0017063Slu710099.145Mus_spretus
ENSMUSG00000020409Slu710096.075ENSMPUG00000013264SLU79396.075Mustela_putorius_furo
ENSMUSG00000020409Slu79995.732ENSMLUG00000003091SLU710094.539Myotis_lucifugus
ENSMUSG00000020409Slu710096.581ENSNGAG00000015167Slu710096.581Nannospalax_galili
ENSMUSG00000020409Slu79996.334ENSNLEG00000004355SLU710095.392Nomascus_leucogenys
ENSMUSG00000020409Slu79393.939ENSMEUG00000010577SLU78993.939Notamacropus_eugenii
ENSMUSG00000020409Slu79894.033ENSOPRG00000004538SLU79987.394Ochotona_princeps
ENSMUSG00000020409Slu710085.812ENSODEG00000005892-9793.607Octodon_degus
ENSMUSG00000020409Slu79994.908ENSODEG00000010998-10094.027Octodon_degus
ENSMUSG00000020409Slu79778.010ENSONIG00000012957slu79878.010Oreochromis_niloticus
ENSMUSG00000020409Slu76585.640ENSOANG00000012329-9985.901Ornithorhynchus_anatinus
ENSMUSG00000020409Slu76692.378ENSOANG00000008090-9992.097Ornithorhynchus_anatinus
ENSMUSG00000020409Slu79995.951ENSOCUG00000011743SLU79993.675Oryctolagus_cuniculus
ENSMUSG00000020409Slu79975.848ENSORLG00000005505slu79974.916Oryzias_latipes
ENSMUSG00000020409Slu79578.737ENSORLG00020011665slu79777.289Oryzias_latipes_hni
ENSMUSG00000020409Slu79578.737ENSORLG00015002040slu79777.289Oryzias_latipes_hsok
ENSMUSG00000020409Slu79776.842ENSOMEG00000006235slu79776.842Oryzias_melastigma
ENSMUSG00000020409Slu710095.976ENSOGAG00000012301SLU710095.734Otolemur_garnettii
ENSMUSG00000020409Slu79996.130ENSOARG00000013468SLU710095.051Ovis_aries
ENSMUSG00000020409Slu79996.334ENSPPAG00000032717SLU710095.563Pan_paniscus
ENSMUSG00000020409Slu710095.904ENSPPRG00000013856SLU710095.904Panthera_pardus
ENSMUSG00000020409Slu710095.904ENSPTIG00000005434SLU710095.904Panthera_tigris_altaica
ENSMUSG00000020409Slu79996.334ENSPTRG00000017491SLU710095.392Pan_troglodytes
ENSMUSG00000020409Slu710095.976ENSPANG00000006850SLU710095.385Papio_anubis
ENSMUSG00000020409Slu79779.175ENSPKIG00000009367slu79976.298Paramormyrops_kingsleyae
ENSMUSG00000020409Slu710083.784ENSPSIG00000011216SLU710083.784Pelodiscus_sinensis
ENSMUSG00000020409Slu79775.265ENSPMGG00000015695slu79675.265Periophthalmus_magnuspinnatus
ENSMUSG00000020409Slu79977.108ENSPEMG00000000564-9977.625Peromyscus_maniculatus_bairdii
ENSMUSG00000020409Slu710097.384ENSPEMG00000016646-10097.265Peromyscus_maniculatus_bairdii
ENSMUSG00000020409Slu79989.446ENSPCIG00000018111SLU79989.273Phascolarctos_cinereus
ENSMUSG00000020409Slu79778.008ENSPFOG00000009050slu79976.298Poecilia_formosa
ENSMUSG00000020409Slu79777.847ENSPLAG00000005330slu79976.166Poecilia_latipinna
ENSMUSG00000020409Slu79579.114ENSPMEG00000024369slu79877.193Poecilia_mexicana
ENSMUSG00000020409Slu79777.032ENSPREG00000004355slu79877.032Poecilia_reticulata
ENSMUSG00000020409Slu79996.130ENSPPYG00000016008SLU710095.392Pongo_abelii
ENSMUSG00000020409Slu77797.436ENSPCAG00000003323SLU78597.436Procavia_capensis
ENSMUSG00000020409Slu710090.785ENSPCOG00000016138SLU710091.126Propithecus_coquereli
ENSMUSG00000020409Slu78293.519ENSPVAG00000015935SLU78293.519Pteropus_vampyrus
ENSMUSG00000020409Slu79478.782ENSPNYG00000000289slu79876.937Pundamilia_nyererei
ENSMUSG00000020409Slu79464.376ENSPNYG00000024087-9764.049Pundamilia_nyererei
ENSMUSG00000020409Slu79778.269ENSPNAG00000006885slu79877.680Pygocentrus_nattereri
ENSMUSG00000020409Slu710098.390ENSRNOG00000003822Slu710098.294Rattus_norvegicus
ENSMUSG00000020409Slu79895.092ENSRBIG00000021391SLU710093.015Rhinopithecus_bieti
ENSMUSG00000020409Slu710095.222ENSRROG00000008930SLU710095.563Rhinopithecus_roxellana
ENSMUSG00000020409Slu710095.392ENSSBOG00000003225SLU710095.734Saimiri_boliviensis_boliviensis
ENSMUSG00000020409Slu710089.761ENSSHAG00000009841-10089.590Sarcophilus_harrisii
ENSMUSG00000020409Slu79980.822ENSSHAG00000007807-10080.651Sarcophilus_harrisii
ENSMUSG00000020409Slu79779.649ENSSFOG00015015923slu79779.685Scleropages_formosus
ENSMUSG00000020409Slu79974.232ENSSMAG00000004281slu79974.232Scophthalmus_maximus
ENSMUSG00000020409Slu79578.947ENSSDUG00000005127slu79876.883Seriola_dumerili
ENSMUSG00000020409Slu79579.325ENSSLDG00000014353slu79877.233Seriola_lalandi_dorsalis
ENSMUSG00000020409Slu79586.441ENSSARG00000014128-10086.441Sorex_araneus
ENSMUSG00000020409Slu78487.050ENSSARG00000006390-10087.050Sorex_araneus
ENSMUSG00000020409Slu79786.042ENSSARG00000014139-10084.348Sorex_araneus
ENSMUSG00000020409Slu79885.391ENSSARG00000014137-10085.043Sorex_araneus
ENSMUSG00000020409Slu79879.756ENSSARG00000012209-10079.316Sorex_araneus
ENSMUSG00000020409Slu79785.208ENSSARG00000001869-10082.783Sorex_araneus
ENSMUSG00000020409Slu76180.563ENSSARG00000006540-10080.845Sorex_araneus
ENSMUSG00000020409Slu79785.625ENSSARG00000006902-10084.174Sorex_araneus
ENSMUSG00000020409Slu79785.417ENSSARG00000014506-10083.955Sorex_araneus
ENSMUSG00000020409Slu79986.558ENSSPUG00000000666SLU710085.593Sphenodon_punctatus
ENSMUSG00000020409Slu79579.661ENSSPAG00000014100slu79976.661Stegastes_partitus
ENSMUSG00000020409Slu79996.334ENSSSCG00000017033SLU710095.392Sus_scrofa
ENSMUSG00000020409Slu710085.690ENSTGUG00000001410SLU79986.224Taeniopygia_guttata
ENSMUSG00000020409Slu79774.087ENSTRUG00000001335slu79874.780Takifugu_rubripes
ENSMUSG00000020409Slu79678.306ENSTNIG00000009677slu710074.870Tetraodon_nigroviridis
ENSMUSG00000020409Slu710080.684ENSTBEG00000015604SLU79980.684Tupaia_belangeri
ENSMUSG00000020409Slu79095.076ENSTTRG00000011575SLU710095.076Tursiops_truncatus
ENSMUSG00000020409Slu710096.075ENSUMAG00000000110SLU79296.075Ursus_maritimus
ENSMUSG00000020409Slu79995.732ENSVPAG00000009595SLU710093.333Vicugna_pacos
ENSMUSG00000020409Slu710095.734ENSVVUG00000003989SLU79396.075Vulpes_vulpes
ENSMUSG00000020409Slu79780.579ENSXETG00000016536slu79882.090Xenopus_tropicalis
ENSMUSG00000020409Slu79776.585ENSXCOG00000004207slu79876.678Xiphophorus_couchianus
ENSMUSG00000020409Slu79579.114ENSXMAG00000009007slu79877.193Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000375RNA splicing, via transesterification reactions-ISOProcess
GO:0000380alternative mRNA splicing, via spliceosome-ISOProcess
GO:0000386second spliceosomal transesterification activity21873635.IBAFunction
GO:0000386second spliceosomal transesterification activity-ISOFunction
GO:0000389mRNA 3'-splice site recognition-ISOProcess
GO:0000398mRNA splicing, via spliceosome-IEAProcess
GO:0005634nucleus-ISOComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005681spliceosomal complex21873635.IBAComponent
GO:0005681spliceosomal complex-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0005829cytosol-ISOComponent
GO:0006397mRNA processing-IEAProcess
GO:0006886intracellular protein transport-ISOProcess
GO:0008270zinc ion binding-ISOFunction
GO:0008380RNA splicing-IEAProcess
GO:0016607nuclear speck-ISOComponent
GO:0030532small nuclear ribonucleoprotein complex-ISOComponent
GO:0030628pre-mRNA 3'-splice site binding-ISOFunction
GO:0034605cellular response to heat-ISOProcess
GO:0043231intracellular membrane-bounded organelle-ISOComponent
GO:0046872metal ion binding-IEAFunction
GO:0071013catalytic step 2 spliceosome-ISOComponent

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