EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000020440 (Gene tree)
Gene ID
11844
Gene Symbol
Arf5
Alias
-
Full Name
ADP-ribosylation factor 5
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
3043 bases
Position
chr6:28423560-28426602
Accession
99434
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000020717MMR_HSR1PF01926.237.9e-0511
ENSMUSP00000127281MMR_HSR1PF01926.237.9e-0511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000202028-919--- (aa)--
ENSMUST00000020717-1116-ENSMUSP00000020717180 (aa)-P84084
ENSMUST00000169841-768-ENSMUSP00000127281180 (aa)-P84084
Gene Model
Click here to download ENSMUSG00000020440's gene model file
Pathways
Pathway IDPathway NameSource
mmu04144EndocytosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020440's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000020440Arf510080.000ENSMUSG00000062421Arf29980.000
ENSMUSG00000020440Arf56132.110ENSMUSG00000020088Sar1a9535.556
ENSMUSG00000020440Arf59244.242ENSMUSG00000025035Arl39144.242
ENSMUSG00000020440Arf59434.225ENSMUSG00000038671Arfrp19038.393
ENSMUSG00000020440Arf510078.889ENSMUSG00000051853Arf39978.889
ENSMUSG00000020440Arf57035.938ENSMUSG00000025870Arl106235.938
ENSMUSG00000020440Arf59246.386ENSMUSG00000024944Arl29046.386
ENSMUSG00000020440Arf59045.455ENSMUSG00000098207Arl148645.455
ENSMUSG00000020440Arf59136.527ENSMUSG00000022722Arl69036.527
ENSMUSG00000020440Arf59631.609ENSMUSG00000030105Arl8b9431.609
ENSMUSG00000020440Arf510044.444ENSMUSG00000017418Arl5b9944.444
ENSMUSG00000020440Arf510040.323ENSMUSG00000034936Arl4d9140.323
ENSMUSG00000020440Arf59241.317ENSMUSG00000043157Arl119541.317
ENSMUSG00000020440Arf510045.556ENSMUSG00000036093Arl5a10045.556
ENSMUSG00000020440Arf59742.541ENSMUSG00000047446Arl4a9142.541
ENSMUSG00000020440Arf57230.147ENSMUSG00000027935Rab136730.147
ENSMUSG00000020440Arf59630.460ENSMUSG00000026426Arl8a9430.460
ENSMUSG00000020440Arf59642.197ENSMUSG00000038352Arl5c9642.197
ENSMUSG00000020440Arf59546.328ENSMUSG00000049866Arl4c9246.328
ENSMUSG00000020440Arf59259.394ENSMUSG00000060904Arl110063.043
ENSMUSG00000020440Arf59881.921ENSMUSG00000048076Arf19881.921
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000020440Arf5100100.000ENSG00000004059ARF5100100.000Homo_sapiens
ENSMUSG00000020440Arf59986.034ENSAPOG00000000667-9986.034Acanthochromis_polyacanthus
ENSMUSG00000020440Arf5100100.000ENSAMEG00000004635ARF5100100.000Ailuropoda_melanoleuca
ENSMUSG00000020440Arf510091.111ENSACIG00000005843arf510091.111Amphilophus_citrinellus
ENSMUSG00000020440Arf59987.709ENSACIG00000000467-9987.709Amphilophus_citrinellus
ENSMUSG00000020440Arf510069.444ENSACIG00000014610zgc:11028610069.444Amphilophus_citrinellus
ENSMUSG00000020440Arf59986.034ENSAOCG00000008113-9986.034Amphiprion_ocellaris
ENSMUSG00000020440Arf510090.000ENSAOCG00000023329arf510090.000Amphiprion_ocellaris
ENSMUSG00000020440Arf59986.034ENSAPEG00000003087-9986.034Amphiprion_percula
ENSMUSG00000020440Arf510090.000ENSAPEG00000024614arf510090.000Amphiprion_percula
ENSMUSG00000020440Arf510091.111ENSATEG00000003053ARF510091.111Anabas_testudineus
ENSMUSG00000020440Arf59986.592ENSATEG00000001302-9986.592Anabas_testudineus
ENSMUSG00000020440Arf5100100.000ENSANAG00000026446ARF5100100.000Aotus_nancymaae
ENSMUSG00000020440Arf510091.667ENSACLG00000005705arf510091.667Astatotilapia_calliptera
ENSMUSG00000020440Arf59987.151ENSACLG00000025604-9987.151Astatotilapia_calliptera
ENSMUSG00000020440Arf510093.889ENSAMXG00000004249-10093.889Astyanax_mexicanus
ENSMUSG00000020440Arf510091.667ENSAMXG00000031774ARF510091.667Astyanax_mexicanus
ENSMUSG00000020440Arf510093.333ENSAMXG00000038224-10093.333Astyanax_mexicanus
ENSMUSG00000020440Arf510091.667ENSAMXG00000031467arf4a10091.667Astyanax_mexicanus
ENSMUSG00000020440Arf5100100.000ENSBTAG00000009366ARF5100100.000Bos_taurus
ENSMUSG00000020440Arf59984.916WBGene00000183arf-39984.916Caenorhabditis_elegans
ENSMUSG00000020440Arf5100100.000ENSCJAG00000017604ARF5100100.000Callithrix_jacchus
ENSMUSG00000020440Arf510084.112ENSCAFG00020021629ARF510084.112Canis_lupus_dingo
ENSMUSG00000020440Arf5100100.000ENSCHIG00000018906ARF5100100.000Capra_hircus
ENSMUSG00000020440Arf510097.238ENSCPOG00000006239ARF510097.238Cavia_porcellus
ENSMUSG00000020440Arf5100100.000ENSCCAG00000027943-100100.000Cebus_capucinus
ENSMUSG00000020440Arf5100100.000ENSCATG00000010217ARF5100100.000Cercocebus_atys
ENSMUSG00000020440Arf5100100.000ENSCLAG00000007930ARF5100100.000Chinchilla_lanigera
ENSMUSG00000020440Arf5100100.000ENSCSAG00000010208ARF5100100.000Chlorocebus_sabaeus
ENSMUSG00000020440Arf59977.095ENSCING00000004846-9977.095Ciona_intestinalis
ENSMUSG00000020440Arf59974.033ENSCSAVG00000001959-9974.033Ciona_savignyi
ENSMUSG00000020440Arf58998.137ENSCANG00000037234ARF59898.137Colobus_angolensis_palliatus
ENSMUSG00000020440Arf5100100.000ENSCGRG00001024919Arf5100100.000Cricetulus_griseus_chok1gshd
ENSMUSG00000020440Arf510086.667ENSCSEG00000006004arf510086.667Cynoglossus_semilaevis
ENSMUSG00000020440Arf510091.667ENSCVAG00000009124ARF510091.667Cyprinodon_variegatus
ENSMUSG00000020440Arf59987.709ENSCVAG00000011381-9987.709Cyprinodon_variegatus
ENSMUSG00000020440Arf510091.667ENSCVAG00000007314-10091.667Cyprinodon_variegatus
ENSMUSG00000020440Arf510071.271ENSDARG00000074210ARF58971.271Danio_rerio
ENSMUSG00000020440Arf510093.333ENSDARG00000070472arf510093.333Danio_rerio
ENSMUSG00000020440Arf510091.667ENSDARG00000045989arf4a10091.667Danio_rerio
ENSMUSG00000020440Arf510093.889ENSDARG00000113899zgc:7765010093.889Danio_rerio
ENSMUSG00000020440Arf5100100.000ENSDORG00000000325Arf5100100.000Dipodomys_ordii
ENSMUSG00000020440Arf510083.889FBgn0013749Arf102F10083.889Drosophila_melanogaster
ENSMUSG00000020440Arf59796.571ENSETEG00000009275ARF510096.571Echinops_telfairi
ENSMUSG00000020440Arf59969.274ENSEBUG00000004484-9969.274Eptatretus_burgeri
ENSMUSG00000020440Arf510083.889ENSEBUG00000014420-10083.889Eptatretus_burgeri
ENSMUSG00000020440Arf59974.860ENSELUG00000014428arf49974.860Esox_lucius
ENSMUSG00000020440Arf5100100.000ENSFCAG00000005482ARF5100100.000Felis_catus
ENSMUSG00000020440Arf510091.111ENSFHEG00000023119arf510091.111Fundulus_heteroclitus
ENSMUSG00000020440Arf510088.889ENSGMOG00000008747arf510088.889Gadus_morhua
ENSMUSG00000020440Arf510088.889ENSGMOG00000019109-9988.889Gadus_morhua
ENSMUSG00000020440Arf59986.034ENSGAFG00000005163-9986.034Gambusia_affinis
ENSMUSG00000020440Arf510091.667ENSGAFG00000018703arf510091.667Gambusia_affinis
ENSMUSG00000020440Arf59984.916ENSGACG00000012500-9984.916Gasterosteus_aculeatus
ENSMUSG00000020440Arf510089.444ENSGACG00000000686arf510089.444Gasterosteus_aculeatus
ENSMUSG00000020440Arf510098.333ENSGAGG00000000231ARF510098.333Gopherus_agassizii
ENSMUSG00000020440Arf5100100.000ENSGGOG00000016749ARF5100100.000Gorilla_gorilla
ENSMUSG00000020440Arf59987.151ENSHBUG00000011041-9987.151Haplochromis_burtoni
ENSMUSG00000020440Arf510091.667ENSHBUG00000008546arf510091.667Haplochromis_burtoni
ENSMUSG00000020440Arf5100100.000ENSHGLG00000007494ARF5100100.000Heterocephalus_glaber_female
ENSMUSG00000020440Arf510098.333ENSHGLG00100006040ARF56098.333Heterocephalus_glaber_male
ENSMUSG00000020440Arf59983.799ENSHCOG00000015577-10083.799Hippocampus_comes
ENSMUSG00000020440Arf510093.889ENSIPUG00000004159Arf510093.889Ictalurus_punctatus
ENSMUSG00000020440Arf510092.222ENSIPUG00000007016arf410092.222Ictalurus_punctatus
ENSMUSG00000020440Arf510071.111ENSIPUG00000006913-7071.111Ictalurus_punctatus
ENSMUSG00000020440Arf510092.778ENSIPUG00000004215arf510092.778Ictalurus_punctatus
ENSMUSG00000020440Arf5100100.000ENSSTOG00000002104ARF5100100.000Ictidomys_tridecemlineatus
ENSMUSG00000020440Arf5100100.000ENSJJAG00000005105Arf5100100.000Jaculus_jaculus
ENSMUSG00000020440Arf59987.709ENSKMAG00000012816-9987.709Kryptolebias_marmoratus
ENSMUSG00000020440Arf510085.000ENSLBEG00000012002-9985.000Labrus_bergylta
ENSMUSG00000020440Arf510090.000ENSLBEG00000026532arf510090.000Labrus_bergylta
ENSMUSG00000020440Arf5100100.000ENSLAFG00000011469ARF5100100.000Loxodonta_africana
ENSMUSG00000020440Arf5100100.000ENSMFAG00000019772ARF5100100.000Macaca_fascicularis
ENSMUSG00000020440Arf5100100.000ENSMMUG00000046381ARF5100100.000Macaca_mulatta
ENSMUSG00000020440Arf5100100.000ENSMNEG00000040893ARF5100100.000Macaca_nemestrina
ENSMUSG00000020440Arf510090.556ENSMAMG00000021160arf510090.556Mastacembelus_armatus
ENSMUSG00000020440Arf59987.151ENSMAMG00000008223-9987.151Mastacembelus_armatus
ENSMUSG00000020440Arf510091.667ENSMZEG00005015033arf56791.667Maylandia_zebra
ENSMUSG00000020440Arf58788.535ENSMZEG00005019741-9388.535Maylandia_zebra
ENSMUSG00000020440Arf5100100.000ENSMAUG00000014825Arf5100100.000Mesocricetus_auratus
ENSMUSG00000020440Arf5100100.000ENSMICG00000000091ARF5100100.000Microcebus_murinus
ENSMUSG00000020440Arf5100100.000ENSMOCG00000022861Arf5100100.000Microtus_ochrogaster
ENSMUSG00000020440Arf510098.889ENSMODG00000015229ARF510098.889Monodelphis_domestica
ENSMUSG00000020440Arf59987.709ENSMALG00000006020-9987.709Monopterus_albus
ENSMUSG00000020440Arf59968.715ENSMALG00000022638zgc:11028610068.715Monopterus_albus
ENSMUSG00000020440Arf510091.111ENSMALG00000010117-10091.111Monopterus_albus
ENSMUSG00000020440Arf5100100.000MGP_CAROLIEiJ_G0028156Arf5100100.000Mus_caroli
ENSMUSG00000020440Arf5100100.000MGP_PahariEiJ_G0021914Arf5100100.000Mus_pahari
ENSMUSG00000020440Arf5100100.000MGP_SPRETEiJ_G0029156Arf5100100.000Mus_spretus
ENSMUSG00000020440Arf5100100.000ENSMPUG00000006675ARF5100100.000Mustela_putorius_furo
ENSMUSG00000020440Arf5100100.000ENSMLUG00000017122ARF5100100.000Myotis_lucifugus
ENSMUSG00000020440Arf5100100.000ENSNGAG00000011743Arf5100100.000Nannospalax_galili
ENSMUSG00000020440Arf510091.667ENSNBRG00000018854arf510091.667Neolamprologus_brichardi
ENSMUSG00000020440Arf5100100.000ENSODEG00000011800ARF5100100.000Octodon_degus
ENSMUSG00000020440Arf59987.151ENSONIG00000014890-9987.151Oreochromis_niloticus
ENSMUSG00000020440Arf510091.667ENSONIG00000007594arf510091.667Oreochromis_niloticus
ENSMUSG00000020440Arf5100100.000ENSOCUG00000024365ARF5100100.000Oryctolagus_cuniculus
ENSMUSG00000020440Arf59987.151ENSORLG00020001755-9987.151Oryzias_latipes_hni
ENSMUSG00000020440Arf510091.111ENSOMEG00000020821ARF510091.111Oryzias_melastigma
ENSMUSG00000020440Arf59987.151ENSOMEG00000000211-6487.151Oryzias_melastigma
ENSMUSG00000020440Arf5100100.000ENSOGAG00000013336ARF5100100.000Otolemur_garnettii
ENSMUSG00000020440Arf5100100.000ENSPPAG00000037755ARF5100100.000Pan_paniscus
ENSMUSG00000020440Arf5100100.000ENSPPRG00000004674ARF5100100.000Panthera_pardus
ENSMUSG00000020440Arf5100100.000ENSPTRG00000019651ARF5100100.000Pan_troglodytes
ENSMUSG00000020440Arf5100100.000ENSPANG00000032970ARF5100100.000Papio_anubis
ENSMUSG00000020440Arf510091.667ENSPKIG00000025349arf4a10091.667Paramormyrops_kingsleyae
ENSMUSG00000020440Arf510091.111ENSPKIG00000025381-10091.111Paramormyrops_kingsleyae
ENSMUSG00000020440Arf510090.556ENSPKIG00000013814-10090.556Paramormyrops_kingsleyae
ENSMUSG00000020440Arf510085.000ENSPMGG00000009985-10085.000Periophthalmus_magnuspinnatus
ENSMUSG00000020440Arf5100100.000ENSPEMG00000021476Arf5100100.000Peromyscus_maniculatus_bairdii
ENSMUSG00000020440Arf59978.771ENSPMAG00000009600arf4a10078.771Petromyzon_marinus
ENSMUSG00000020440Arf59985.556ENSPFOG00000017992-9985.556Poecilia_formosa
ENSMUSG00000020440Arf510091.667ENSPFOG00000015817arf510091.667Poecilia_formosa
ENSMUSG00000020440Arf510091.667ENSPLAG00000006742arf510091.667Poecilia_latipinna
ENSMUSG00000020440Arf59986.034ENSPLAG00000015630-9986.034Poecilia_latipinna
ENSMUSG00000020440Arf510091.667ENSPMEG00000009605arf510091.667Poecilia_mexicana
ENSMUSG00000020440Arf59986.034ENSPMEG00000004624-9986.034Poecilia_mexicana
ENSMUSG00000020440Arf5100100.000ENSPCOG00000027640ARF5100100.000Propithecus_coquereli
ENSMUSG00000020440Arf5100100.000ENSPVAG00000013940ARF5100100.000Pteropus_vampyrus
ENSMUSG00000020440Arf59987.151ENSPNYG00000004931-9987.151Pundamilia_nyererei
ENSMUSG00000020440Arf510091.667ENSPNYG00000001663arf510091.667Pundamilia_nyererei
ENSMUSG00000020440Arf510092.778ENSPNAG00000024427-10092.778Pygocentrus_nattereri
ENSMUSG00000020440Arf510071.111ENSPNAG00000004475-10071.111Pygocentrus_nattereri
ENSMUSG00000020440Arf510072.778ENSPNAG00000005054-10072.778Pygocentrus_nattereri
ENSMUSG00000020440Arf510092.222ENSPNAG00000004745arf4a10092.222Pygocentrus_nattereri
ENSMUSG00000020440Arf5100100.000ENSRNOG00000007806Arf5100100.000Rattus_norvegicus
ENSMUSG00000020440Arf5100100.000ENSRBIG00000039868ARF5100100.000Rhinopithecus_bieti
ENSMUSG00000020440Arf5100100.000ENSRROG00000041157ARF5100100.000Rhinopithecus_roxellana
ENSMUSG00000020440Arf5100100.000ENSSBOG00000021669ARF5100100.000Saimiri_boliviensis_boliviensis
ENSMUSG00000020440Arf510098.889ENSSHAG00000015053ARF510098.889Sarcophilus_harrisii
ENSMUSG00000020440Arf510090.556ENSSFOG00015020707ARF510090.556Scleropages_formosus
ENSMUSG00000020440Arf510080.000ENSSFOG00015007701-10080.000Scleropages_formosus
ENSMUSG00000020440Arf59983.799ENSSMAG00000004541-9983.799Scophthalmus_maximus
ENSMUSG00000020440Arf510090.556ENSSMAG00000011361arf510090.556Scophthalmus_maximus
ENSMUSG00000020440Arf510091.111ENSSDUG00000005105arf510091.111Seriola_dumerili
ENSMUSG00000020440Arf510091.111ENSSLDG00000017188arf510091.111Seriola_lalandi_dorsalis
ENSMUSG00000020440Arf59987.151ENSSPAG00000022680-9987.151Stegastes_partitus
ENSMUSG00000020440Arf510090.000ENSSPAG00000014434arf510090.000Stegastes_partitus
ENSMUSG00000020440Arf5100100.000ENSSSCG00000016593ARF5100100.000Sus_scrofa
ENSMUSG00000020440Arf59981.006ENSTRUG00000025462-10081.006Takifugu_rubripes
ENSMUSG00000020440Arf59989.385ENSTNIG00000003348arf510089.385Tetraodon_nigroviridis
ENSMUSG00000020440Arf59981.006ENSTNIG00000017954-10081.006Tetraodon_nigroviridis
ENSMUSG00000020440Arf59099.383ENSTTRG00000006043ARF510099.383Tursiops_truncatus
ENSMUSG00000020440Arf5100100.000ENSUAMG00000012982ARF5100100.000Ursus_americanus
ENSMUSG00000020440Arf5100100.000ENSVVUG00000007062ARF5100100.000Vulpes_vulpes
ENSMUSG00000020440Arf59986.034ENSXCOG00000020384-9986.034Xiphophorus_couchianus
ENSMUSG00000020440Arf510091.667ENSXMAG00000015306arf510091.667Xiphophorus_maculatus
ENSMUSG00000020440Arf59986.034ENSXMAG00000004558-9986.034Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0005515protein binding22111578.IPIFunction
GO:0005525GTP binding21873635.IBAFunction
GO:0005525GTP binding8947846.TASFunction
GO:0005737cytoplasm21873635.IBAComponent
GO:0005737cytoplasm8947846.IDAComponent
GO:0005794Golgi apparatus21873635.IBAComponent
GO:0005886plasma membrane21873635.IBAComponent
GO:0005886plasma membrane8947846.IDAComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0006890retrograde vesicle-mediated transport, Golgi to ER21873635.IBAProcess
GO:0006890retrograde vesicle-mediated transport, Golgi to ER-ISOProcess
GO:0006893Golgi to plasma membrane transport21873635.IBAProcess
GO:0015031protein transport8947846.TASProcess
GO:0016020membrane-IEAComponent
GO:0016192vesicle-mediated transport21873635.IBAProcess

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