EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020485 (Gene tree)
Gene ID: 20922
Gene Symbol: Supt4a
Alias: Supt4h|Supt4h1
Full Name: suppressor of Ty 4A
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 6072 bases
Position: chr11:87737552-87743623
Accession: 107416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000091487	Spt4	PF06093.13	2.6e-32	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000093955	-	706	XM_006532741	ENSMUSP00000091487	117 (aa)	-	P63271
ENSMUST00000152700	-	854	-	ENSMUSP00000118619	104 (aa)	-	D6RHM5
ENSMUST00000141169	-	799	-	ENSMUSP00000117762	87 (aa)	-	G3UVU8

Gene Model

Click here to download ENSMUSG00000020485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020485's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020485	Supt4a	100	100.000	ENSG00000213246	SUPT4H1	100	100.000	Homo_sapiens
ENSMUSG00000020485	Supt4a	80	87.234	ENSAPOG00000006828	supt4h1	100	87.234	Acanthochromis_polyacanthus
ENSMUSG00000020485	Supt4a	100	99.145	ENSAMEG00000011686	SUPT4H1	100	99.145	Ailuropoda_melanoleuca
ENSMUSG00000020485	Supt4a	80	87.234	ENSACIG00000012162	supt4h1	100	87.234	Amphilophus_citrinellus
ENSMUSG00000020485	Supt4a	100	89.744	ENSAOCG00000022349	supt4h1	100	89.744	Amphiprion_ocellaris
ENSMUSG00000020485	Supt4a	100	89.744	ENSAPEG00000013170	supt4h1	100	89.744	Amphiprion_percula
ENSMUSG00000020485	Supt4a	100	89.744	ENSATEG00000005317	supt4h1	100	89.744	Anabas_testudineus
ENSMUSG00000020485	Supt4a	100	83.051	ENSAPLG00000012497	SUPT4H1	100	83.051	Anas_platyrhynchos
ENSMUSG00000020485	Supt4a	100	99.145	ENSANAG00000026628	SUPT4H1	100	99.145	Aotus_nancymaae
ENSMUSG00000020485	Supt4a	100	90.598	ENSACLG00000005475	supt4h1	100	90.598	Astatotilapia_calliptera
ENSMUSG00000020485	Supt4a	100	86.325	ENSAMXG00000041272	supt4h1	100	86.325	Astyanax_mexicanus
ENSMUSG00000020485	Supt4a	90	58.095	WBGene00005014	spt-4	88	58.095	Caenorhabditis_elegans
ENSMUSG00000020485	Supt4a	100	100.000	ENSCJAG00000017369	SUPT4H1	100	100.000	Callithrix_jacchus
ENSMUSG00000020485	Supt4a	100	100.000	ENSCAFG00000017524	SUPT4H1	100	100.000	Canis_familiaris
ENSMUSG00000020485	Supt4a	100	100.000	ENSCAFG00020025803	SUPT4H1	78	100.000	Canis_lupus_dingo
ENSMUSG00000020485	Supt4a	100	100.000	ENSCHIG00000026783	SUPT4H1	100	100.000	Capra_hircus
ENSMUSG00000020485	Supt4a	100	100.000	ENSTSYG00000030004	SUPT4H1	100	100.000	Carlito_syrichta
ENSMUSG00000020485	Supt4a	100	100.000	ENSCPOG00000031227	SUPT4H1	100	100.000	Cavia_porcellus
ENSMUSG00000020485	Supt4a	100	100.000	ENSCCAG00000034799	SUPT4H1	100	100.000	Cebus_capucinus
ENSMUSG00000020485	Supt4a	100	72.650	ENSCATG00000024314	-	100	72.650	Cercocebus_atys
ENSMUSG00000020485	Supt4a	100	100.000	ENSCATG00000042435	SUPT4H1	100	100.000	Cercocebus_atys
ENSMUSG00000020485	Supt4a	100	100.000	ENSCLAG00000011223	SUPT4H1	100	100.000	Chinchilla_lanigera
ENSMUSG00000020485	Supt4a	100	100.000	ENSCSAG00000005761	SUPT4H1	100	100.000	Chlorocebus_sabaeus
ENSMUSG00000020485	Supt4a	100	83.761	ENSCHOG00000000246	SUPT4H1	100	83.761	Choloepus_hoffmanni
ENSMUSG00000020485	Supt4a	68	100.000	ENSCPBG00000015876	SUPT4H1	100	100.000	Chrysemys_picta_bellii
ENSMUSG00000020485	Supt4a	98	71.304	ENSCING00000019520	spt4	94	71.304	Ciona_intestinalis
ENSMUSG00000020485	Supt4a	98	72.174	ENSCSAVG00000009479	-	94	72.174	Ciona_savignyi
ENSMUSG00000020485	Supt4a	100	100.000	ENSCANG00000034430	SUPT4H1	100	100.000	Colobus_angolensis_palliatus
ENSMUSG00000020485	Supt4a	100	99.145	ENSCGRG00001018056	Supt4a	100	99.145	Cricetulus_griseus_chok1gshd
ENSMUSG00000020485	Supt4a	100	99.145	ENSCGRG00000014047	Supt4a	100	99.145	Cricetulus_griseus_crigri
ENSMUSG00000020485	Supt4a	100	88.889	ENSCSEG00000010897	supt4h1	100	88.889	Cynoglossus_semilaevis
ENSMUSG00000020485	Supt4a	100	89.744	ENSCVAG00000014190	supt4h1	100	89.744	Cyprinodon_variegatus
ENSMUSG00000020485	Supt4a	100	88.034	ENSDARG00000113969	supt4h1	100	88.034	Danio_rerio
ENSMUSG00000020485	Supt4a	100	100.000	ENSDNOG00000032349	SUPT4H1	100	100.000	Dasypus_novemcinctus
ENSMUSG00000020485	Supt4a	94	86.087	ENSDORG00000030049	-	100	86.957	Dipodomys_ordii
ENSMUSG00000020485	Supt4a	100	100.000	ENSDORG00000002826	-	100	100.000	Dipodomys_ordii
ENSMUSG00000020485	Supt4a	96	62.500	FBgn0028683	spt4	97	62.500	Drosophila_melanogaster
ENSMUSG00000020485	Supt4a	65	80.263	ENSEBUG00000006884	supt4h1	100	80.263	Eptatretus_burgeri
ENSMUSG00000020485	Supt4a	100	100.000	ENSEASG00005002787	SUPT4H1	80	100.000	Equus_asinus_asinus
ENSMUSG00000020485	Supt4a	100	100.000	ENSECAG00000016585	SUPT4H1	100	100.000	Equus_caballus
ENSMUSG00000020485	Supt4a	100	88.889	ENSELUG00000019831	supt4h1	100	88.889	Esox_lucius
ENSMUSG00000020485	Supt4a	100	100.000	ENSFCAG00000018732	SUPT4H1	100	100.000	Felis_catus
ENSMUSG00000020485	Supt4a	80	94.681	ENSFALG00000013757	SUPT4H1	100	94.681	Ficedula_albicollis
ENSMUSG00000020485	Supt4a	100	99.145	ENSFDAG00000016718	SUPT4H1	100	99.145	Fukomys_damarensis
ENSMUSG00000020485	Supt4a	100	90.598	ENSFHEG00000009114	supt4h1	100	90.598	Fundulus_heteroclitus
ENSMUSG00000020485	Supt4a	100	86.325	ENSGMOG00000014619	supt4h1	100	86.325	Gadus_morhua
ENSMUSG00000020485	Supt4a	100	97.436	ENSGALG00000000944	SUPT4H1	100	97.436	Gallus_gallus
ENSMUSG00000020485	Supt4a	100	88.889	ENSGAFG00000014374	supt4h1	100	88.889	Gambusia_affinis
ENSMUSG00000020485	Supt4a	100	88.034	ENSGACG00000020237	supt4h1	100	88.034	Gasterosteus_aculeatus
ENSMUSG00000020485	Supt4a	70	98.361	ENSGAGG00000008561	SUPT4H1	52	98.361	Gopherus_agassizii
ENSMUSG00000020485	Supt4a	100	100.000	ENSGGOG00000007232	SUPT4H1	100	100.000	Gorilla_gorilla
ENSMUSG00000020485	Supt4a	90	87.619	ENSHBUG00000000848	-	89	87.619	Haplochromis_burtoni
ENSMUSG00000020485	Supt4a	80	88.298	ENSHBUG00000022528	supt4h1	100	88.298	Haplochromis_burtoni
ENSMUSG00000020485	Supt4a	100	99.145	ENSHGLG00000005007	SUPT4H1	100	99.145	Heterocephalus_glaber_female
ENSMUSG00000020485	Supt4a	100	99.145	ENSHGLG00100018961	SUPT4H1	100	99.145	Heterocephalus_glaber_male
ENSMUSG00000020485	Supt4a	100	87.179	ENSHCOG00000010739	supt4h1	100	87.179	Hippocampus_comes
ENSMUSG00000020485	Supt4a	100	87.179	ENSIPUG00000012062	supt4h1	100	87.179	Ictalurus_punctatus
ENSMUSG00000020485	Supt4a	100	78.512	ENSSTOG00000032338	SUPT4H1	100	78.512	Ictidomys_tridecemlineatus
ENSMUSG00000020485	Supt4a	100	100.000	ENSJJAG00000010938	Supt4a	100	100.000	Jaculus_jaculus
ENSMUSG00000020485	Supt4a	100	88.889	ENSKMAG00000013119	supt4h1	100	88.889	Kryptolebias_marmoratus
ENSMUSG00000020485	Supt4a	100	88.889	ENSLBEG00000018308	supt4h1	100	88.889	Labrus_bergylta
ENSMUSG00000020485	Supt4a	100	93.162	ENSLACG00000016364	SUPT4H1	100	93.162	Latimeria_chalumnae
ENSMUSG00000020485	Supt4a	100	93.162	ENSLOCG00000002970	supt4h1	100	93.162	Lepisosteus_oculatus
ENSMUSG00000020485	Supt4a	100	100.000	ENSLAFG00000020718	SUPT4H1	100	100.000	Loxodonta_africana
ENSMUSG00000020485	Supt4a	100	72.650	ENSMFAG00000045087	-	100	72.650	Macaca_fascicularis
ENSMUSG00000020485	Supt4a	100	100.000	ENSMFAG00000003856	SUPT4H1	100	100.000	Macaca_fascicularis
ENSMUSG00000020485	Supt4a	100	72.650	ENSMMUG00000049176	-	100	72.650	Macaca_mulatta
ENSMUSG00000020485	Supt4a	100	100.000	ENSMMUG00000040655	SUPT4H1	100	100.000	Macaca_mulatta
ENSMUSG00000020485	Supt4a	100	71.795	ENSMNEG00000034957	-	100	71.795	Macaca_nemestrina
ENSMUSG00000020485	Supt4a	100	72.650	ENSMNEG00000032891	-	100	72.650	Macaca_nemestrina
ENSMUSG00000020485	Supt4a	100	100.000	ENSMNEG00000037471	SUPT4H1	100	100.000	Macaca_nemestrina
ENSMUSG00000020485	Supt4a	100	68.376	ENSMLEG00000031477	-	100	68.376	Mandrillus_leucophaeus
ENSMUSG00000020485	Supt4a	100	100.000	ENSMLEG00000013750	SUPT4H1	100	100.000	Mandrillus_leucophaeus
ENSMUSG00000020485	Supt4a	100	76.923	ENSMLEG00000040145	-	100	76.923	Mandrillus_leucophaeus
ENSMUSG00000020485	Supt4a	100	89.744	ENSMAMG00000006148	supt4h1	100	89.744	Mastacembelus_armatus
ENSMUSG00000020485	Supt4a	100	90.598	ENSMZEG00005023783	supt4h1	100	90.598	Maylandia_zebra
ENSMUSG00000020485	Supt4a	100	99.145	ENSMAUG00000013090	Supt4a	100	99.145	Mesocricetus_auratus
ENSMUSG00000020485	Supt4a	100	100.000	ENSMICG00000043219	SUPT4H1	100	100.000	Microcebus_murinus
ENSMUSG00000020485	Supt4a	100	99.145	ENSMOCG00000005545	Supt4a	100	99.145	Microtus_ochrogaster
ENSMUSG00000020485	Supt4a	80	87.234	ENSMMOG00000005411	supt4h1	100	87.234	Mola_mola
ENSMUSG00000020485	Supt4a	100	82.906	ENSMODG00000024427	-	100	82.906	Monodelphis_domestica
ENSMUSG00000020485	Supt4a	100	96.581	ENSMODG00000024938	-	100	96.581	Monodelphis_domestica
ENSMUSG00000020485	Supt4a	100	90.598	ENSMALG00000013156	supt4h1	100	90.598	Monopterus_albus
ENSMUSG00000020485	Supt4a	100	100.000	ENSMPUG00000015326	SUPT4H1	98	100.000	Mustela_putorius_furo
ENSMUSG00000020485	Supt4a	100	93.162	ENSMLUG00000027172	-	100	93.162	Myotis_lucifugus
ENSMUSG00000020485	Supt4a	100	93.162	ENSMLUG00000028057	-	100	93.162	Myotis_lucifugus
ENSMUSG00000020485	Supt4a	100	94.872	ENSMLUG00000024867	-	100	94.872	Myotis_lucifugus
ENSMUSG00000020485	Supt4a	100	100.000	ENSMLUG00000025583	-	100	100.000	Myotis_lucifugus
ENSMUSG00000020485	Supt4a	100	100.000	ENSNGAG00000015537	-	100	100.000	Nannospalax_galili
ENSMUSG00000020485	Supt4a	64	78.667	ENSNGAG00000014401	-	99	78.667	Nannospalax_galili
ENSMUSG00000020485	Supt4a	100	90.598	ENSNBRG00000016146	supt4h1	100	90.598	Neolamprologus_brichardi
ENSMUSG00000020485	Supt4a	97	70.175	ENSNLEG00000028366	-	80	70.175	Nomascus_leucogenys
ENSMUSG00000020485	Supt4a	100	100.000	ENSNLEG00000008159	-	100	100.000	Nomascus_leucogenys
ENSMUSG00000020485	Supt4a	92	87.037	ENSNLEG00000033851	-	98	87.037	Nomascus_leucogenys
ENSMUSG00000020485	Supt4a	100	97.436	ENSMEUG00000010164	SUPT4H1	100	97.436	Notamacropus_eugenii
ENSMUSG00000020485	Supt4a	100	69.231	ENSOPRG00000018779	-	100	69.231	Ochotona_princeps
ENSMUSG00000020485	Supt4a	100	100.000	ENSODEG00000011183	SUPT4H1	100	100.000	Octodon_degus
ENSMUSG00000020485	Supt4a	100	100.000	ENSOCUG00000025823	SUPT4H1	100	100.000	Oryctolagus_cuniculus
ENSMUSG00000020485	Supt4a	100	90.598	ENSORLG00000011097	supt4h1	100	90.598	Oryzias_latipes
ENSMUSG00000020485	Supt4a	100	90.598	ENSORLG00020018918	supt4h1	100	90.598	Oryzias_latipes_hni
ENSMUSG00000020485	Supt4a	100	90.598	ENSORLG00015001908	supt4h1	100	90.598	Oryzias_latipes_hsok
ENSMUSG00000020485	Supt4a	100	90.598	ENSOMEG00000009103	supt4h1	100	90.598	Oryzias_melastigma
ENSMUSG00000020485	Supt4a	100	100.000	ENSOGAG00000031972	SUPT4H1	100	100.000	Otolemur_garnettii
ENSMUSG00000020485	Supt4a	100	100.000	ENSOARG00000010021	SUPT4H1	100	100.000	Ovis_aries
ENSMUSG00000020485	Supt4a	100	100.000	ENSPPRG00000010997	SUPT4H1	100	100.000	Panthera_pardus
ENSMUSG00000020485	Supt4a	100	100.000	ENSPTIG00000006503	SUPT4H1	100	100.000	Panthera_tigris_altaica
ENSMUSG00000020485	Supt4a	100	100.000	ENSPTRG00000009451	SUPT4H1	100	100.000	Pan_troglodytes
ENSMUSG00000020485	Supt4a	100	71.795	ENSPANG00000031534	-	100	71.795	Papio_anubis
ENSMUSG00000020485	Supt4a	100	100.000	ENSPANG00000022280	SUPT4H1	100	100.000	Papio_anubis
ENSMUSG00000020485	Supt4a	100	79.487	ENSPKIG00000017008	supt4h1	100	79.487	Paramormyrops_kingsleyae
ENSMUSG00000020485	Supt4a	84	95.918	ENSPSIG00000008272	SUPT4H1	100	95.918	Pelodiscus_sinensis
ENSMUSG00000020485	Supt4a	83	85.567	ENSPMGG00000013558	supt4h1	100	85.567	Periophthalmus_magnuspinnatus
ENSMUSG00000020485	Supt4a	100	99.145	ENSPEMG00000001651	Supt4a	100	99.145	Peromyscus_maniculatus_bairdii
ENSMUSG00000020485	Supt4a	78	79.121	ENSPCIG00000007509	-	80	79.121	Phascolarctos_cinereus
ENSMUSG00000020485	Supt4a	100	97.436	ENSPCIG00000015610	-	100	97.436	Phascolarctos_cinereus
ENSMUSG00000020485	Supt4a	100	88.889	ENSPFOG00000018406	supt4h1	100	88.889	Poecilia_formosa
ENSMUSG00000020485	Supt4a	100	88.889	ENSPLAG00000012498	supt4h1	100	88.889	Poecilia_latipinna
ENSMUSG00000020485	Supt4a	100	88.889	ENSPMEG00000011887	supt4h1	100	88.889	Poecilia_mexicana
ENSMUSG00000020485	Supt4a	82	89.583	ENSPREG00000008031	supt4h1	75	85.263	Poecilia_reticulata
ENSMUSG00000020485	Supt4a	100	100.000	ENSPPYG00000008233	SUPT4H1	100	100.000	Pongo_abelii
ENSMUSG00000020485	Supt4a	50	100.000	ENSPCAG00000011213	-	100	100.000	Procavia_capensis
ENSMUSG00000020485	Supt4a	100	100.000	ENSPCOG00000016589	SUPT4H1	100	100.000	Propithecus_coquereli
ENSMUSG00000020485	Supt4a	100	100.000	ENSPVAG00000002320	SUPT4H1	100	100.000	Pteropus_vampyrus
ENSMUSG00000020485	Supt4a	100	90.598	ENSPNYG00000016837	supt4h1	100	90.598	Pundamilia_nyererei
ENSMUSG00000020485	Supt4a	80	87.234	ENSPNAG00000009422	supt4h1	100	87.234	Pygocentrus_nattereri
ENSMUSG00000020485	Supt4a	100	100.000	ENSRNOG00000007845	Supt4h1	100	100.000	Rattus_norvegicus
ENSMUSG00000020485	Supt4a	100	100.000	ENSRBIG00000043489	SUPT4H1	100	100.000	Rhinopithecus_bieti
ENSMUSG00000020485	Supt4a	100	100.000	ENSRROG00000045659	SUPT4H1	100	100.000	Rhinopithecus_roxellana
ENSMUSG00000020485	Supt4a	85	43.434	YGR063C	-	91	43.434	Saccharomyces_cerevisiae
ENSMUSG00000020485	Supt4a	100	100.000	ENSSBOG00000031578	SUPT4H1	100	100.000	Saimiri_boliviensis_boliviensis
ENSMUSG00000020485	Supt4a	65	86.842	ENSSFOG00015001230	supt4h1	100	86.842	Scleropages_formosus
ENSMUSG00000020485	Supt4a	100	90.598	ENSSMAG00000000422	supt4h1	100	90.598	Scophthalmus_maximus
ENSMUSG00000020485	Supt4a	100	90.598	ENSSDUG00000017639	supt4h1	100	90.598	Seriola_dumerili
ENSMUSG00000020485	Supt4a	100	90.598	ENSSLDG00000019831	supt4h1	100	90.598	Seriola_lalandi_dorsalis
ENSMUSG00000020485	Supt4a	100	97.436	ENSSPUG00000001513	SUPT4H1	100	97.436	Sphenodon_punctatus
ENSMUSG00000020485	Supt4a	100	90.598	ENSSPAG00000017849	supt4h1	100	90.598	Stegastes_partitus
ENSMUSG00000020485	Supt4a	100	100.000	ENSSSCG00000034752	SUPT4H1	100	100.000	Sus_scrofa
ENSMUSG00000020485	Supt4a	50	94.828	ENSTGUG00000003297	SUPT4H1	100	94.828	Taeniopygia_guttata
ENSMUSG00000020485	Supt4a	100	88.889	ENSTRUG00000021118	supt4h1	100	88.889	Takifugu_rubripes
ENSMUSG00000020485	Supt4a	100	88.889	ENSTNIG00000008553	supt4h1	100	88.889	Tetraodon_nigroviridis
ENSMUSG00000020485	Supt4a	100	100.000	ENSUAMG00000005160	SUPT4H1	100	100.000	Ursus_americanus
ENSMUSG00000020485	Supt4a	100	100.000	ENSUMAG00000022805	SUPT4H1	100	100.000	Ursus_maritimus
ENSMUSG00000020485	Supt4a	80	100.000	ENSVPAG00000009628	SUPT4H1	100	100.000	Vicugna_pacos
ENSMUSG00000020485	Supt4a	100	100.000	ENSVVUG00000012505	SUPT4H1	100	100.000	Vulpes_vulpes
ENSMUSG00000020485	Supt4a	100	77.966	ENSXETG00000025331	supt4h1	100	77.966	Xenopus_tropicalis
ENSMUSG00000020485	Supt4a	80	86.170	ENSXCOG00000005652	supt4h1	100	86.170	Xiphophorus_couchianus
ENSMUSG00000020485	Supt4a	100	88.889	ENSXMAG00000005633	supt4h1	100	88.889	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000993	RNA polymerase II complex binding	21873635.	IBA	Function
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0006325	chromatin organization	21873635.	IBA	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0006368	transcription elongation from RNA polymerase II promoter	-	ISO	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0032044	DSIF complex	21873635.	IBA	Component
GO:0032044	DSIF complex	-	ISO	Component
GO:0032785	negative regulation of DNA-templated transcription, elongation	-	ISO	Process
GO:0032786	positive regulation of DNA-templated transcription, elongation	-	ISO	Process
GO:0034244	negative regulation of transcription elongation from RNA polymerase II promoter	21670248.	IMP	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0046982	protein heterodimerization activity	-	ISO	Function