EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020549 (Gene tree)
Gene ID: 68626
Gene Symbol: Elac2
Alias: 1110017O07Rik|D11Wsu80e|tRNase Z(L)
Full Name: elaC ribonuclease Z 2
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 23032 bases
Position: chr11:64979038-65002069
Accession: 1890496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000104337	Lactamase_B_4	PF13691.6	2.9e-15	1	1
ENSMUSP00000098610	Lactamase_B_4	PF13691.6	2.9e-15	1	1
ENSMUSP00000071788	Lactamase_B_4	PF13691.6	2.9e-15	1	1
ENSMUSP00000104337	Lactamase_B	PF00753.27	6.7e-05	1	1
ENSMUSP00000098610	Lactamase_B	PF00753.27	6.8e-05	1	1
ENSMUSP00000071788	Lactamase_B	PF00753.27	6.9e-05	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000142574	-	372	-	-	- (aa)	-	-
ENSMUST00000140369	-	3329	-	-	- (aa)	-	-
ENSMUST00000071891	-	2771	XM_006534065	ENSMUSP00000071788	831 (aa)	XP_006534128	Q80Y81
ENSMUST00000108697	-	2612	-	ENSMUSP00000104337	823 (aa)	-	B1ATP7
ENSMUST00000128693	-	475	-	-	- (aa)	-	-
ENSMUST00000101049	-	2884	XM_017314731	ENSMUSP00000098610	824 (aa)	XP_017170220	Q80Y81
ENSMUST00000132308	-	697	-	ENSMUSP00000117422	207 (aa)	-	B1ATP9

Gene Model

Click here to download ENSMUSG00000020549's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020549's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020549	Elac2	100	81.993	ENSG00000006744	ELAC2	99	88.430	Homo_sapiens
ENSMUSG00000020549	Elac2	88	60.982	ENSAPOG00000002563	elac2	92	59.761	Acanthochromis_polyacanthus
ENSMUSG00000020549	Elac2	100	77.911	ENSAMEG00000010418	ELAC2	100	77.671	Ailuropoda_melanoleuca
ENSMUSG00000020549	Elac2	91	61.620	ENSAOCG00000003756	elac2	93	60.176	Amphiprion_ocellaris
ENSMUSG00000020549	Elac2	83	71.250	ENSAPEG00000019425	elac2	90	71.250	Amphiprion_percula
ENSMUSG00000020549	Elac2	92	60.591	ENSATEG00000020251	elac2	92	60.678	Anabas_testudineus
ENSMUSG00000020549	Elac2	98	66.909	ENSACAG00000017398	ELAC2	98	67.030	Anolis_carolinensis
ENSMUSG00000020549	Elac2	100	83.333	ENSANAG00000036642	ELAC2	100	83.333	Aotus_nancymaae
ENSMUSG00000020549	Elac2	90	60.748	ENSACLG00000020349	elac2	93	60.626	Astatotilapia_calliptera
ENSMUSG00000020549	Elac2	100	79.106	ENSBTAG00000021939	ELAC2	100	79.106	Bos_taurus
ENSMUSG00000020549	Elac2	100	83.313	ENSCJAG00000004542	ELAC2	100	83.313	Callithrix_jacchus
ENSMUSG00000020549	Elac2	98	82.432	ENSCAFG00000017886	ELAC2	100	81.906	Canis_familiaris
ENSMUSG00000020549	Elac2	98	80.982	ENSCAFG00020000574	ELAC2	100	80.482	Canis_lupus_dingo
ENSMUSG00000020549	Elac2	100	79.952	ENSCHIG00000025992	ELAC2	100	79.952	Capra_hircus
ENSMUSG00000020549	Elac2	100	85.852	ENSTSYG00000005202	ELAC2	100	85.852	Carlito_syrichta
ENSMUSG00000020549	Elac2	99	83.233	ENSCPOG00000009098	ELAC2	99	83.233	Cavia_porcellus
ENSMUSG00000020549	Elac2	100	82.974	ENSCCAG00000036307	ELAC2	100	82.974	Cebus_capucinus
ENSMUSG00000020549	Elac2	100	82.833	ENSCATG00000030564	ELAC2	100	82.833	Cercocebus_atys
ENSMUSG00000020549	Elac2	99	83.855	ENSCLAG00000007156	ELAC2	100	83.794	Chinchilla_lanigera
ENSMUSG00000020549	Elac2	100	81.753	ENSCSAG00000009057	ELAC2	100	81.753	Chlorocebus_sabaeus
ENSMUSG00000020549	Elac2	96	68.850	ENSCPBG00000027769	ELAC2	98	68.916	Chrysemys_picta_bellii
ENSMUSG00000020549	Elac2	100	82.593	ENSCANG00000040743	ELAC2	100	82.593	Colobus_angolensis_palliatus
ENSMUSG00000020549	Elac2	99	88.875	ENSCGRG00001023086	Elac2	98	88.623	Cricetulus_griseus_chok1gshd
ENSMUSG00000020549	Elac2	91	83.489	ENSCGRG00000011564	Elac2	99	83.489	Cricetulus_griseus_crigri
ENSMUSG00000020549	Elac2	92	57.687	ENSCSEG00000020630	elac2	93	57.687	Cynoglossus_semilaevis
ENSMUSG00000020549	Elac2	91	61.111	ENSCVAG00000003649	elac2	97	58.582	Cyprinodon_variegatus
ENSMUSG00000020549	Elac2	93	58.862	ENSDARG00000034060	elac2	99	57.057	Danio_rerio
ENSMUSG00000020549	Elac2	100	74.002	ENSDNOG00000004242	ELAC2	99	74.241	Dasypus_novemcinctus
ENSMUSG00000020549	Elac2	90	85.211	ENSDORG00000005592	Elac2	98	85.211	Dipodomys_ordii
ENSMUSG00000020549	Elac2	96	33.611	FBgn0028426	JhI-1	99	33.613	Drosophila_melanogaster
ENSMUSG00000020549	Elac2	95	47.321	ENSEBUG00000011361	elac2	92	47.321	Eptatretus_burgeri
ENSMUSG00000020549	Elac2	100	84.903	ENSEASG00005016922	ELAC2	100	84.903	Equus_asinus_asinus
ENSMUSG00000020549	Elac2	91	61.046	ENSELUG00000018265	elac2	95	60.526	Esox_lucius
ENSMUSG00000020549	Elac2	100	80.314	ENSFCAG00000008407	ELAC2	100	80.314	Felis_catus
ENSMUSG00000020549	Elac2	99	83.010	ENSFDAG00000010293	ELAC2	100	82.950	Fukomys_damarensis
ENSMUSG00000020549	Elac2	90	60.453	ENSFHEG00000015744	elac2	90	60.363	Fundulus_heteroclitus
ENSMUSG00000020549	Elac2	82	68.000	ENSGMOG00000008574	elac2	96	68.000	Gadus_morhua
ENSMUSG00000020549	Elac2	99	60.335	ENSGALG00000001036	ELAC2	99	60.335	Gallus_gallus
ENSMUSG00000020549	Elac2	91	60.106	ENSGAFG00000005456	elac2	75	75.652	Gambusia_affinis
ENSMUSG00000020549	Elac2	90	60.748	ENSGACG00000014454	elac2	99	59.023	Gasterosteus_aculeatus
ENSMUSG00000020549	Elac2	96	68.461	ENSGAGG00000017133	ELAC2	98	68.077	Gopherus_agassizii
ENSMUSG00000020549	Elac2	100	82.593	ENSGGOG00000015850	ELAC2	100	82.593	Gorilla_gorilla
ENSMUSG00000020549	Elac2	90	60.614	ENSHBUG00000017777	elac2	89	60.495	Haplochromis_burtoni
ENSMUSG00000020549	Elac2	99	83.032	ENSHGLG00000005718	ELAC2	100	82.974	Heterocephalus_glaber_female
ENSMUSG00000020549	Elac2	99	82.792	ENSHGLG00100003619	ELAC2	100	82.734	Heterocephalus_glaber_male
ENSMUSG00000020549	Elac2	90	60.509	ENSHCOG00000006972	elac2	95	61.068	Hippocampus_comes
ENSMUSG00000020549	Elac2	91	61.886	ENSIPUG00000022303	elac2	95	59.729	Ictalurus_punctatus
ENSMUSG00000020549	Elac2	99	85.697	ENSSTOG00000006680	ELAC2	100	85.697	Ictidomys_tridecemlineatus
ENSMUSG00000020549	Elac2	52	58.102	ENSKMAG00000019598	elac2	99	55.215	Kryptolebias_marmoratus
ENSMUSG00000020549	Elac2	91	61.111	ENSLBEG00000027524	elac2	88	61.440	Labrus_bergylta
ENSMUSG00000020549	Elac2	96	63.366	ENSLOCG00000012146	elac2	97	63.366	Lepisosteus_oculatus
ENSMUSG00000020549	Elac2	99	81.288	ENSLAFG00000009404	ELAC2	100	81.288	Loxodonta_africana
ENSMUSG00000020549	Elac2	100	83.073	ENSMFAG00000041840	ELAC2	100	83.073	Macaca_fascicularis
ENSMUSG00000020549	Elac2	100	83.073	ENSMMUG00000014450	ELAC2	100	83.073	Macaca_mulatta
ENSMUSG00000020549	Elac2	100	82.833	ENSMNEG00000044872	ELAC2	100	82.833	Macaca_nemestrina
ENSMUSG00000020549	Elac2	92	59.031	ENSMAMG00000019957	elac2	97	57.531	Mastacembelus_armatus
ENSMUSG00000020549	Elac2	90	60.748	ENSMZEG00005000530	elac2	89	60.626	Maylandia_zebra
ENSMUSG00000020549	Elac2	100	90.493	ENSMAUG00000019006	Elac2	100	90.493	Mesocricetus_auratus
ENSMUSG00000020549	Elac2	100	85.369	ENSMICG00000002428	ELAC2	100	85.369	Microcebus_murinus
ENSMUSG00000020549	Elac2	100	90.931	ENSMOCG00000014060	Elac2	100	90.931	Microtus_ochrogaster
ENSMUSG00000020549	Elac2	91	56.208	ENSMMOG00000020227	elac2	97	54.545	Mola_mola
ENSMUSG00000020549	Elac2	98	72.482	ENSMODG00000008064	ELAC2	98	72.694	Monodelphis_domestica
ENSMUSG00000020549	Elac2	93	56.865	ENSMALG00000020125	elac2	94	55.090	Monopterus_albus
ENSMUSG00000020549	Elac2	100	98.303	MGP_CAROLIEiJ_G0016509	Elac2	100	98.395	Mus_caroli
ENSMUSG00000020549	Elac2	100	95.879	MGP_PahariEiJ_G0017638	Elac2	100	95.879	Mus_pahari
ENSMUSG00000020549	Elac2	100	98.908	MGP_SPRETEiJ_G0017346	Elac2	100	98.908	Mus_spretus
ENSMUSG00000020549	Elac2	100	81.423	ENSMPUG00000003608	ELAC2	100	81.423	Mustela_putorius_furo
ENSMUSG00000020549	Elac2	100	87.575	ENSNGAG00000021585	Elac2	100	87.575	Nannospalax_galili
ENSMUSG00000020549	Elac2	85	59.130	ENSNBRG00000010410	elac2	94	59.130	Neolamprologus_brichardi
ENSMUSG00000020549	Elac2	100	80.695	ENSNLEG00000014599	ELAC2	100	80.695	Nomascus_leucogenys
ENSMUSG00000020549	Elac2	63	88.194	ENSMEUG00000000013	ELAC2	65	88.194	Notamacropus_eugenii
ENSMUSG00000020549	Elac2	91	88.088	ENSOPRG00000011156	ELAC2	91	88.088	Ochotona_princeps
ENSMUSG00000020549	Elac2	99	85.158	ENSODEG00000000449	ELAC2	100	85.091	Octodon_degus
ENSMUSG00000020549	Elac2	90	60.881	ENSONIG00000009569	elac2	92	60.779	Oreochromis_niloticus
ENSMUSG00000020549	Elac2	96	82.035	ENSOCUG00000012703	ELAC2	96	82.035	Oryctolagus_cuniculus
ENSMUSG00000020549	Elac2	92	58.344	ENSORLG00000001024	elac2	93	57.319	Oryzias_latipes
ENSMUSG00000020549	Elac2	93	58.184	ENSORLG00015008761	elac2	92	58.157	Oryzias_latipes_hsok
ENSMUSG00000020549	Elac2	90	59.329	ENSOMEG00000015065	elac2	92	57.836	Oryzias_melastigma
ENSMUSG00000020549	Elac2	98	84.333	ENSOGAG00000012628	ELAC2	99	84.379	Otolemur_garnettii
ENSMUSG00000020549	Elac2	91	80.637	ENSOARG00000015747	ELAC2	99	80.102	Ovis_aries
ENSMUSG00000020549	Elac2	100	82.473	ENSPPAG00000011633	ELAC2	100	82.473	Pan_paniscus
ENSMUSG00000020549	Elac2	100	80.820	ENSPPRG00000023801	ELAC2	100	80.820	Panthera_pardus
ENSMUSG00000020549	Elac2	100	82.353	ENSPTRG00000008788	ELAC2	100	82.353	Pan_troglodytes
ENSMUSG00000020549	Elac2	100	82.833	ENSPANG00000023751	ELAC2	100	82.833	Papio_anubis
ENSMUSG00000020549	Elac2	90	61.745	ENSPKIG00000014594	elac2	95	59.322	Paramormyrops_kingsleyae
ENSMUSG00000020549	Elac2	92	52.639	ENSPMGG00000007330	elac2	94	52.706	Periophthalmus_magnuspinnatus
ENSMUSG00000020549	Elac2	100	91.052	ENSPEMG00000001670	Elac2	99	91.052	Peromyscus_maniculatus_bairdii
ENSMUSG00000020549	Elac2	99	71.170	ENSPCIG00000009347	ELAC2	98	70.999	Phascolarctos_cinereus
ENSMUSG00000020549	Elac2	91	60.156	ENSPFOG00000003750	elac2	95	59.949	Poecilia_formosa
ENSMUSG00000020549	Elac2	52	61.305	ENSPLAG00000015161	elac2	93	60.899	Poecilia_latipinna
ENSMUSG00000020549	Elac2	91	60.447	ENSPMEG00000023756	elac2	78	75.652	Poecilia_mexicana
ENSMUSG00000020549	Elac2	91	60.315	ENSPREG00000003349	elac2	91	60.103	Poecilia_reticulata
ENSMUSG00000020549	Elac2	100	79.207	ENSPPYG00000007997	ELAC2	100	79.207	Pongo_abelii
ENSMUSG00000020549	Elac2	100	85.369	ENSPCOG00000014581	ELAC2	100	85.369	Propithecus_coquereli
ENSMUSG00000020549	Elac2	77	81.844	ENSPVAG00000017570	ELAC2	79	81.844	Pteropus_vampyrus
ENSMUSG00000020549	Elac2	94	57.383	ENSPNYG00000010837	elac2	94	57.342	Pundamilia_nyererei
ENSMUSG00000020549	Elac2	91	62.351	ENSPNAG00000018524	elac2	90	62.613	Pygocentrus_nattereri
ENSMUSG00000020549	Elac2	100	94.680	ENSRNOG00000003424	Elac2	100	95.042	Rattus_norvegicus
ENSMUSG00000020549	Elac2	100	82.353	ENSRBIG00000021596	ELAC2	100	82.353	Rhinopithecus_bieti
ENSMUSG00000020549	Elac2	100	82.593	ENSRROG00000033226	ELAC2	100	82.593	Rhinopithecus_roxellana
ENSMUSG00000020549	Elac2	100	82.134	ENSSBOG00000016993	ELAC2	100	82.134	Saimiri_boliviensis_boliviensis
ENSMUSG00000020549	Elac2	94	60.660	ENSSFOG00015004103	elac2	90	60.799	Scleropages_formosus
ENSMUSG00000020549	Elac2	91	59.813	ENSSMAG00000012868	elac2	96	58.955	Scophthalmus_maximus
ENSMUSG00000020549	Elac2	92	60.887	ENSSDUG00000023129	elac2	91	60.887	Seriola_dumerili
ENSMUSG00000020549	Elac2	91	60.771	ENSSLDG00000005645	elac2	91	60.887	Seriola_lalandi_dorsalis
ENSMUSG00000020549	Elac2	90	59.626	ENSSPAG00000005674	elac2	91	59.839	Stegastes_partitus
ENSMUSG00000020549	Elac2	100	79.398	ENSSSCG00000028465	ELAC2	100	79.398	Sus_scrofa
ENSMUSG00000020549	Elac2	91	60.212	ENSTRUG00000004076	elac2	94	60.495	Takifugu_rubripes
ENSMUSG00000020549	Elac2	90	60.695	ENSTNIG00000011271	elac2	96	60.841	Tetraodon_nigroviridis
ENSMUSG00000020549	Elac2	100	76.087	ENSTTRG00000002898	ELAC2	100	76.087	Tursiops_truncatus
ENSMUSG00000020549	Elac2	88	74.247	ENSUMAG00000021393	ELAC2	89	74.110	Ursus_maritimus
ENSMUSG00000020549	Elac2	98	79.192	ENSVVUG00000029905	ELAC2	100	78.752	Vulpes_vulpes
ENSMUSG00000020549	Elac2	93	58.883	ENSXETG00000012596	elac2	100	59.006	Xenopus_tropicalis
ENSMUSG00000020549	Elac2	52	60.648	ENSXCOG00000004282	elac2	93	60.310	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004518	nuclease activity	-	IEA	Function
GO:0004519	endonuclease activity	-	IEA	Function
GO:0004549	tRNA-specific ribonuclease activity	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0042645	mitochondrial nucleoid	24703694.	IDA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0072684	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	21873635.	IBA	Process
GO:0072684	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	-	ISO	Process