EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020571 (Gene tree)
Gene ID: 71853
Gene Symbol: Pdia6
Alias: 1700015E05Rik|CaBP5|P5|Txndc7
Full Name: protein disulfide isomerase associated 6
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 18226
Position: chr12: 17266545-17284770
Accession: 1919103
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000057288	-	2175	-	ENSMUSP00000052912	445 (aa)	-	Q3TML0
ENSMUST00000159434	-	738	-	-	- (aa)	-	-
ENSMUST00000163000	-	491	-	-	- (aa)	-	-
ENSMUST00000161853	-	436	-	-	- (aa)	-	-
ENSMUST00000162936	-	1986	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000020571's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020571's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020571	Pdia6	95	53.009	WBGene00015168	pdi-6	99	54.036	Caenorhabditis_elegans
ENSMUSG00000020571	Pdia6	99	95.227	ENSG00000143870	PDIA6	100	95.227	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003756	protein disulfide isomerase activity	-	IEA	Function
GO:0005615	extracellular space	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005788	endoplasmic reticulum lumen	-	ISO	Component
GO:0005790	smooth endoplasmic reticulum	-	ISO	Component
GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0015037	peptide disulfide oxidoreductase activity	-	ISO	Function
GO:0016020	membrane	-	IEA	Component
GO:0016853	isomerase activity	-	IEA	Function
GO:0034663	endoplasmic reticulum chaperone complex	12475965.	IDA	Component
GO:0045454	cell redox homeostasis	-	IEA	Process