EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020657 (Gene tree)
Gene ID: 217378
Gene Symbol: Dnajc27
Alias: C330021A05Rik|Rabj|Rbj
Full Name: DnaJ heat shock protein family (Hsp40) member C27
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 28024 bases
Position: chr12:4082583-4110606
Accession: 2443036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000020986	MMR_HSR1	PF01926.23	4.9e-05	1	1
ENSMUSP00000106803	MMR_HSR1	PF01926.23	4.9e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000049584	-	2934	-	ENSMUSP00000106803	273 (aa)	-	Q8CFP6
ENSMUST00000219923	-	2934	-	ENSMUSP00000151848	273 (aa)	-	Q8CFP6
ENSMUST00000220273	-	620	-	-	- (aa)	-	-
ENSMUST00000020986	-	4698	XM_006515052	ENSMUSP00000020986	273 (aa)	XP_006515115	Q8CFP6

Gene Model

Click here to download ENSMUSG00000020657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000020657	Dnajc27	60	31.325	ENSMUSG00000043463	Rab9b	82	31.325
ENSMUSG00000020657	Dnajc27	60	30.303	ENSMUSG00000004771	Rab11a	74	30.303
ENSMUSG00000020657	Dnajc27	60	36.145	ENSMUSG00000079477	Rab7	94	35.870
ENSMUSG00000020657	Dnajc27	64	30.286	ENSMUSG00000031202	Rab39b	80	30.286
ENSMUSG00000020657	Dnajc27	70	30.693	ENSMUSG00000026878	Rab14	92	30.693
ENSMUSG00000020657	Dnajc27	63	33.714	ENSMUSG00000056515	Rab31	87	33.714
ENSMUSG00000020657	Dnajc27	66	30.220	ENSMUSG00000020732	Rab37	80	30.220
ENSMUSG00000020657	Dnajc27	60	32.927	ENSMUSG00000047187	Rab2a	75	32.927
ENSMUSG00000020657	Dnajc27	56	33.117	ENSMUSG00000031104	Rab33a	63	33.117
ENSMUSG00000020657	Dnajc27	58	31.447	ENSMUSG00000027519	Rab22a	79	31.447
ENSMUSG00000020657	Dnajc27	60	30.909	ENSMUSG00000004768	Rab23	66	30.909
ENSMUSG00000020657	Dnajc27	58	32.278	ENSMUSG00000022159	Rab2b	78	32.692
ENSMUSG00000020657	Dnajc27	61	34.731	ENSMUSG00000073639	Rab18	79	34.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020657	Dnajc27	100	93.407	ENSG00000115137	DNAJC27	100	93.407	Homo_sapiens
ENSMUSG00000020657	Dnajc27	100	83.516	ENSAPOG00000020278	dnajc27	100	83.516	Acanthochromis_polyacanthus
ENSMUSG00000020657	Dnajc27	100	93.796	ENSAMEG00000002554	DNAJC27	100	93.796	Ailuropoda_melanoleuca
ENSMUSG00000020657	Dnajc27	99	82.051	ENSACIG00000009139	dnajc27	100	82.051	Amphilophus_citrinellus
ENSMUSG00000020657	Dnajc27	100	83.516	ENSAOCG00000006604	dnajc27	100	83.516	Amphiprion_ocellaris
ENSMUSG00000020657	Dnajc27	100	83.516	ENSAPEG00000009586	dnajc27	100	83.516	Amphiprion_percula
ENSMUSG00000020657	Dnajc27	100	83.516	ENSATEG00000008796	dnajc27	100	83.516	Anabas_testudineus
ENSMUSG00000020657	Dnajc27	98	90.637	ENSACAG00000010248	DNAJC27	99	90.637	Anolis_carolinensis
ENSMUSG00000020657	Dnajc27	100	93.773	ENSANAG00000032274	DNAJC27	100	93.773	Aotus_nancymaae
ENSMUSG00000020657	Dnajc27	100	83.516	ENSACLG00000004019	dnajc27	100	83.516	Astatotilapia_calliptera
ENSMUSG00000020657	Dnajc27	100	82.784	ENSAMXG00000041488	dnajc27	99	82.784	Astyanax_mexicanus
ENSMUSG00000020657	Dnajc27	100	93.040	ENSBTAG00000018239	DNAJC27	100	93.040	Bos_taurus
ENSMUSG00000020657	Dnajc27	100	93.773	ENSCJAG00000008094	DNAJC27	100	93.773	Callithrix_jacchus
ENSMUSG00000020657	Dnajc27	100	93.066	ENSCAFG00000004098	DNAJC27	100	93.066	Canis_familiaris
ENSMUSG00000020657	Dnajc27	100	93.773	ENSCAFG00020025277	DNAJC27	100	93.773	Canis_lupus_dingo
ENSMUSG00000020657	Dnajc27	100	92.674	ENSCHIG00000013821	DNAJC27	100	92.674	Capra_hircus
ENSMUSG00000020657	Dnajc27	100	93.040	ENSTSYG00000014096	DNAJC27	99	94.318	Carlito_syrichta
ENSMUSG00000020657	Dnajc27	100	93.040	ENSCPOG00000006843	DNAJC27	100	93.040	Cavia_porcellus
ENSMUSG00000020657	Dnajc27	100	93.407	ENSCCAG00000021410	DNAJC27	100	93.407	Cebus_capucinus
ENSMUSG00000020657	Dnajc27	100	93.040	ENSCATG00000029231	DNAJC27	100	93.040	Cercocebus_atys
ENSMUSG00000020657	Dnajc27	100	93.040	ENSCLAG00000008212	DNAJC27	100	93.040	Chinchilla_lanigera
ENSMUSG00000020657	Dnajc27	100	93.407	ENSCSAG00000008536	DNAJC27	100	93.407	Chlorocebus_sabaeus
ENSMUSG00000020657	Dnajc27	100	90.110	ENSCPBG00000022284	DNAJC27	100	90.110	Chrysemys_picta_bellii
ENSMUSG00000020657	Dnajc27	97	64.773	ENSCING00000000917	rbj	99	64.773	Ciona_intestinalis
ENSMUSG00000020657	Dnajc27	97	65.909	ENSCSAVG00000006409	-	99	65.909	Ciona_savignyi
ENSMUSG00000020657	Dnajc27	100	92.308	ENSCANG00000029144	-	100	92.308	Colobus_angolensis_palliatus
ENSMUSG00000020657	Dnajc27	100	96.703	ENSCGRG00001023794	Dnajc27	100	96.703	Cricetulus_griseus_chok1gshd
ENSMUSG00000020657	Dnajc27	100	96.703	ENSCGRG00000007127	Dnajc27	100	96.703	Cricetulus_griseus_crigri
ENSMUSG00000020657	Dnajc27	100	83.516	ENSCSEG00000014284	dnajc27	100	83.516	Cynoglossus_semilaevis
ENSMUSG00000020657	Dnajc27	100	84.249	ENSDARG00000070916	dnajc27	100	84.249	Danio_rerio
ENSMUSG00000020657	Dnajc27	100	92.701	ENSDNOG00000040043	DNAJC27	100	92.701	Dasypus_novemcinctus
ENSMUSG00000020657	Dnajc27	100	95.604	ENSDORG00000015134	Dnajc27	100	95.604	Dipodomys_ordii
ENSMUSG00000020657	Dnajc27	100	93.407	ENSEASG00005010598	DNAJC27	100	93.407	Equus_asinus_asinus
ENSMUSG00000020657	Dnajc27	100	93.773	ENSECAG00000024595	DNAJC27	100	93.773	Equus_caballus
ENSMUSG00000020657	Dnajc27	100	83.150	ENSELUG00000019264	dnajc27	100	83.150	Esox_lucius
ENSMUSG00000020657	Dnajc27	100	93.773	ENSFCAG00000038919	DNAJC27	100	93.773	Felis_catus
ENSMUSG00000020657	Dnajc27	100	74.545	ENSFALG00000012658	DNAJC27	100	74.545	Ficedula_albicollis
ENSMUSG00000020657	Dnajc27	100	90.110	ENSGALG00000028967	DNAJC27	100	90.110	Gallus_gallus
ENSMUSG00000020657	Dnajc27	100	83.150	ENSGACG00000015457	dnajc27	100	83.150	Gasterosteus_aculeatus
ENSMUSG00000020657	Dnajc27	100	93.040	ENSGGOG00000004081	DNAJC27	100	93.040	Gorilla_gorilla
ENSMUSG00000020657	Dnajc27	100	83.516	ENSHBUG00000001491	dnajc27	100	83.516	Haplochromis_burtoni
ENSMUSG00000020657	Dnajc27	100	93.040	ENSHGLG00000013756	DNAJC27	100	93.040	Heterocephalus_glaber_female
ENSMUSG00000020657	Dnajc27	100	93.040	ENSHGLG00100009434	DNAJC27	100	93.040	Heterocephalus_glaber_male
ENSMUSG00000020657	Dnajc27	100	83.516	ENSHCOG00000002948	dnajc27	100	83.516	Hippocampus_comes
ENSMUSG00000020657	Dnajc27	100	83.516	ENSIPUG00000015086	dnajc27	100	83.516	Ictalurus_punctatus
ENSMUSG00000020657	Dnajc27	100	94.872	ENSSTOG00000006080	DNAJC27	100	94.872	Ictidomys_tridecemlineatus
ENSMUSG00000020657	Dnajc27	100	93.040	ENSJJAG00000016683	Dnajc27	100	93.040	Jaculus_jaculus
ENSMUSG00000020657	Dnajc27	100	83.516	ENSKMAG00000011954	dnajc27	100	83.516	Kryptolebias_marmoratus
ENSMUSG00000020657	Dnajc27	100	83.516	ENSLBEG00000028391	dnajc27	100	83.516	Labrus_bergylta
ENSMUSG00000020657	Dnajc27	93	70.037	ENSLBEG00000018738	-	95	69.888	Labrus_bergylta
ENSMUSG00000020657	Dnajc27	100	82.418	ENSLACG00000012994	DNAJC27	100	82.418	Latimeria_chalumnae
ENSMUSG00000020657	Dnajc27	100	83.150	ENSLOCG00000016679	dnajc27	100	83.150	Lepisosteus_oculatus
ENSMUSG00000020657	Dnajc27	100	93.040	ENSLAFG00000002742	DNAJC27	100	93.040	Loxodonta_africana
ENSMUSG00000020657	Dnajc27	100	93.040	ENSMFAG00000043229	DNAJC27	100	93.040	Macaca_fascicularis
ENSMUSG00000020657	Dnajc27	100	93.040	ENSMMUG00000009603	DNAJC27	100	93.040	Macaca_mulatta
ENSMUSG00000020657	Dnajc27	100	83.516	ENSMAMG00000022707	dnajc27	100	83.516	Mastacembelus_armatus
ENSMUSG00000020657	Dnajc27	100	83.516	ENSMZEG00005012058	dnajc27	100	83.516	Maylandia_zebra
ENSMUSG00000020657	Dnajc27	100	95.971	ENSMAUG00000000099	Dnajc27	100	95.971	Mesocricetus_auratus
ENSMUSG00000020657	Dnajc27	100	94.139	ENSMICG00000027424	DNAJC27	100	94.139	Microcebus_murinus
ENSMUSG00000020657	Dnajc27	100	96.350	ENSMOCG00000015357	Dnajc27	100	96.350	Microtus_ochrogaster
ENSMUSG00000020657	Dnajc27	100	87.912	ENSMODG00000015869	DNAJC27	100	87.912	Monodelphis_domestica
ENSMUSG00000020657	Dnajc27	100	83.150	ENSMALG00000001189	dnajc27	100	83.150	Monopterus_albus
ENSMUSG00000020657	Dnajc27	100	99.634	MGP_CAROLIEiJ_G0017579	Dnajc27	100	99.634	Mus_caroli
ENSMUSG00000020657	Dnajc27	64	98.295	MGP_PahariEiJ_G0029339	-	80	98.295	Mus_pahari
ENSMUSG00000020657	Dnajc27	100	99.634	MGP_SPRETEiJ_G0018423	Dnajc27	100	99.634	Mus_spretus
ENSMUSG00000020657	Dnajc27	100	93.407	ENSMPUG00000014032	DNAJC27	100	93.407	Mustela_putorius_furo
ENSMUSG00000020657	Dnajc27	100	91.941	ENSMLUG00000014143	DNAJC27	100	91.941	Myotis_lucifugus
ENSMUSG00000020657	Dnajc27	100	83.516	ENSNBRG00000022552	dnajc27	100	83.516	Neolamprologus_brichardi
ENSMUSG00000020657	Dnajc27	100	93.407	ENSNLEG00000001103	DNAJC27	100	93.407	Nomascus_leucogenys
ENSMUSG00000020657	Dnajc27	100	90.842	ENSOPRG00000008650	DNAJC27	100	90.842	Ochotona_princeps
ENSMUSG00000020657	Dnajc27	100	92.674	ENSODEG00000007488	DNAJC27	100	92.674	Octodon_degus
ENSMUSG00000020657	Dnajc27	96	83.206	ENSONIG00000009008	dnajc27	97	83.206	Oreochromis_niloticus
ENSMUSG00000020657	Dnajc27	100	95.238	ENSOCUG00000011260	DNAJC27	100	95.238	Oryctolagus_cuniculus
ENSMUSG00000020657	Dnajc27	100	82.784	ENSORLG00000001134	dnajc27	100	82.784	Oryzias_latipes
ENSMUSG00000020657	Dnajc27	100	82.784	ENSORLG00020006790	dnajc27	100	82.784	Oryzias_latipes_hni
ENSMUSG00000020657	Dnajc27	100	82.784	ENSORLG00015010005	dnajc27	100	82.784	Oryzias_latipes_hsok
ENSMUSG00000020657	Dnajc27	100	82.418	ENSOMEG00000017890	dnajc27	100	82.418	Oryzias_melastigma
ENSMUSG00000020657	Dnajc27	100	93.773	ENSOGAG00000015168	DNAJC27	100	93.773	Otolemur_garnettii
ENSMUSG00000020657	Dnajc27	100	92.336	ENSOARG00000018127	DNAJC27	100	92.336	Ovis_aries
ENSMUSG00000020657	Dnajc27	100	93.407	ENSPPAG00000031678	DNAJC27	100	93.407	Pan_paniscus
ENSMUSG00000020657	Dnajc27	100	93.773	ENSPPRG00000022920	DNAJC27	100	93.773	Panthera_pardus
ENSMUSG00000020657	Dnajc27	100	93.773	ENSPTIG00000013443	DNAJC27	100	93.773	Panthera_tigris_altaica
ENSMUSG00000020657	Dnajc27	100	93.407	ENSPTRG00000011719	DNAJC27	100	93.407	Pan_troglodytes
ENSMUSG00000020657	Dnajc27	100	92.674	ENSPANG00000023972	DNAJC27	100	92.674	Papio_anubis
ENSMUSG00000020657	Dnajc27	65	82.486	ENSPKIG00000005039	dnajc27	96	82.486	Paramormyrops_kingsleyae
ENSMUSG00000020657	Dnajc27	100	83.150	ENSPKIG00000005931	DNAJC27	100	83.150	Paramormyrops_kingsleyae
ENSMUSG00000020657	Dnajc27	100	90.110	ENSPSIG00000009930	DNAJC27	100	90.110	Pelodiscus_sinensis
ENSMUSG00000020657	Dnajc27	98	74.359	ENSPMAG00000005573	dnajc27	98	74.359	Petromyzon_marinus
ENSMUSG00000020657	Dnajc27	100	88.645	ENSPCIG00000025239	DNAJC27	100	88.645	Phascolarctos_cinereus
ENSMUSG00000020657	Dnajc27	100	82.784	ENSPFOG00000006335	dnajc27	100	82.784	Poecilia_formosa
ENSMUSG00000020657	Dnajc27	100	83.150	ENSPLAG00000008845	dnajc27	100	83.150	Poecilia_latipinna
ENSMUSG00000020657	Dnajc27	100	82.784	ENSPMEG00000018256	dnajc27	100	82.784	Poecilia_mexicana
ENSMUSG00000020657	Dnajc27	66	80.110	ENSPREG00000010228	dnajc27	93	80.110	Poecilia_reticulata
ENSMUSG00000020657	Dnajc27	100	93.407	ENSPPYG00000012594	DNAJC27	100	93.407	Pongo_abelii
ENSMUSG00000020657	Dnajc27	100	94.505	ENSPCOG00000025665	DNAJC27	100	94.505	Propithecus_coquereli
ENSMUSG00000020657	Dnajc27	100	93.773	ENSPVAG00000017520	DNAJC27	100	93.773	Pteropus_vampyrus
ENSMUSG00000020657	Dnajc27	100	83.516	ENSPNYG00000023681	dnajc27	100	83.516	Pundamilia_nyererei
ENSMUSG00000020657	Dnajc27	100	82.784	ENSPNAG00000025619	dnajc27	100	82.784	Pygocentrus_nattereri
ENSMUSG00000020657	Dnajc27	100	97.070	ENSRNOG00000003988	Dnajc27	100	97.070	Rattus_norvegicus
ENSMUSG00000020657	Dnajc27	100	92.674	ENSRBIG00000041935	-	99	93.750	Rhinopithecus_bieti
ENSMUSG00000020657	Dnajc27	100	93.040	ENSRROG00000031027	-	99	94.318	Rhinopithecus_roxellana
ENSMUSG00000020657	Dnajc27	50	89.706	ENSSHAG00000002151	-	93	89.706	Sarcophilus_harrisii
ENSMUSG00000020657	Dnajc27	100	83.150	ENSSFOG00015017512	dnajc27	100	83.150	Scleropages_formosus
ENSMUSG00000020657	Dnajc27	100	83.516	ENSSFOG00015020074	DNAJC27	100	83.516	Scleropages_formosus
ENSMUSG00000020657	Dnajc27	100	83.883	ENSSMAG00000000032	dnajc27	100	83.883	Scophthalmus_maximus
ENSMUSG00000020657	Dnajc27	100	83.516	ENSSDUG00000003036	dnajc27	100	83.516	Seriola_dumerili
ENSMUSG00000020657	Dnajc27	100	83.516	ENSSLDG00000015143	dnajc27	100	83.516	Seriola_lalandi_dorsalis
ENSMUSG00000020657	Dnajc27	58	74.214	ENSSPUG00000006583	DNAJC27	99	74.214	Sphenodon_punctatus
ENSMUSG00000020657	Dnajc27	100	83.150	ENSSPAG00000009154	dnajc27	100	83.150	Stegastes_partitus
ENSMUSG00000020657	Dnajc27	100	93.407	ENSSSCG00000008577	DNAJC27	99	95.455	Sus_scrofa
ENSMUSG00000020657	Dnajc27	100	83.516	ENSTRUG00000023427	dnajc27	100	83.516	Takifugu_rubripes
ENSMUSG00000020657	Dnajc27	100	82.784	ENSTNIG00000006596	dnajc27	100	82.784	Tetraodon_nigroviridis
ENSMUSG00000020657	Dnajc27	100	94.139	ENSTBEG00000005463	DNAJC27	100	94.139	Tupaia_belangeri
ENSMUSG00000020657	Dnajc27	100	92.674	ENSTTRG00000015163	DNAJC27	100	92.674	Tursiops_truncatus
ENSMUSG00000020657	Dnajc27	100	93.773	ENSUAMG00000009585	DNAJC27	100	93.773	Ursus_americanus
ENSMUSG00000020657	Dnajc27	100	93.773	ENSUMAG00000022558	DNAJC27	100	93.773	Ursus_maritimus
ENSMUSG00000020657	Dnajc27	100	86.081	ENSVPAG00000006953	DNAJC27	100	86.081	Vicugna_pacos
ENSMUSG00000020657	Dnajc27	100	93.407	ENSVVUG00000015241	DNAJC27	100	93.407	Vulpes_vulpes
ENSMUSG00000020657	Dnajc27	100	82.418	ENSXCOG00000010812	dnajc27	100	82.418	Xiphophorus_couchianus
ENSMUSG00000020657	Dnajc27	100	82.418	ENSXMAG00000003407	dnajc27	100	82.418	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	24746703.	IDA	Function
GO:0005515	protein binding	24746703.	IPI	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005634	nucleus	24746703.	IDA	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0043410	positive regulation of MAPK cascade	24746703.	IDA	Process
GO:0070374	positive regulation of ERK1 and ERK2 cascade	24746703.	IDA	Process
GO:0071701	regulation of MAPK export from nucleus	24746703.	IDA	Process