EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000020677 (Gene tree)
Gene ID
78394
Gene Symbol
Ddx52
Alias
2700029C06Rik|ROK1
Full Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
21027 bases
Position
chr11:83942062-83963088
Accession
1925644
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000048802ResIIIPF04851.151.3e-0511
ENSMUSP00000048802DEADPF00270.296.9e-3711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000049257-3194-ENSMUSP00000048802598 (aa)-Q8K301
ENSMUST00000130982-553--- (aa)--
Gene Model
Click here to download ENSMUSG00000020677's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020677's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000020677Ddx526831.935ENSMUSG00000001674Ddx185532.990
ENSMUSG00000020677Ddx526331.915ENSMUSG00000032097Ddx67631.915
ENSMUSG00000020677Ddx526631.204ENSMUSG00000020719Ddx56235.345
ENSMUSG00000020677Ddx525833.428ENSMUSG00000030204Ddx478332.011
ENSMUSG00000020677Ddx526130.081ENSMUSG00000057788Ddx497630.081
ENSMUSG00000020677Ddx526632.530ENSMUSG00000039224D1Pas16132.530
ENSMUSG00000020677Ddx525830.900ENSMUSG00000029504Ddx516430.900
ENSMUSG00000020677Ddx526830.456ENSMUSG00000055065Ddx176230.843
ENSMUSG00000020677Ddx526934.135ENSMUSG00000070291Ddx436334.135
ENSMUSG00000020677Ddx526041.071ENSMUSG00000037149Ddx15541.071
ENSMUSG00000020677Ddx527332.648ENSMUSG00000026404Ddx596433.741
ENSMUSG00000020677Ddx527030.222ENSMUSG00000003360Ddx235430.243
ENSMUSG00000020677Ddx526634.069ENSMUSG00000021758Ddx45734.069
ENSMUSG00000020677Ddx526830.733ENSMUSG00000021494Ddx416531.026
ENSMUSG00000020677Ddx526031.768ENSMUSG00000059796Eif4a18731.768
ENSMUSG00000020677Ddx526130.597ENSMUSG00000004393Ddx568033.493
ENSMUSG00000020677Ddx526230.750ENSMUSG00000029389Ddx556330.750
ENSMUSG00000020677Ddx526632.048ENSMUSG00000069045Ddx3y6232.048
ENSMUSG00000020677Ddx526032.044ENSMUSG00000022884Eif4a29030.240
ENSMUSG00000020677Ddx527032.045ENSMUSG00000000787Ddx3x6132.530
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000020677Ddx5210088.333ENSG00000278053DDX529989.474Homo_sapiens
ENSMUSG00000020677Ddx529961.664ENSAPOG00000008759ddx528761.827Acanthochromis_polyacanthus
ENSMUSG00000020677Ddx5210087.500ENSAMEG00000013159DDX5210087.167Ailuropoda_melanoleuca
ENSMUSG00000020677Ddx529264.550ENSACIG00000002843ddx529965.357Amphilophus_citrinellus
ENSMUSG00000020677Ddx5210060.256ENSAOCG00000007983ddx529259.370Amphiprion_ocellaris
ENSMUSG00000020677Ddx5210060.256ENSAOCG00000000356-8960.897Amphiprion_ocellaris
ENSMUSG00000020677Ddx5210060.577ENSAPEG00000023456ddx528961.058Amphiprion_percula
ENSMUSG00000020677Ddx529861.857ENSATEG00000021525ddx528863.306Anabas_testudineus
ENSMUSG00000020677Ddx528476.248ENSACAG00000006395DDX529676.248Anolis_carolinensis
ENSMUSG00000020677Ddx5210088.167ENSANAG00000028587DDX5210088.167Aotus_nancymaae
ENSMUSG00000020677Ddx529961.020ENSACLG00000021447ddx529660.948Astatotilapia_calliptera
ENSMUSG00000020677Ddx529564.007ENSAMXG00000024377ddx529762.273Astyanax_mexicanus
ENSMUSG00000020677Ddx529986.655ENSBTAG00000010313DDX529986.655Bos_taurus
ENSMUSG00000020677Ddx527343.297WBGene00011032R05D11.47143.852Caenorhabditis_elegans
ENSMUSG00000020677Ddx5210087.333ENSCJAG00000015190DDX5210087.333Callithrix_jacchus
ENSMUSG00000020677Ddx5210088.000ENSCAFG00000013554-10088.000Canis_familiaris
ENSMUSG00000020677Ddx5210087.542ENSCAFG00000018145-10087.542Canis_familiaris
ENSMUSG00000020677Ddx529689.081ENSCAFG00020003753DDX529789.081Canis_lupus_dingo
ENSMUSG00000020677Ddx5210087.500ENSCHIG00000006275DDX5210088.316Capra_hircus
ENSMUSG00000020677Ddx5210088.000ENSTSYG00000002996DDX5210088.000Carlito_syrichta
ENSMUSG00000020677Ddx529273.153ENSCAPG00000010436DDX5210071.712Cavia_aperea
ENSMUSG00000020677Ddx5210088.000ENSCPOG00000001232DDX5210088.000Cavia_porcellus
ENSMUSG00000020677Ddx5210088.167ENSCCAG00000023213DDX5210088.167Cebus_capucinus
ENSMUSG00000020677Ddx5210088.833ENSCATG00000041437DDX5210088.833Cercocebus_atys
ENSMUSG00000020677Ddx529988.345ENSCLAG00000016292DDX529988.345Chinchilla_lanigera
ENSMUSG00000020677Ddx5210088.500ENSCSAG00000006122DDX5210088.500Chlorocebus_sabaeus
ENSMUSG00000020677Ddx527391.053ENSCHOG00000007413DDX527391.053Choloepus_hoffmanni
ENSMUSG00000020677Ddx529673.422ENSCPBG00000009806DDX529872.508Chrysemys_picta_bellii
ENSMUSG00000020677Ddx527750.524ENSCING00000016218-10050.524Ciona_intestinalis
ENSMUSG00000020677Ddx526554.987ENSCSAVG00000003835-9854.774Ciona_savignyi
ENSMUSG00000020677Ddx5210088.000ENSCANG00000035140DDX5210088.000Colobus_angolensis_palliatus
ENSMUSG00000020677Ddx5210093.489ENSCGRG00001020695Ddx5210093.990Cricetulus_griseus_chok1gshd
ENSMUSG00000020677Ddx5210093.322ENSCGRG00000008830Ddx5210093.823Cricetulus_griseus_crigri
ENSMUSG00000020677Ddx5210059.871ENSCSEG00000010008ddx529260.194Cynoglossus_semilaevis
ENSMUSG00000020677Ddx529665.630ENSCVAG00000005302ddx5210064.883Cyprinodon_variegatus
ENSMUSG00000020677Ddx529663.328ENSDARG00000100505ddx529863.018Danio_rerio
ENSMUSG00000020677Ddx5210086.567ENSDNOG00000047454DDX5210086.567Dasypus_novemcinctus
ENSMUSG00000020677Ddx5210088.462ENSDORG00000004276Ddx5210088.462Dipodomys_ordii
ENSMUSG00000020677Ddx529979.223ENSETEG00000016042DDX529979.392Echinops_telfairi
ENSMUSG00000020677Ddx526442.289ENSEBUG00000010838-9143.577Eptatretus_burgeri
ENSMUSG00000020677Ddx529987.605ENSEASG00005011275DDX529287.605Equus_asinus_asinus
ENSMUSG00000020677Ddx5210087.833ENSECAG00000012286DDX5210087.833Equus_caballus
ENSMUSG00000020677Ddx5272100.000ENSEEUG00000001153DDX526884.146Erinaceus_europaeus
ENSMUSG00000020677Ddx529263.298ENSELUG00000018002ddx529964.235Esox_lucius
ENSMUSG00000020677Ddx5210088.500ENSFCAG00000010573DDX5210088.500Felis_catus
ENSMUSG00000020677Ddx529772.559ENSFALG00000005155DDX529872.241Ficedula_albicollis
ENSMUSG00000020677Ddx5210078.405ENSFDAG00000011133-10078.275Fukomys_damarensis
ENSMUSG00000020677Ddx5210086.379ENSFDAG00000008340-10086.379Fukomys_damarensis
ENSMUSG00000020677Ddx529963.054ENSFHEG00000017239ddx529363.132Fundulus_heteroclitus
ENSMUSG00000020677Ddx529660.653ENSGMOG00000014879ddx529961.352Gadus_morhua
ENSMUSG00000020677Ddx529773.390ENSGALG00000005489DDX529871.808Gallus_gallus
ENSMUSG00000020677Ddx529962.399ENSGAFG00000000702ddx529562.745Gambusia_affinis
ENSMUSG00000020677Ddx529663.495ENSGACG00000020624ddx529970.127Gasterosteus_aculeatus
ENSMUSG00000020677Ddx529671.973ENSGAGG00000007234DDX529770.340Gopherus_agassizii
ENSMUSG00000020677Ddx5210088.667ENSGGOG00000028224DDX5210088.667Gorilla_gorilla
ENSMUSG00000020677Ddx529959.420ENSHBUG00000015638ddx529160.227Haplochromis_burtoni
ENSMUSG00000020677Ddx529370.578ENSHGLG00000019205-9670.578Heterocephalus_glaber_female
ENSMUSG00000020677Ddx529987.374ENSHGLG00000006235-9987.374Heterocephalus_glaber_female
ENSMUSG00000020677Ddx527692.308ENSHGLG00100013765-8492.308Heterocephalus_glaber_male
ENSMUSG00000020677Ddx529370.578ENSHGLG00100018699-9770.578Heterocephalus_glaber_male
ENSMUSG00000020677Ddx529760.929ENSHCOG00000007966ddx529560.929Hippocampus_comes
ENSMUSG00000020677Ddx529661.564ENSIPUG00000008623ddx529663.697Ictalurus_punctatus
ENSMUSG00000020677Ddx525593.358ENSSTOG00000002550DDX529993.358Ictidomys_tridecemlineatus
ENSMUSG00000020677Ddx5210089.149ENSJJAG00000021877Ddx5210089.149Jaculus_jaculus
ENSMUSG00000020677Ddx529663.497ENSKMAG00000022270ddx529774.874Kryptolebias_marmoratus
ENSMUSG00000020677Ddx5210059.289ENSLBEG00000015403ddx529159.902Labrus_bergylta
ENSMUSG00000020677Ddx529671.184ENSLACG00000012514DDX529769.983Latimeria_chalumnae
ENSMUSG00000020677Ddx527573.118ENSLOCG00000005928ddx529670.833Lepisosteus_oculatus
ENSMUSG00000020677Ddx529779.623ENSLAFG00000002635DDX5210094.872Loxodonta_africana
ENSMUSG00000020677Ddx5210088.833ENSMFAG00000000640DDX5210088.833Macaca_fascicularis
ENSMUSG00000020677Ddx5210088.500ENSMMUG00000002980DDX5210088.500Macaca_mulatta
ENSMUSG00000020677Ddx5210088.667ENSMNEG00000043658DDX5210088.667Macaca_nemestrina
ENSMUSG00000020677Ddx5210088.333ENSMLEG00000017518DDX5210088.333Mandrillus_leucophaeus
ENSMUSG00000020677Ddx529961.129ENSMAMG00000019719ddx529260.806Mastacembelus_armatus
ENSMUSG00000020677Ddx529959.098ENSMZEG00005019044ddx529159.903Maylandia_zebra
ENSMUSG00000020677Ddx529075.735ENSMGAG00000008091DDX528580.894Meleagris_gallopavo
ENSMUSG00000020677Ddx5210086.116ENSMAUG00000021084Ddx5210085.008Mesocricetus_auratus
ENSMUSG00000020677Ddx529682.149ENSMICG00000004290-9982.149Microcebus_murinus
ENSMUSG00000020677Ddx5210092.988ENSMOCG00000009654Ddx5210093.155Microtus_ochrogaster
ENSMUSG00000020677Ddx529962.881ENSMMOG00000018825ddx529062.732Mola_mola
ENSMUSG00000020677Ddx529979.867ENSMODG00000002493DDX529879.867Monodelphis_domestica
ENSMUSG00000020677Ddx528069.665ENSMALG00000007621ddx528169.375Monopterus_albus
ENSMUSG00000020677Ddx5210098.662MGP_CAROLIEiJ_G0016888Ddx5210098.662Mus_caroli
ENSMUSG00000020677Ddx5210096.823MGP_PahariEiJ_G0018018Ddx5210096.823Mus_pahari
ENSMUSG00000020677Ddx5210099.498MGP_SPRETEiJ_G0017733Ddx5210099.498Mus_spretus
ENSMUSG00000020677Ddx5210087.833ENSMPUG00000015007DDX5210087.833Mustela_putorius_furo
ENSMUSG00000020677Ddx528289.817ENSMLUG00000024480-9990.349Myotis_lucifugus
ENSMUSG00000020677Ddx5210085.857ENSMLUG00000007167-10086.023Myotis_lucifugus
ENSMUSG00000020677Ddx5210090.134ENSNGAG00000020686Ddx5210090.134Nannospalax_galili
ENSMUSG00000020677Ddx528269.106ENSNBRG00000007750ddx528769.057Neolamprologus_brichardi
ENSMUSG00000020677Ddx5210087.833ENSNLEG00000002826DDX5210087.833Nomascus_leucogenys
ENSMUSG00000020677Ddx526590.000ENSMEUG00000011234DDX529890.000Notamacropus_eugenii
ENSMUSG00000020677Ddx5210077.741ENSOPRG00000003899DDX5210078.073Ochotona_princeps
ENSMUSG00000020677Ddx529783.677ENSODEG00000012814-10083.677Octodon_degus
ENSMUSG00000020677Ddx529981.481ENSODEG00000002857-9980.640Octodon_degus
ENSMUSG00000020677Ddx529961.084ENSONIG00000004869ddx529761.438Oreochromis_niloticus
ENSMUSG00000020677Ddx529477.931ENSOANG00000007133DDX529777.759Ornithorhynchus_anatinus
ENSMUSG00000020677Ddx5210087.000ENSOCUG00000014532DDX5210087.000Oryctolagus_cuniculus
ENSMUSG00000020677Ddx529663.951ENSORLG00000005241ddx529362.273Oryzias_latipes
ENSMUSG00000020677Ddx529663.311ENSORLG00015015546ddx529161.526Oryzias_latipes_hsok
ENSMUSG00000020677Ddx529960.948ENSOMEG00000017602ddx529261.438Oryzias_melastigma
ENSMUSG00000020677Ddx529783.677ENSOGAG00000000868DDX529983.677Otolemur_garnettii
ENSMUSG00000020677Ddx5210087.667ENSOARG00000002998DDX5210087.667Ovis_aries
ENSMUSG00000020677Ddx5210087.000ENSPPAG00000028453DDX5210086.833Pan_paniscus
ENSMUSG00000020677Ddx5210087.000ENSPPRG00000009742DDX5210087.000Panthera_pardus
ENSMUSG00000020677Ddx5210086.833ENSPTIG00000013697DDX5210086.833Panthera_tigris_altaica
ENSMUSG00000020677Ddx5210088.333ENSPTRG00000009058DDX5210088.333Pan_troglodytes
ENSMUSG00000020677Ddx5210088.500ENSPANG00000022101DDX5210088.500Papio_anubis
ENSMUSG00000020677Ddx529864.081ENSPKIG00000013058ddx529863.636Paramormyrops_kingsleyae
ENSMUSG00000020677Ddx529674.742ENSPSIG00000010226DDX529973.588Pelodiscus_sinensis
ENSMUSG00000020677Ddx527869.658ENSPMGG00000005458ddx529469.017Periophthalmus_magnuspinnatus
ENSMUSG00000020677Ddx5210092.487ENSPEMG00000003263Ddx5210092.487Peromyscus_maniculatus_bairdii
ENSMUSG00000020677Ddx529979.000ENSPCIG00000017730DDX529079.000Phascolarctos_cinereus
ENSMUSG00000020677Ddx529664.846ENSPFOG00000018378ddx529262.664Poecilia_formosa
ENSMUSG00000020677Ddx529664.846ENSPLAG00000008368ddx529262.664Poecilia_latipinna
ENSMUSG00000020677Ddx529664.846ENSPMEG00000002359ddx529262.664Poecilia_mexicana
ENSMUSG00000020677Ddx529664.948ENSPREG00000016874ddx529263.742Poecilia_reticulata
ENSMUSG00000020677Ddx5210088.186ENSPPYG00000008221DDX5210088.186Pongo_abelii
ENSMUSG00000020677Ddx529877.834ENSPCAG00000005814DDX529977.834Procavia_capensis
ENSMUSG00000020677Ddx5210085.833ENSPVAG00000010462DDX5210085.833Pteropus_vampyrus
ENSMUSG00000020677Ddx529962.034ENSPNYG00000020730ddx529662.309Pundamilia_nyererei
ENSMUSG00000020677Ddx529662.732ENSPNAG00000014707ddx529662.167Pygocentrus_nattereri
ENSMUSG00000020677Ddx5210094.816ENSRNOG00000002612Ddx5210094.816Rattus_norvegicus
ENSMUSG00000020677Ddx5210081.000ENSRBIG00000032462DDX5210081.000Rhinopithecus_bieti
ENSMUSG00000020677Ddx5210082.000ENSRROG00000034760DDX5210082.000Rhinopithecus_roxellana
ENSMUSG00000020677Ddx529940.065YGL171W-9939.742Saccharomyces_cerevisiae
ENSMUSG00000020677Ddx5210087.333ENSSBOG00000035787DDX5210087.167Saimiri_boliviensis_boliviensis
ENSMUSG00000020677Ddx529979.333ENSSHAG00000013962DDX529779.333Sarcophilus_harrisii
ENSMUSG00000020677Ddx529962.540ENSSFOG00015005055ddx529963.402Scleropages_formosus
ENSMUSG00000020677Ddx529661.102ENSSMAG00000009788ddx529161.138Scophthalmus_maximus
ENSMUSG00000020677Ddx529663.238ENSSDUG00000004022ddx529162.914Seriola_dumerili
ENSMUSG00000020677Ddx529663.790ENSSLDG00000016999ddx529461.912Seriola_lalandi_dorsalis
ENSMUSG00000020677Ddx527596.429ENSSARG00000000371-7496.324Sorex_araneus
ENSMUSG00000020677Ddx529672.803ENSSPUG00000000720DDX529871.795Sphenodon_punctatus
ENSMUSG00000020677Ddx529662.063ENSSPAG00000014211ddx528961.049Stegastes_partitus
ENSMUSG00000020677Ddx5210088.000ENSSSCG00000021275DDX5210088.000Sus_scrofa
ENSMUSG00000020677Ddx529773.162ENSTGUG00000008303-10073.162Taeniopygia_guttata
ENSMUSG00000020677Ddx529662.919ENSTRUG00000017071ddx528663.087Takifugu_rubripes
ENSMUSG00000020677Ddx529964.141ENSTNIG00000009990ddx5210063.468Tetraodon_nigroviridis
ENSMUSG00000020677Ddx527679.931ENSTBEG00000005982DDX527679.931Tupaia_belangeri
ENSMUSG00000020677Ddx5210087.333ENSTTRG00000008917DDX5210087.333Tursiops_truncatus
ENSMUSG00000020677Ddx5210086.667ENSVPAG00000001979DDX5210086.667Vicugna_pacos
ENSMUSG00000020677Ddx5210088.333ENSVVUG00000020209DDX529894.328Vulpes_vulpes
ENSMUSG00000020677Ddx529771.743ENSXETG00000025903ddx5210071.743Xenopus_tropicalis
ENSMUSG00000020677Ddx529962.787ENSXMAG00000010805ddx529363.072Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0004386helicase activity-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0016787hydrolase activity-IEAFunction

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