EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020680 (Gene tree)
Gene ID: 70439
Gene Symbol: Taf15
Alias: 2610111C21Rik|68kDa|TAFII68|Taf2n
Full Name: TATA-box binding protein associated factor 15
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 33658 bases
Position: chr11:83473086-83506743
Accession: 1917689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000119836	zf-RanBP	PF00641.18	8.7e-07	1	1
ENSMUSP00000021018	zf-RanBP	PF00641.18	1.7e-06	1	1
ENSMUSP00000119836	RRM_1	PF00076.22	1e-10	1	1
ENSMUSP00000021018	RRM_1	PF00076.22	3.1e-10	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000021018	-	2068	XM_006534185	ENSMUSP00000021018	557 (aa)	XP_006534248	Q8BQ46
ENSMUST00000152405	-	649	-	-	- (aa)	-	-
ENSMUST00000126134	-	848	-	-	- (aa)	-	-
ENSMUST00000133170	-	1260	XM_011249252	ENSMUSP00000119836	324 (aa)	XP_011247554	F6QCI0
ENSMUST00000134185	-	881	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000020680's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03022	Basal transcription factors	KEGG
mmu05202	Transcriptional misregulation in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000020680	Taf15	54	42.986	ENSMUSG00000009079	Ewsr1	51	40.230
ENSMUSG00000020680	Taf15	71	54.878	ENSMUSG00000030795	Fus	93	54.658

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020680	Taf15	71	98.253	ENSG00000270647	TAF15	100	90.496	Homo_sapiens
ENSMUSG00000020680	Taf15	70	93.893	ENSAMEG00000014860	TAF15	69	93.893	Ailuropoda_melanoleuca
ENSMUSG00000020680	Taf15	61	87.310	ENSAPLG00000006217	TAF15	90	72.622	Anas_platyrhynchos
ENSMUSG00000020680	Taf15	70	95.685	ENSANAG00000020904	TAF15	71	92.386	Aotus_nancymaae
ENSMUSG00000020680	Taf15	100	90.709	ENSCJAG00000014961	TAF15	100	90.709	Callithrix_jacchus
ENSMUSG00000020680	Taf15	70	96.183	ENSCAFG00000018176	TAF15	69	96.183	Canis_familiaris
ENSMUSG00000020680	Taf15	70	96.183	ENSCAFG00020004027	TAF15	70	96.183	Canis_lupus_dingo
ENSMUSG00000020680	Taf15	72	86.638	ENSCHIG00000019985	-	77	91.749	Capra_hircus
ENSMUSG00000020680	Taf15	100	92.573	ENSTSYG00000003930	TAF15	100	92.573	Carlito_syrichta
ENSMUSG00000020680	Taf15	70	93.833	ENSCAPG00000002530	-	66	91.333	Cavia_aperea
ENSMUSG00000020680	Taf15	70	93.833	ENSCPOG00000010259	-	66	91.000	Cavia_porcellus
ENSMUSG00000020680	Taf15	70	88.071	ENSCCAG00000036025	TAF15	73	88.095	Cebus_capucinus
ENSMUSG00000020680	Taf15	71	98.690	ENSCATG00000044848	TAF15	75	97.321	Cercocebus_atys
ENSMUSG00000020680	Taf15	67	95.200	ENSCLAG00000008940	TAF15	67	95.200	Chinchilla_lanigera
ENSMUSG00000020680	Taf15	70	95.685	ENSCSAG00000006241	TAF15	66	95.685	Chlorocebus_sabaeus
ENSMUSG00000020680	Taf15	67	90.933	ENSCHOG00000002729	TAF15	60	90.933	Choloepus_hoffmanni
ENSMUSG00000020680	Taf15	69	73.317	ENSCPBG00000027820	TAF15	90	75.184	Chrysemys_picta_bellii
ENSMUSG00000020680	Taf15	70	99.119	ENSCANG00000038846	-	84	98.187	Colobus_angolensis_palliatus
ENSMUSG00000020680	Taf15	61	96.970	ENSCANG00000042639	-	84	94.389	Colobus_angolensis_palliatus
ENSMUSG00000020680	Taf15	70	91.582	ENSCGRG00001012011	Taf15	67	91.582	Cricetulus_griseus_chok1gshd
ENSMUSG00000020680	Taf15	99	96.768	ENSCGRG00000005110	Taf15	100	96.768	Cricetulus_griseus_crigri
ENSMUSG00000020680	Taf15	70	96.692	ENSDNOG00000006956	TAF15	73	96.692	Dasypus_novemcinctus
ENSMUSG00000020680	Taf15	70	88.010	ENSDORG00000014619	Taf15	68	85.714	Dipodomys_ordii
ENSMUSG00000020680	Taf15	86	97.765	ENSETEG00000001337	TAF15	64	94.413	Echinops_telfairi
ENSMUSG00000020680	Taf15	70	96.947	ENSEASG00005011235	TAF15	78	96.947	Equus_asinus_asinus
ENSMUSG00000020680	Taf15	70	96.947	ENSECAG00000000718	TAF15	66	96.947	Equus_caballus
ENSMUSG00000020680	Taf15	71	93.450	ENSFCAG00000018167	TAF15	76	94.345	Felis_catus
ENSMUSG00000020680	Taf15	59	89.062	ENSFALG00000009696	TAF15	90	77.284	Ficedula_albicollis
ENSMUSG00000020680	Taf15	70	94.911	ENSFDAG00000008577	TAF15	71	94.911	Fukomys_damarensis
ENSMUSG00000020680	Taf15	60	88.601	ENSGALG00000002060	TAF15	90	73.318	Gallus_gallus
ENSMUSG00000020680	Taf15	71	98.253	ENSGGOG00000005693	TAF15	75	96.726	Gorilla_gorilla
ENSMUSG00000020680	Taf15	70	94.656	ENSHGLG00000005292	-	71	94.656	Heterocephalus_glaber_female
ENSMUSG00000020680	Taf15	70	75.064	ENSHGLG00000002551	-	84	72.265	Heterocephalus_glaber_female
ENSMUSG00000020680	Taf15	70	75.064	ENSHGLG00100002825	-	84	72.265	Heterocephalus_glaber_male
ENSMUSG00000020680	Taf15	68	94.709	ENSHGLG00100013953	-	69	94.709	Heterocephalus_glaber_male
ENSMUSG00000020680	Taf15	100	94.386	ENSSTOG00000002081	TAF15	100	94.386	Ictidomys_tridecemlineatus
ENSMUSG00000020680	Taf15	79	88.428	ENSJJAG00000010606	Taf15	67	94.615	Jaculus_jaculus
ENSMUSG00000020680	Taf15	57	72.821	ENSLACG00000018479	-	97	56.291	Latimeria_chalumnae
ENSMUSG00000020680	Taf15	70	95.165	ENSLAFG00000018332	TAF15	67	95.165	Loxodonta_africana
ENSMUSG00000020680	Taf15	70	96.193	ENSMFAG00000041941	TAF15	67	96.193	Macaca_fascicularis
ENSMUSG00000020680	Taf15	70	96.193	ENSMMUG00000047780	TAF15	67	96.193	Macaca_mulatta
ENSMUSG00000020680	Taf15	72	95.299	ENSMMUG00000047590	-	63	92.112	Macaca_mulatta
ENSMUSG00000020680	Taf15	100	90.709	ENSMNEG00000044227	TAF15	100	90.709	Macaca_nemestrina
ENSMUSG00000020680	Taf15	71	98.690	ENSMLEG00000028534	TAF15	75	97.321	Mandrillus_leucophaeus
ENSMUSG00000020680	Taf15	60	85.279	ENSMGAG00000003842	TAF15	84	69.037	Meleagris_gallopavo
ENSMUSG00000020680	Taf15	54	97.659	ENSMAUG00000018137	-	100	97.659	Mesocricetus_auratus
ENSMUSG00000020680	Taf15	70	95.929	ENSMICG00000017057	TAF15	67	95.929	Microcebus_murinus
ENSMUSG00000020680	Taf15	70	97.455	ENSMOCG00000015121	Taf15	70	97.455	Microtus_ochrogaster
ENSMUSG00000020680	Taf15	70	90.863	ENSMODG00000019123	TAF15	88	91.624	Monodelphis_domestica
ENSMUSG00000020680	Taf15	100	94.349	MGP_CAROLIEiJ_G0016876	Taf15	100	94.349	Mus_caroli
ENSMUSG00000020680	Taf15	99	94.118	MGP_PahariEiJ_G0018007	Taf15	100	94.118	Mus_pahari
ENSMUSG00000020680	Taf15	100	96.864	MGP_SPRETEiJ_G0017720	Taf15	100	96.864	Mus_spretus
ENSMUSG00000020680	Taf15	67	96.000	ENSMPUG00000014948	TAF15	85	96.000	Mustela_putorius_furo
ENSMUSG00000020680	Taf15	70	95.674	ENSMLUG00000002870	TAF15	100	89.785	Myotis_lucifugus
ENSMUSG00000020680	Taf15	70	92.092	ENSNGAG00000017633	-	66	92.092	Nannospalax_galili
ENSMUSG00000020680	Taf15	61	89.899	ENSNGAG00000019473	-	69	85.714	Nannospalax_galili
ENSMUSG00000020680	Taf15	71	96.943	ENSNLEG00000014063	TAF15	75	95.833	Nomascus_leucogenys
ENSMUSG00000020680	Taf15	60	88.660	ENSMEUG00000006009	-	54	89.912	Notamacropus_eugenii
ENSMUSG00000020680	Taf15	69	85.052	ENSODEG00000001772	-	74	84.794	Octodon_degus
ENSMUSG00000020680	Taf15	69	86.753	ENSODEG00000004747	-	76	87.003	Octodon_degus
ENSMUSG00000020680	Taf15	70	99.559	ENSODEG00000012915	-	75	97.273	Octodon_degus
ENSMUSG00000020680	Taf15	99	66.265	ENSOANG00000014273	TAF15	85	70.395	Ornithorhynchus_anatinus
ENSMUSG00000020680	Taf15	70	97.442	ENSOCUG00000002838	TAF15	66	97.442	Oryctolagus_cuniculus
ENSMUSG00000020680	Taf15	71	94.924	ENSOGAG00000011719	TAF15	67	94.911	Otolemur_garnettii
ENSMUSG00000020680	Taf15	70	92.875	ENSOARG00000000081	-	76	92.875	Ovis_aries
ENSMUSG00000020680	Taf15	77	89.559	ENSOARG00000005512	-	87	95.918	Ovis_aries
ENSMUSG00000020680	Taf15	71	98.253	ENSPPAG00000043510	-	75	96.726	Pan_paniscus
ENSMUSG00000020680	Taf15	70	96.692	ENSPPRG00000003286	TAF15	68	96.692	Panthera_pardus
ENSMUSG00000020680	Taf15	71	98.690	ENSPTIG00000016445	TAF15	76	97.904	Panthera_tigris_altaica
ENSMUSG00000020680	Taf15	71	98.253	ENSPTRG00000009026	TAF15	75	96.726	Pan_troglodytes
ENSMUSG00000020680	Taf15	71	98.690	ENSPANG00000022930	TAF15	75	97.321	Papio_anubis
ENSMUSG00000020680	Taf15	70	71.960	ENSPSIG00000014222	TAF15	90	73.839	Pelodiscus_sinensis
ENSMUSG00000020680	Taf15	70	94.643	ENSPEMG00000018715	Taf15	67	94.643	Peromyscus_maniculatus_bairdii
ENSMUSG00000020680	Taf15	70	92.132	ENSPCIG00000003783	TAF15	71	92.893	Phascolarctos_cinereus
ENSMUSG00000020680	Taf15	70	94.416	ENSPPYG00000008194	TAF15	63	94.416	Pongo_abelii
ENSMUSG00000020680	Taf15	58	99.468	ENSPCAG00000009582	TAF15	63	86.514	Procavia_capensis
ENSMUSG00000020680	Taf15	70	95.674	ENSPCOG00000007032	TAF15	67	95.674	Propithecus_coquereli
ENSMUSG00000020680	Taf15	61	98.990	ENSPVAG00000003952	TAF15	53	99.138	Pteropus_vampyrus
ENSMUSG00000020680	Taf15	91	96.660	ENSRNOG00000058393	Taf15	90	96.660	Rattus_norvegicus
ENSMUSG00000020680	Taf15	70	98.977	ENSRNOG00000054871	LOC103694865	70	98.980	Rattus_norvegicus
ENSMUSG00000020680	Taf15	71	98.690	ENSRBIG00000043192	TAF15	75	97.321	Rhinopithecus_bieti
ENSMUSG00000020680	Taf15	71	98.690	ENSRROG00000029426	TAF15	75	97.321	Rhinopithecus_roxellana
ENSMUSG00000020680	Taf15	70	97.797	ENSSBOG00000019731	-	77	95.178	Saimiri_boliviensis_boliviensis
ENSMUSG00000020680	Taf15	60	98.980	ENSSBOG00000032185	-	59	98.980	Saimiri_boliviensis_boliviensis
ENSMUSG00000020680	Taf15	70	92.640	ENSSHAG00000003105	TAF15	86	83.218	Sarcophilus_harrisii
ENSMUSG00000020680	Taf15	84	87.045	ENSSARG00000012092	TAF15	69	94.911	Sorex_araneus
ENSMUSG00000020680	Taf15	60	78.713	ENSSPUG00000006042	TAF15	90	65.991	Sphenodon_punctatus
ENSMUSG00000020680	Taf15	70	96.183	ENSSSCG00000017707	TAF15	65	96.183	Sus_scrofa
ENSMUSG00000020680	Taf15	61	88.832	ENSTGUG00000004702	TAF15	93	78.589	Taeniopygia_guttata
ENSMUSG00000020680	Taf15	61	98.485	ENSTTRG00000014145	TAF15	71	96.183	Tursiops_truncatus
ENSMUSG00000020680	Taf15	60	93.814	ENSUAMG00000004942	TAF15	74	93.617	Ursus_americanus
ENSMUSG00000020680	Taf15	70	95.674	ENSUMAG00000016876	TAF15	69	95.674	Ursus_maritimus
ENSMUSG00000020680	Taf15	58	91.975	ENSVPAG00000001667	TAF15	53	91.975	Vicugna_pacos
ENSMUSG00000020680	Taf15	70	96.183	ENSVVUG00000020375	TAF15	70	96.183	Vulpes_vulpes
ENSMUSG00000020680	Taf15	55	60.513	ENSXETG00000013477	taf15	92	48.632	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0008150	biological_process	-	ND	Process