EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020717 (Gene tree)
Gene ID: 18613
Gene Symbol: Pecam1
Alias: Cd31|PECAM-1
Full Name: platelet/endothelial cell adhesion molecule 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 96412
Position: chr11: 106654217-106750628
Accession: 97537
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000135481	-	681	-	-	- (aa)	-	-
ENSMUST00000080853	-	3283	-	ENSMUSP00000079664	716 (aa)	-	Q08481
ENSMUST00000103069	-	3233	XM_006532474	ENSMUSP00000099358	697 (aa)	XP_006532537	Q08481
ENSMUST00000184424	-	2142	-	-	- (aa)	-	-
ENSMUST00000183610	-	3006	-	ENSMUSP00000138959	626 (aa)	-	Q08481
ENSMUST00000124958	-	1020	-	ENSMUSP00000122414	317 (aa)	-	B1ARA9
ENSMUST00000106796	-	3441	XM_006532472	ENSMUSP00000102408	727 (aa)	XP_006532535	Q08481
ENSMUST00000068021	-	2977	-	ENSMUSP00000067111	732 (aa)	-	B1ARB3

Gene Model

Click here to download ENSMUSG00000020717's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04514	Cell adhesion molecules (CAMs)	KEGG
mmu04670	Leukocyte transendothelial migration	KEGG
mmu05144	Malaria	KEGG
mmu05418	Fluid shear stress and atherosclerosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020717's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001525	angiogenesis	17563397.	IDA	Process
GO:0001525	angiogenesis	17563397.	IMP	Process
GO:0001726	ruffle	-	ISO	Component
GO:0001886	endothelial cell morphogenesis	17563397.	IMP	Process
GO:0002687	positive regulation of leukocyte migration	-	ISO	Process
GO:0002693	positive regulation of cellular extravasation	-	ISO	Process
GO:0005515	protein binding	10562326.11254359.20724702.	IPI	Function
GO:0005615	extracellular space	-	ISO	Component
GO:0005737	cytoplasm	20724702.	IDA	Component
GO:0005886	plasma membrane	12736726.16251442.	IDA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006909	phagocytosis	-	ISO	Process
GO:0007155	cell adhesion	20724702.	IDA	Process
GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	-	ISO	Process
GO:0007159	leukocyte cell-cell adhesion	-	ISO	Process
GO:0007266	Rho protein signal transduction	12890700.	IMP	Process
GO:0009897	external side of plasma membrane	16455951.20620994.21708977.24009720.	IDA	Component
GO:0009986	cell surface	-	ISO	Component
GO:0016020	membrane	16691571.	IDA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0019903	protein phosphatase binding	-	ISO	Function
GO:0030054	cell junction	-	IEA	Component
GO:0030334	regulation of cell migration	12890700.	IMP	Process
GO:0030485	smooth muscle contractile fiber	18332105.	IDA	Component
GO:0030837	negative regulation of actin filament polymerization	-	ISO	Process
GO:0034260	negative regulation of GTPase activity	-	ISO	Process
GO:0035696	monocyte extravasation	-	ISO	Process
GO:0042060	wound healing	12890700.	IMP	Process
GO:0042531	positive regulation of tyrosine phosphorylation of STAT protein	11254359.	IDA	Process
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0043542	endothelial cell migration	17563397.	IDA	Process
GO:0043542	endothelial cell migration	17563397.	IMP	Process
GO:0044291	cell-cell contact zone	20724702.	IDA	Component
GO:0045121	membrane raft	12890700.	IDA	Component
GO:0050732	negative regulation of peptidyl-tyrosine phosphorylation	-	ISO	Process
GO:0050904	diapedesis	-	ISO	Process
GO:0071944	cell periphery	21464233.	IDA	Component
GO:0072672	neutrophil extravasation	-	ISO	Process
GO:0090673	endothelial cell-matrix adhesion	17563397.	IMP	Process
GO:0098742	cell-cell adhesion via plasma-membrane adhesion molecules	-	ISO	Process