EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020738 (Gene tree)
Gene ID: 170930
Gene Symbol: Sumo2
Alias: Smt3b|Smt3h2
Full Name: small ubiquitin-like modifier 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 13175
Position: chr11: 115523102-115536276
Accession: 2158813
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000118155	-	884	-	ENSMUSP00000113108	71 (aa)	-	D3Z794
ENSMUST00000153892	-	1051	-	ENSMUSP00000115044	95 (aa)	-	P61957
ENSMUST00000117589	-	987	-	ENSMUSP00000113883	52 (aa)	-	D3YW94
ENSMUST00000021084	-	1000	-	ENSMUSP00000021084	53 (aa)	-	H7BWX9
ENSMUST00000140844	-	680	-	-	- (aa)	-	-
ENSMUST00000121185	-	911	-	ENSMUSP00000112594	52 (aa)	-	D3YW94
ENSMUST00000050672	-	397	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000020738's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG
mmu05418	Fluid shear stress and atherosclerosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020738's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020738	Sumo2	100	100.000	ENSG00000188612	SUMO2	100	100.000	Homo_sapiens
ENSMUSG00000020738	Sumo2	99	100.000	ENSG00000184900	SUMO3	90	96.809	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001222	transcription corepressor binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0016605	PML body	-	ISO	Component
GO:0016925	protein sumoylation	21873635.	IBA	Process
GO:0016925	protein sumoylation	15767674.18644859.	IDA	Process
GO:0016925	protein sumoylation	-	ISO	Process
GO:0019789	SUMO transferase activity	15767674.18644859.	IDA	Function
GO:0031386	protein tag	21873635.	IBA	Function
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0033235	positive regulation of protein sumoylation	-	ISO	Process
GO:0034613	cellular protein localization	-	ISO	Process
GO:0044389	ubiquitin-like protein ligase binding	21873635.	IBA	Function
GO:0045892	negative regulation of transcription, DNA-templated	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21931855.	IGI	Process
GO:0046965	retinoid X receptor binding	-	ISO	Function