EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000020745 (Gene tree)
Gene ID: 18472
Gene Symbol: Pafah1b1
Alias: LIS-1|Lis1|Mdsh|PAF-AH 45|Pafaha|lissencephaly-1 protein
Full Name: platelet-activating factor acetylhydrolase%2C isoform 1b%2C subunit 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 50722
Position: chr11: 74673949-74724670
Accession: 109520
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000021091	-	5803	-	ENSMUSP00000021091	410 (aa)	-	P63005
ENSMUST00000126341	-	8570	-	-	- (aa)	-	-
ENSMUST00000156794	-	7165	-	-	- (aa)	-	-
ENSMUST00000102520	-	5789	-	ENSMUSP00000099578	410 (aa)	-	P63005
ENSMUST00000155493	-	525	-	ENSMUSP00000118231	97 (aa)	-	Q5SW16

Gene Model

Click here to download ENSMUSG00000020745's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00565	Ether lipid metabolism	KEGG
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000020745's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000132	establishment of mitotic spindle orientation	21873635.	IBA	Process
GO:0000132	establishment of mitotic spindle orientation	-	ISO	Process
GO:0000226	microtubule cytoskeleton organization	16107726.	IGI	Process
GO:0000226	microtubule cytoskeleton organization	22073305.	IMP	Process
GO:0000235	astral microtubule	-	ISO	Component
GO:0000776	kinetochore	21873635.	IBA	Component
GO:0000776	kinetochore	-	ISO	Component
GO:0001667	ameboidal-type cell migration	22073305.	IMP	Process
GO:0001675	acrosome assembly	13129914.	IMP	Process
GO:0001764	neuron migration	12796778.16107726.	IGI	Process
GO:0001764	neuron migration	9697693.14507966.15331402.	IMP	Process
GO:0001764	neuron migration	-	ISO	Process
GO:0001961	positive regulation of cytokine-mediated signaling pathway	22073305.	IMP	Process
GO:0005515	protein binding	11231056.11940666.12796778.15939891.16203747.17997972.18331715.18983980.20360068.22073305.26496610.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005635	nuclear envelope	21873635.	IBA	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005635	nuclear envelope	18809722.	ISS	Component
GO:0005737	cytoplasm	12551946.12950100.	IDA	Component
GO:0005813	centrosome	11163259.11163260.	IDA	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005871	kinesin complex	-	ISO	Component
GO:0005874	microtubule	-	IEA	Component
GO:0005875	microtubule associated complex	21873635.	IBA	Component
GO:0005875	microtubule associated complex	11163259.	IDA	Component
GO:0005875	microtubule associated complex	-	ISO	Component
GO:0005881	cytoplasmic microtubule	21873635.	IBA	Component
GO:0005938	cell cortex	-	ISO	Component
GO:0006629	lipid metabolic process	-	IEA	Process
GO:0007017	microtubule-based process	-	ISO	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0007097	nuclear migration	21873635.	IBA	Process
GO:0007097	nuclear migration	-	ISO	Process
GO:0007268	chemical synaptic transmission	10729324.	IMP	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007399	nervous system development	-	IEA	Process
GO:0007405	neuroblast proliferation	12629176.	IMP	Process
GO:0007611	learning or memory	10541472.	IMP	Process
GO:0008017	microtubule binding	11163259.	IDA	Function
GO:0008017	microtubule binding	-	ISO	Function
GO:0008090	retrograde axonal transport	21873635.	IBA	Process
GO:0008090	retrograde axonal transport	11163259.	IDA	Process
GO:0008344	adult locomotory behavior	10541472.	IMP	Process
GO:0008344	adult locomotory behavior	-	ISO	Process
GO:0009306	protein secretion	22073305.	IMP	Process
GO:0010977	negative regulation of neuron projection development	-	ISO	Process
GO:0015630	microtubule cytoskeleton	13129914.	IDA	Component
GO:0015630	microtubule cytoskeleton	17314247.	IDA	Component
GO:0016020	membrane	-	IEA	Component
GO:0016042	lipid catabolic process	-	IEA	Process
GO:0016477	cell migration	12629176.	IMP	Process
GO:0017145	stem cell division	-	ISO	Process
GO:0019226	transmission of nerve impulse	17433713.	IMP	Process
GO:0021540	corpus callosum morphogenesis	-	ISO	Process
GO:0021766	hippocampus development	17330141.	IGI	Process
GO:0021766	hippocampus development	10729324.	IMP	Process
GO:0021819	layer formation in cerebral cortex	17330141.	IGI	Process
GO:0021895	cerebral cortex neuron differentiation	-	ISO	Process
GO:0021987	cerebral cortex development	18469343.	IGI	Process
GO:0021987	cerebral cortex development	11344260.	IMP	Process
GO:0021987	cerebral cortex development	-	ISO	Process
GO:0030036	actin cytoskeleton organization	14507966.	IMP	Process
GO:0030154	cell differentiation	-	IEA	Process
GO:0030424	axon	-	ISO	Component
GO:0030426	growth cone	-	ISO	Component
GO:0031023	microtubule organizing center organization	21873635.	IBA	Process
GO:0031023	microtubule organizing center organization	-	ISO	Process
GO:0031252	cell leading edge	14691133.	IDA	Component
GO:0031514	motile cilium	17314247.	IDA	Component
GO:0031982	vesicle	-	ISO	Component
GO:0032420	stereocilium	23533177.	IDA	Component
GO:0036035	osteoclast development	22073305.	IMP	Process
GO:0040019	positive regulation of embryonic development	23533177.	IMP	Process
GO:0042249	establishment of planar polarity of embryonic epithelium	23533177.	IMP	Process
GO:0042803	protein homodimerization activity	11344260.	IPI	Function
GO:0043005	neuron projection	21873635.	IBA	Component
GO:0043005	neuron projection	-	ISO	Component
GO:0043025	neuronal cell body	21873635.	IBA	Component
GO:0043025	neuronal cell body	-	ISO	Component
GO:0043087	regulation of GTPase activity	14507966.	IMP	Process
GO:0043622	cortical microtubule organization	21844209.	IMP	Process
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0045505	dynein intermediate chain binding	-	ISO	Function
GO:0045773	positive regulation of axon extension	-	ISO	Process
GO:0045931	positive regulation of mitotic cell cycle	-	ISO	Process
GO:0046329	negative regulation of JNK cascade	22073305.	IGI	Process
GO:0047496	vesicle transport along microtubule	21873635.	IBA	Process
GO:0047496	vesicle transport along microtubule	16107726.	IGI	Process
GO:0048471	perinuclear region of cytoplasm	14578885.	IDA	Component
GO:0048854	brain morphogenesis	21873635.	IBA	Process
GO:0048854	brain morphogenesis	-	ISO	Process
GO:0050885	neuromuscular process controlling balance	10541472.	IMP	Process
GO:0050885	neuromuscular process controlling balance	-	ISO	Process
GO:0051010	microtubule plus-end binding	21873635.	IBA	Function
GO:0051081	nuclear envelope disassembly	18809722.	IMP	Process
GO:0051130	positive regulation of cellular component organization	23533177.	IMP	Process
GO:0051219	phosphoprotein binding	14578885.	IPI	Function
GO:0051301	cell division	-	IEA	Process
GO:0051660	establishment of centrosome localization	-	ISO	Process
GO:0051661	maintenance of centrosome location	23533177.	IMP	Process
GO:0060117	auditory receptor cell development	23533177.	IMP	Process
GO:0061003	positive regulation of dendritic spine morphogenesis	23483716.	IMP	Process
GO:0070507	regulation of microtubule cytoskeleton organization	23533177.	IMP	Process
GO:0070840	dynein complex binding	21873635.	IBA	Function
GO:0070840	dynein complex binding	-	ISO	Function
GO:0090102	cochlea development	23533177.	IMP	Process
GO:0090176	microtubule cytoskeleton organization involved in establishment of planar polarity	23533177.	IMP	Process
GO:0090724	central region of growth cone	-	ISO	Component
GO:0097730	non-motile cilium	17314247.	IDA	Component
GO:2000574	regulation of microtubule motor activity	21873635.	IBA	Process