EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000102554	-	6684	XM_006532320	ENSMUSP00000099614	1100 (aa)	XP_006532383	O35071
ENSMUST00000094499	-	5168	XM_006532323	ENSMUSP00000092075	1100 (aa)	XP_006532386	O35071
ENSMUST00000072187	-	5046	-	ENSMUSP00000072048	1112 (aa)	-	E9Q9B0
ENSMUST00000137119	-	6596	-	ENSMUSP00000123242	1100 (aa)	-	O35071
ENSMUST00000152618	-	1943	-	ENSMUSP00000136258	425 (aa)	-	Q3V3Y9

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000020821	Kif1c	100	93.019	ENSG00000129250	KIF1C	100	97.826	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003777	microtubule motor activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005794	Golgi apparatus	11784862.	IDA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005871	kinesin complex	21873635.	IBA	Component
GO:0005874	microtubule	21873635.	IBA	Component
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	11784862.	IDA	Process
GO:0007018	microtubule-based movement	21873635.	IBA	Process
GO:0008017	microtubule binding	21873635.	IBA	Function
GO:0008574	ATP-dependent microtubule motor activity, plus-end-directed	21873635.	IBA	Function
GO:0016192	vesicle-mediated transport	21873635.	IBA	Process
GO:0016887	ATPase activity	21873635.	IBA	Function
GO:0030424	axon	21873635.	IBA	Component
GO:0030425	dendrite	21873635.	IBA	Component
GO:0030705	cytoskeleton-dependent intracellular transport	21873635.	IBA	Process
GO:0043005	neuron projection	21873635.	IBA	Component
GO:1990048	anterograde neuronal dense core vesicle transport	-	ISO	Process
GO:1990049	retrograde neuronal dense core vesicle transport	-	ISO	Process