EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021111 (Gene tree)
Gene ID: 18789
Gene Symbol: Papola
Alias: PapIII|Plap
Full Name: poly (A) polymerase alpha
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 54251 bases
Position: chr12:105784694-105838944
Accession: 109301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000125898	PAP_RNA-bind	PF04926.15	2e-25	1	1
ENSMUSP00000105527	PAP_RNA-bind	PF04926.15	1.4e-24	1	1
ENSMUSP00000126275	PAP_RNA-bind	PF04926.15	1.5e-24	1	1
ENSMUSP00000131668	PAP_RNA-bind	PF04926.15	1.5e-24	1	1
ENSMUSP00000132353	PAP_RNA-bind	PF04926.15	1.3e-23	1	1
ENSMUSP00000128402	PAP_RNA-bind	PF04926.15	8.4e-23	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000170002	-	2605	XM_006515593	ENSMUSP00000126275	718 (aa)	XP_006515656	E9PZR3
ENSMUST00000164798	-	966	-	ENSMUSP00000125898	322 (aa)	-	F7CXD5
ENSMUST00000166735	-	1033	-	ENSMUSP00000128908	293 (aa)	-	A0A0R4J244
ENSMUST00000169938	-	4356	-	ENSMUSP00000130687	168 (aa)	-	E9QAY4
ENSMUST00000166329	-	2223	-	ENSMUSP00000131725	111 (aa)	-	E9PVN7
ENSMUST00000109901	-	4380	XM_006515592	ENSMUSP00000105527	739 (aa)	XP_006515655	Q61183
ENSMUST00000169524	-	701	-	ENSMUSP00000130798	95 (aa)	-	F7DC29
ENSMUST00000163473	-	2544	-	ENSMUSP00000131668	693 (aa)	-	E9PWC8
ENSMUST00000170540	-	741	-	ENSMUSP00000130714	23 (aa)	-	E9QAN5
ENSMUST00000021535	-	3022	-	ENSMUSP00000021535	739 (aa)	-	Q61183
ENSMUST00000165584	-	809	-	-	- (aa)	-	-
ENSMUST00000172040	-	726	-	-	- (aa)	-	-
ENSMUST00000170831	-	295	-	-	- (aa)	-	-
ENSMUST00000172089	-	686	-	ENSMUSP00000131729	120 (aa)	-	F7AB38
ENSMUST00000164326	-	529	-	ENSMUSP00000125818	66 (aa)	-	E9Q5Z1
ENSMUST00000166498	-	2076	-	-	- (aa)	-	-
ENSMUST00000166471	-	1508	-	ENSMUSP00000132353	419 (aa)	-	F6VTN8
ENSMUST00000168186	-	2436	XM_006515594	ENSMUSP00000128402	732 (aa)	XP_006515657	E9QAN2
ENSMUST00000163805	-	1170	-	-	- (aa)	-	-
ENSMUST00000170189	-	581	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021111's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000021111	Papola	98	61.224	ENSMUSG00000020273	Papolg	97	81.884
ENSMUSG00000021111	Papola	93	85.848	ENSMUSG00000074817	Papolb	99	85.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021111	Papola	100	95.442	ENSG00000090060	PAPOLA	98	99.283	Homo_sapiens
ENSMUSG00000021111	Papola	99	95.935	ENSAMEG00000014142	PAPOLA	99	95.935	Ailuropoda_melanoleuca
ENSMUSG00000021111	Papola	99	90.379	ENSAPLG00000006645	PAPOLA	99	90.379	Anas_platyrhynchos
ENSMUSG00000021111	Papola	99	92.236	ENSACAG00000013474	PAPOLA	99	95.144	Anolis_carolinensis
ENSMUSG00000021111	Papola	99	96.527	ENSANAG00000018274	PAPOLA	99	98.346	Aotus_nancymaae
ENSMUSG00000021111	Papola	77	91.011	ENSANAG00000027941	-	98	91.011	Aotus_nancymaae
ENSMUSG00000021111	Papola	100	73.257	ENSAMXG00000018141	papola	99	84.740	Astyanax_mexicanus
ENSMUSG00000021111	Papola	100	97.258	ENSBTAG00000004054	PAPOLA	100	97.258	Bos_taurus
ENSMUSG00000021111	Papola	100	96.280	ENSCJAG00000006512	PAPOLA	99	98.346	Callithrix_jacchus
ENSMUSG00000021111	Papola	100	95.570	ENSCAFG00000017783	PAPOLA	100	95.570	Canis_familiaris
ENSMUSG00000021111	Papola	100	96.076	ENSCAFG00020011550	PAPOLA	100	96.076	Canis_lupus_dingo
ENSMUSG00000021111	Papola	100	95.805	ENSCHIG00000025004	-	100	95.805	Capra_hircus
ENSMUSG00000021111	Papola	99	96.377	ENSTSYG00000012384	PAPOLA	99	96.377	Carlito_syrichta
ENSMUSG00000021111	Papola	99	94.099	ENSCPOG00000002648	PAPOLA	100	92.496	Cavia_porcellus
ENSMUSG00000021111	Papola	100	95.304	ENSCCAG00000025120	PAPOLA	98	97.782	Cebus_capucinus
ENSMUSG00000021111	Papola	100	95.442	ENSCATG00000018815	PAPOLA	99	98.696	Cercocebus_atys
ENSMUSG00000021111	Papola	100	96.681	ENSCLAG00000016342	PAPOLA	100	96.681	Chinchilla_lanigera
ENSMUSG00000021111	Papola	100	95.436	ENSCSAG00000010516	PAPOLA	100	95.436	Chlorocebus_sabaeus
ENSMUSG00000021111	Papola	85	79.564	ENSCHOG00000001115	PAPOLA	72	81.818	Choloepus_hoffmanni
ENSMUSG00000021111	Papola	100	92.568	ENSCPBG00000024125	PAPOLA	100	92.568	Chrysemys_picta_bellii
ENSMUSG00000021111	Papola	99	92.683	ENSCANG00000000159	PAPOLA	100	90.175	Colobus_angolensis_palliatus
ENSMUSG00000021111	Papola	99	87.267	ENSCGRG00001002732	-	99	85.908	Cricetulus_griseus_chok1gshd
ENSMUSG00000021111	Papola	100	98.701	ENSCGRG00001022693	-	100	98.701	Cricetulus_griseus_chok1gshd
ENSMUSG00000021111	Papola	99	92.547	ENSCGRG00001000229	-	100	90.122	Cricetulus_griseus_chok1gshd
ENSMUSG00000021111	Papola	100	97.976	ENSCGRG00000003664	-	100	98.696	Cricetulus_griseus_crigri
ENSMUSG00000021111	Papola	98	82.231	ENSCGRG00000001888	-	96	82.369	Cricetulus_griseus_crigri
ENSMUSG00000021111	Papola	99	92.236	ENSCGRG00000000257	-	100	85.552	Cricetulus_griseus_crigri
ENSMUSG00000021111	Papola	69	53.846	ENSCSEG00000001841	-	71	53.846	Cynoglossus_semilaevis
ENSMUSG00000021111	Papola	100	70.937	ENSDARG00000009585	papola	100	70.799	Danio_rerio
ENSMUSG00000021111	Papola	99	94.393	ENSDORG00000013415	-	100	89.831	Dipodomys_ordii
ENSMUSG00000021111	Papola	99	84.472	ENSETEG00000004889	PAPOLA	100	82.632	Echinops_telfairi
ENSMUSG00000021111	Papola	100	69.221	ENSELUG00000018972	papola	100	68.966	Esox_lucius
ENSMUSG00000021111	Papola	100	97.547	ENSFCAG00000006784	PAPOLA	100	97.547	Felis_catus
ENSMUSG00000021111	Papola	99	93.750	ENSFALG00000002547	PAPOLA	98	87.368	Ficedula_albicollis
ENSMUSG00000021111	Papola	99	95.217	ENSFDAG00000010370	PAPOLA	100	95.217	Fukomys_damarensis
ENSMUSG00000021111	Papola	99	62.848	ENSGMOG00000010209	papola	100	66.910	Gadus_morhua
ENSMUSG00000021111	Papola	100	89.986	ENSGALG00000033099	PAPOLA	100	89.986	Gallus_gallus
ENSMUSG00000021111	Papola	69	53.958	ENSGACG00000006142	-	100	53.542	Gasterosteus_aculeatus
ENSMUSG00000021111	Papola	96	94.864	ENSGAGG00000020500	PAPOLA	99	94.864	Gopherus_agassizii
ENSMUSG00000021111	Papola	100	95.442	ENSGGOG00000006287	PAPOLA	100	95.442	Gorilla_gorilla
ENSMUSG00000021111	Papola	99	83.230	ENSHGLG00000017457	-	100	82.561	Heterocephalus_glaber_female
ENSMUSG00000021111	Papola	99	82.919	ENSHGLG00000007467	-	100	77.131	Heterocephalus_glaber_female
ENSMUSG00000021111	Papola	100	96.104	ENSHGLG00000007909	-	100	96.104	Heterocephalus_glaber_female
ENSMUSG00000021111	Papola	100	95.960	ENSHGLG00100017273	PAPOLA	100	95.960	Heterocephalus_glaber_male
ENSMUSG00000021111	Papola	100	68.441	ENSIPUG00000005919	papola	100	68.274	Ictalurus_punctatus
ENSMUSG00000021111	Papola	100	97.258	ENSSTOG00000011471	PAPOLA	100	97.258	Ictidomys_tridecemlineatus
ENSMUSG00000021111	Papola	99	96.522	ENSJJAG00000024340	Papola	100	96.522	Jaculus_jaculus
ENSMUSG00000021111	Papola	99	76.653	ENSLACG00000018136	PAPOLA	99	76.653	Latimeria_chalumnae
ENSMUSG00000021111	Papola	99	66.220	ENSLOCG00000008632	papola	99	66.265	Lepisosteus_oculatus
ENSMUSG00000021111	Papola	99	94.973	ENSLAFG00000000946	PAPOLA	99	94.973	Loxodonta_africana
ENSMUSG00000021111	Papola	100	95.442	ENSMFAG00000001792	PAPOLA	99	98.521	Macaca_fascicularis
ENSMUSG00000021111	Papola	100	95.436	ENSMMUG00000018610	PAPOLA	100	96.270	Macaca_mulatta
ENSMUSG00000021111	Papola	100	95.442	ENSMNEG00000043747	PAPOLA	99	97.426	Macaca_nemestrina
ENSMUSG00000021111	Papola	100	95.442	ENSMLEG00000032066	PAPOLA	100	95.442	Mandrillus_leucophaeus
ENSMUSG00000021111	Papola	99	88.820	ENSMGAG00000013228	-	100	89.050	Meleagris_gallopavo
ENSMUSG00000021111	Papola	100	98.557	ENSMAUG00000017178	Papola	100	98.557	Mesocricetus_auratus
ENSMUSG00000021111	Papola	100	97.118	ENSMICG00000010347	PAPOLA	100	97.118	Microcebus_murinus
ENSMUSG00000021111	Papola	100	98.990	ENSMOCG00000021670	Papola	100	98.990	Microtus_ochrogaster
ENSMUSG00000021111	Papola	99	81.111	ENSMODG00000001969	-	99	81.111	Monodelphis_domestica
ENSMUSG00000021111	Papola	100	95.264	ENSMODG00000012887	-	100	95.264	Monodelphis_domestica
ENSMUSG00000021111	Papola	100	99.423	MGP_CAROLIEiJ_G0018093	Papola	100	99.423	Mus_caroli
ENSMUSG00000021111	Papola	100	100.000	MGP_PahariEiJ_G0029850	Papola	100	100.000	Mus_pahari
ENSMUSG00000021111	Papola	100	99.865	MGP_SPRETEiJ_G0018943	Papola	100	99.865	Mus_spretus
ENSMUSG00000021111	Papola	100	96.752	ENSMPUG00000003054	PAPOLA	100	96.752	Mustela_putorius_furo
ENSMUSG00000021111	Papola	100	94.181	ENSMLUG00000010922	PAPOLA	100	94.181	Myotis_lucifugus
ENSMUSG00000021111	Papola	100	97.258	ENSNGAG00000022172	Papola	100	97.258	Nannospalax_galili
ENSMUSG00000021111	Papola	99	90.793	ENSNLEG00000000625	PAPOLA	100	90.793	Nomascus_leucogenys
ENSMUSG00000021111	Papola	74	95.082	ENSMEUG00000007831	-	74	86.614	Notamacropus_eugenii
ENSMUSG00000021111	Papola	99	92.260	ENSOPRG00000007625	PAPOLA	100	90.291	Ochotona_princeps
ENSMUSG00000021111	Papola	68	54.008	ENSONIG00000001062	-	96	54.008	Oreochromis_niloticus
ENSMUSG00000021111	Papola	99	96.671	ENSOANG00000013812	PAPOLA	99	96.671	Ornithorhynchus_anatinus
ENSMUSG00000021111	Papola	99	92.944	ENSOCUG00000011531	PAPOLA	99	92.944	Oryctolagus_cuniculus
ENSMUSG00000021111	Papola	100	96.351	ENSOGAG00000004611	PAPOLA	100	96.351	Otolemur_garnettii
ENSMUSG00000021111	Papola	100	96.346	ENSOARG00000016579	-	100	96.346	Ovis_aries
ENSMUSG00000021111	Papola	100	95.442	ENSPPAG00000030505	PAPOLA	100	95.442	Pan_paniscus
ENSMUSG00000021111	Papola	100	96.617	ENSPPRG00000008616	PAPOLA	100	96.617	Panthera_pardus
ENSMUSG00000021111	Papola	99	96.603	ENSPTIG00000018852	PAPOLA	99	96.603	Panthera_tigris_altaica
ENSMUSG00000021111	Papola	100	95.442	ENSPTRG00000006704	PAPOLA	100	95.442	Pan_troglodytes
ENSMUSG00000021111	Papola	100	95.442	ENSPANG00000025582	PAPOLA	98	98.696	Papio_anubis
ENSMUSG00000021111	Papola	96	74.208	ENSPKIG00000014471	papola	100	70.748	Paramormyrops_kingsleyae
ENSMUSG00000021111	Papola	100	93.108	ENSPSIG00000014157	PAPOLA	87	93.108	Pelodiscus_sinensis
ENSMUSG00000021111	Papola	100	98.846	ENSPEMG00000000043	Papola	100	98.846	Peromyscus_maniculatus_bairdii
ENSMUSG00000021111	Papola	100	95.000	ENSPCIG00000013234	PAPOLA	100	95.779	Phascolarctos_cinereus
ENSMUSG00000021111	Papola	100	93.020	ENSPPYG00000006128	PAPOLA	100	93.020	Pongo_abelii
ENSMUSG00000021111	Papola	99	90.373	ENSPCAG00000004199	PAPOLA	100	90.549	Procavia_capensis
ENSMUSG00000021111	Papola	99	94.099	ENSPCOG00000022117	PAPOLA	99	93.343	Propithecus_coquereli
ENSMUSG00000021111	Papola	100	95.129	ENSPVAG00000013925	PAPOLA	100	95.129	Pteropus_vampyrus
ENSMUSG00000021111	Papola	100	72.214	ENSPNAG00000010467	papola	100	72.380	Pygocentrus_nattereri
ENSMUSG00000021111	Papola	100	98.647	ENSRNOG00000004827	Papola	100	98.647	Rattus_norvegicus
ENSMUSG00000021111	Papola	99	95.839	ENSRBIG00000038490	PAPOLA	100	95.839	Rhinopithecus_bieti
ENSMUSG00000021111	Papola	100	95.442	ENSRROG00000025545	PAPOLA	100	95.442	Rhinopithecus_roxellana
ENSMUSG00000021111	Papola	99	96.126	ENSSBOG00000024061	PAPOLA	100	96.126	Saimiri_boliviensis_boliviensis
ENSMUSG00000021111	Papola	99	94.701	ENSSHAG00000015211	PAPOLA	99	94.701	Sarcophilus_harrisii
ENSMUSG00000021111	Papola	100	70.862	ENSSFOG00015004431	papola	99	84.629	Scleropages_formosus
ENSMUSG00000021111	Papola	98	47.214	ENSSDUG00000018247	-	97	46.552	Seriola_dumerili
ENSMUSG00000021111	Papola	100	92.162	ENSSPUG00000005835	PAPOLA	100	92.162	Sphenodon_punctatus
ENSMUSG00000021111	Papola	100	97.258	ENSSSCG00000002505	-	100	97.258	Sus_scrofa
ENSMUSG00000021111	Papola	99	90.231	ENSTGUG00000012687	PAPOLA	99	90.231	Taeniopygia_guttata
ENSMUSG00000021111	Papola	75	87.772	ENSTBEG00000000194	PAPOLA	75	87.772	Tupaia_belangeri
ENSMUSG00000021111	Papola	79	96.875	ENSTTRG00000005717	PAPOLA	74	96.875	Tursiops_truncatus
ENSMUSG00000021111	Papola	61	98.815	ENSUAMG00000025737	PAPOLA	98	98.815	Ursus_americanus
ENSMUSG00000021111	Papola	99	95.652	ENSVPAG00000006464	PAPOLA	100	95.652	Vicugna_pacos
ENSMUSG00000021111	Papola	100	97.258	ENSVVUG00000028340	PAPOLA	100	97.258	Vulpes_vulpes
ENSMUSG00000021111	Papola	100	83.627	ENSXETG00000013949	papola	100	83.627	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004652	polynucleotide adenylyltransferase activity	21873635.	IBA	Function
GO:0004652	polynucleotide adenylyltransferase activity	18084034.	IDA	Function
GO:0004652	polynucleotide adenylyltransferase activity	-	ISO	Function
GO:0005515	protein binding	11716503.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006378	mRNA polyadenylation	21873635.	IBA	Process
GO:0006378	mRNA polyadenylation	-	ISO	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0016779	nucleotidyltransferase activity	-	IEA	Function
GO:0031123	RNA 3'-end processing	-	IEA	Process
GO:0031440	regulation of mRNA 3'-end processing	-	ISO	Process
GO:0043631	RNA polyadenylation	18084034.	IDA	Process
GO:0046872	metal ion binding	-	IEA	Function