EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021136 (Gene tree)
Gene ID: 64075
Gene Symbol: Smoc1
Alias: 2600002F22Rik|SPARC-related protein|SRG
Full Name: SPARC related modular calcium binding 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 159607
Position: chr12: 81026808-81186414
Accession: 1929878
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000110347	-	3496	XM_006516135	ENSMUSP00000105976	463 (aa)	XP_006516198	A0A0R4J1E4
ENSMUST00000129362	-	3385	-	ENSMUSP00000122858	434 (aa)	-	D3Z3A3
ENSMUST00000021564	-	3439	-	ENSMUSP00000021564	452 (aa)	-	E9QKW2

Gene Model

Click here to download ENSMUSG00000021136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021136's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001654	eye development	21194678.	IMP	Process
GO:0001654	eye development	-	ISO	Process
GO:0005509	calcium ion binding	-	IEA	Function
GO:0005576	extracellular region	-	IEA	Component
GO:0005604	basement membrane	18757743.	IDA	Component
GO:0007275	multicellular organism development	-	IEA	Process
GO:0010811	positive regulation of cell-substrate adhesion	18757743.	IDA	Process
GO:0030154	cell differentiation	-	IEA	Process
GO:0030198	extracellular matrix organization	18757743.	IDA	Process
GO:0045667	regulation of osteoblast differentiation	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0050840	extracellular matrix binding	18757743.	IDA	Function
GO:0060173	limb development	21194678.	IMP	Process
GO:0060173	limb development	-	ISO	Process