EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021193 (Gene tree)
Gene ID: 69617
Gene Symbol: Pitrm1
Alias: 2310012C15Rik|MP-1|Ntup1|PreP
Full Name: pitrilysin metallepetidase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 32367
Position: chr13: 6548149-6580515
Accession: 1916867
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000222485	-	3906	XM_006516508	ENSMUSP00000152229	1036 (aa)	XP_006516572	Q8K411
ENSMUST00000021611	-	3318	-	ENSMUSP00000021611	997 (aa)	-	Q8K411
ENSMUST00000221911	-	440	-	ENSMUSP00000152053	93 (aa)	-	A0A1Y7VMS3
ENSMUST00000220454	-	778	-	ENSMUSP00000152176	46 (aa)	-	A0A1Y7VN02
ENSMUST00000221120	-	486	-	ENSMUSP00000152183	65 (aa)	-	A0A1Y7VIW4
ENSMUST00000221431	-	495	-	-	- (aa)	-	-
ENSMUST00000222061	-	445	-	-	- (aa)	-	-
ENSMUST00000223492	-	899	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021193's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021193	Pitrm1	97	40.258	FBgn0033005	CG3107	94	40.258	Drosophila_melanogaster
ENSMUSG00000021193	Pitrm1	100	86.596	ENSG00000107959	PITRM1	100	86.596	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0004222	metalloendopeptidase activity	21873635.	IBA	Function
GO:0004222	metalloendopeptidase activity	-	ISO	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005759	mitochondrial matrix	21873635.	IBA	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0006508	proteolysis	-	ISO	Process
GO:0008233	peptidase activity	-	IEA	Function
GO:0008237	metallopeptidase activity	-	ISO	Function
GO:0008270	zinc ion binding	-	ISO	Function
GO:0016485	protein processing	21873635.	IBA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function