EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021244 (Gene tree)
Gene ID: 56531
Gene Symbol: Ylpm1
Alias: A930013E17Rik|ZAP|Zap3
Full Name: YLP motif containing 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 74195
Position: chr12: 84996321-85070515
Accession: 1926195
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000164558	-	5416	-	ENSMUSP00000126347	1577 (aa)	-	F6YTL8
ENSMUST00000101202	-	4605	-	ENSMUSP00000098763	1386 (aa)	-	Q9R0I7
ENSMUST00000167838	-	812	-	-	- (aa)	-	-
ENSMUST00000166605	-	915	-	-	- (aa)	-	-
ENSMUST00000168977	-	4893	XM_006516101	ENSMUSP00000128962	1433 (aa)	XP_006516164	E9Q803
ENSMUST00000021670	-	7003	XM_006516100	ENSMUSP00000021670	2139 (aa)	XP_006516163	D3YWX2
ENSMUST00000165803	-	596	-	-	- (aa)	-	-
ENSMUST00000169150	-	3002	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021244's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021244	Ylpm1	100	86.938	ENSG00000119596	YLPM1	100	93.098	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	15511642.	IDA	Process
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	15511642.	IDA	Function
GO:0005515	protein binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	11555636.15511642.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0032204	regulation of telomere maintenance	15100092.	IDA	Process