EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021248 (Gene tree)
Gene ID: 68581
Gene Symbol: Tmed10
Alias: 1110014C03Rik|p23|p24delta1
Full Name: transmembrane p24 trafficking protein 10
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 34234
Position: chr12: 85340614-85374847
Accession: 1915831
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000222585	-	619	-	ENSMUSP00000152811	116 (aa)	-	A0A1Y7VM54
ENSMUST00000222529	-	3181	-	-	- (aa)	-	-
ENSMUST00000040766	-	1482	-	ENSMUSP00000037583	219 (aa)	-	Q9D1D4
ENSMUST00000223375	-	2361	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021248's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021248	Tmed10	99	68.376	FBgn0045866	bai	99	55.072	Drosophila_melanogaster
ENSMUSG00000021248	Tmed10	100	100.000	ENSG00000170348	TMED10	100	92.694	Homo_sapiens
ENSMUSG00000021248	Tmed10	98	48.276	YML012W		97	37.681	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	21873635.	IBA	Component
GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	-	ISO	Component
GO:0005794	Golgi apparatus	21873635.	IBA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005801	cis-Golgi network	-	ISO	Component
GO:0005801	cis-Golgi network	17101722.	ISS	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006886	intracellular protein transport	-	ISO	Process
GO:0006886	intracellular protein transport	17101722.	TAS	Process
GO:0006888	ER to Golgi vesicle-mediated transport	21873635.	IBA	Process
GO:0007030	Golgi organization	21873635.	IBA	Process
GO:0007030	Golgi organization	10660306.	IDA	Process
GO:0007030	Golgi organization	-	ISO	Process
GO:0015031	protein transport	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	ISO	Component
GO:0016192	vesicle-mediated transport	-	IEA	Process
GO:0019905	syntaxin binding	-	ISO	Function
GO:0030134	COPII-coated ER to Golgi transport vesicle	21873635.	IBA	Component
GO:0030137	COPI-coated vesicle	21873635.	IBA	Component
GO:0030137	COPI-coated vesicle	-	ISO	Component
GO:0030667	secretory granule membrane	17101722.	IDA	Component
GO:0031410	cytoplasmic vesicle	-	IEA	Component
GO:0035964	COPI-coated vesicle budding	-	ISO	Process
GO:0042589	zymogen granule membrane	17101722.	IDA	Component
GO:0042589	zymogen granule membrane	-	ISO	Component
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0045055	regulated exocytosis	17101722.	IEP	Process
GO:0048199	vesicle targeting, to, from or within Golgi	17101722.	IEP	Process
GO:0051259	protein complex oligomerization	-	ISO	Process
GO:0070765	gamma-secretase complex	-	ISO	Component
GO:1902003	regulation of amyloid-beta formation	-	ISO	Process